RNA–Protein interactions for RNA: ENST00000478619.1

RASSF1-206, Transcript of Ras association domain family member 1, humanhuman

TSL 2

Gene RASSF1, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF1-206ENST00000478619 NISCHQ9Y2I1 1504 aa50.08■■■■■ 5.61
RASSF1-206ENST00000478619 CCDC180Q9P1Z9 1646 aa43.36■■■■■ 4.53
RASSF1-206ENST00000478619 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
RASSF1-206ENST00000478619 ABCC9O60706 1549 aa41.55■■■■■ 4.24
RASSF1-206ENST00000478619 DCAF1Q9Y4B6 1507 aa41.43■■■■■ 4.22
RASSF1-206ENST00000478619 DCAF8L2P0C7V8 631 aa41.27■■■■■ 4.2
RASSF1-206ENST00000478619 SHROOM4Q9ULL8 1493 aa41.24■■■■■ 4.19
RASSF1-206ENST00000478619 MYO15BQ96JP2 1530 aa40.73■■■■■ 4.11
RASSF1-206ENST00000478619 NACADO15069 1562 aa40.38■■■■■ 4.05
RASSF1-206ENST00000478619 RB1CC1Q8TDY2 1594 aa40.17■■■■■ 4.02
RASSF1-206ENST00000478619 SUPT5HO00267 1087 aaKnown RBP39.98■■■■□ 3.99
RASSF1-206ENST00000478619 SCRIBQ14160 1630 aa39.96■■■■□ 3.99
RASSF1-206ENST00000478619 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
RASSF1-206ENST00000478619 PABPN1Q86U42 306 aaKnown RBP eCLIP39.2■■■■□ 3.87
RASSF1-206ENST00000478619 RSF1Q96T23 1441 aaPredicted RBP39.09■■■■□ 3.85
RASSF1-206ENST00000478619 BICRAQ9NZM4 1560 aa39.07■■■■□ 3.84
RASSF1-206ENST00000478619 CECR2Q9BXF3 1484 aa38.86■■■■□ 3.81
RASSF1-206ENST00000478619 MROH2BQ7Z745 1585 aa38.7■■■■□ 3.79
RASSF1-206ENST00000478619 CHIC1Q5VXU3 224 aa38.62■■■■□ 3.77
RASSF1-206ENST00000478619 BAZ1AQ9NRL2 1556 aaPredicted RBP38.62■■■■□ 3.77
RASSF1-206ENST00000478619 WIZO95785 1651 aa38.4■■■■□ 3.74
RASSF1-206ENST00000478619 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
RASSF1-206ENST00000478619 TOP2AP11388 1531 aaKnown RBP38.05■■■■□ 3.68
RASSF1-206ENST00000478619 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
RASSF1-206ENST00000478619 PEG3Q9GZU2 1588 aa37.89■■■■□ 3.66
RASSF1-206ENST00000478619 SMARCA2P51531 1590 aa37.7■■■■□ 3.63
RASSF1-206ENST00000478619 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
RASSF1-206ENST00000478619 ATAD2BQ9ULI0 1458 aa37.61■■■■□ 3.61
RASSF1-206ENST00000478619 TRIM41Q8WV44 630 aa37.57■■■■□ 3.6
RASSF1-206ENST00000478619 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.6
RASSF1-206ENST00000478619 BAZ1BQ9UIG0 1483 aaKnown RBP37.41■■■■□ 3.58
RASSF1-206ENST00000478619 NCAPD3P42695 1498 aa37.33■■■■□ 3.57
RASSF1-206ENST00000478619 DNAJC5BQ9UF47 199 aa37.25■■■■□ 3.55
RASSF1-206ENST00000478619 HMGXB3Q12766 1538 aa37.17■■■■□ 3.54
RASSF1-206ENST00000478619 LOC105371045A0A1W2PR82 267 aa37.14■■■■□ 3.54
RASSF1-206ENST00000478619 ABCC8Q09428 1581 aa37.04■■■■□ 3.52
RASSF1-206ENST00000478619 FAM9AQ8IZU1 332 aaPredicted RBP36.87■■■■□ 3.49
RASSF1-206ENST00000478619 WRNQ14191 1432 aaPredicted RBP eCLIP36.77■■■■□ 3.48
RASSF1-206ENST00000478619 EEA1Q15075 1411 aa36.59■■■■□ 3.45
RASSF1-206ENST00000478619 SYNJ1O43426 1573 aa36.58■■■■□ 3.45
RASSF1-206ENST00000478619 CFTRP13569 1480 aa36.53■■■■□ 3.44
RASSF1-206ENST00000478619 SOGA1O94964 1423 aa36.5■■■■□ 3.43
RASSF1-206ENST00000478619 TOP2BQ02880 1626 aa36.39■■■■□ 3.42
RASSF1-206ENST00000478619 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
RASSF1-206ENST00000478619 NESP48681 1621 aa36.35■■■■□ 3.41
RASSF1-206ENST00000478619 BIVM-ERCC5R4GMW8 1640 aa36.33■■■■□ 3.41
RASSF1-206ENST00000478619 RUSC2Q8N2Y8 1516 aa36.31■■■■□ 3.4
RASSF1-206ENST00000478619 CSRNP3Q8WYN3 585 aa36.31■■■■□ 3.4
RASSF1-206ENST00000478619 PRDM2Q13029 1718 aa36.3■■■■□ 3.4
RASSF1-206ENST00000478619 EHMT2Q96KQ7 1210 aa36.3■■■■□ 3.4
RASSF1-206ENST00000478619 CUX1P39880 1505 aa36.16■■■■□ 3.38
RASSF1-206ENST00000478619 TNIKQ9UKE5 1360 aa36.11■■■■□ 3.37
RASSF1-206ENST00000478619 LAMC3Q9Y6N6 1575 aa36.09■■■■□ 3.37
RASSF1-206ENST00000478619 GOLGA3Q08378 1498 aa36.09■■■■□ 3.37
RASSF1-206ENST00000478619 PCGF6Q9BYE7 350 aa36.06■■■■□ 3.36
RASSF1-206ENST00000478619 KIF21BO75037 1637 aa36.05■■■■□ 3.36
RASSF1-206ENST00000478619 CEP164Q9UPV0 1460 aa36.03■■■■□ 3.36
RASSF1-206ENST00000478619 FANCD2Q9BXW9 1451 aa35.98■■■■□ 3.35
RASSF1-206ENST00000478619 TRIM26Q12899 539 aaPredicted RBP35.95■■■■□ 3.35
RASSF1-206ENST00000478619 CEP162Q5TB80 1403 aa35.93■■■■□ 3.34
RASSF1-206ENST00000478619 PDS5BQ9NTI5 1447 aa35.88■■■■□ 3.33
RASSF1-206ENST00000478619 UBTFP17480 764 aaKnown RBP35.87■■■■□ 3.33
RASSF1-206ENST00000478619 KIF21AQ7Z4S6 1674 aa35.8■■■■□ 3.32
RASSF1-206ENST00000478619 KIF27Q86VH2 1401 aa35.8■■■■□ 3.32
RASSF1-206ENST00000478619 RAPGEF2Q9Y4G8 1499 aa35.73■■■■□ 3.31
RASSF1-206ENST00000478619 PRXQ9BXM0 1461 aa35.71■■■■□ 3.31
RASSF1-206ENST00000478619 ERICH3Q5RHP9 1530 aa35.71■■■■□ 3.31
RASSF1-206ENST00000478619 FGD5Q6ZNL6 1462 aa35.66■■■■□ 3.3
RASSF1-206ENST00000478619 DNMBPQ6XZF7 1577 aa35.65■■■■□ 3.3
RASSF1-206ENST00000478619 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
RASSF1-206ENST00000478619 URB2Q14146 1524 aaKnown RBP35.59■■■■□ 3.29
RASSF1-206ENST00000478619 HRCP23327 699 aa35.55■■■■□ 3.28
RASSF1-206ENST00000478619 CUX2O14529 1486 aa35.55■■■■□ 3.28
RASSF1-206ENST00000478619 TOPBP1Q92547 1522 aa35.54■■■■□ 3.28
RASSF1-206ENST00000478619 CLIP1P30622 1438 aa35.53■■■■□ 3.28
RASSF1-206ENST00000478619 MRC2Q9UBG0 1479 aa35.44■■■■□ 3.26
RASSF1-206ENST00000478619 IGF1RP08069 1367 aa35.42■■■■□ 3.26
RASSF1-206ENST00000478619 POLA1P09884 1462 aaPredicted RBP35.42■■■■□ 3.26
RASSF1-206ENST00000478619 ABCA10Q8WWZ4 1543 aa35.39■■■■□ 3.26
RASSF1-206ENST00000478619 PPARGC1BQ86YN6 1023 aaKnown RBP35.31■■■■□ 3.24
RASSF1-206ENST00000478619 VPS8Q8N3P4 1428 aa35.31■■■■□ 3.24
RASSF1-206ENST00000478619 RAD54L2Q9Y4B4 1467 aa35.31■■■■□ 3.24
RASSF1-206ENST00000478619 THOC2Q8NI27 1593 aaKnown RBP35.29■■■■□ 3.24
RASSF1-206ENST00000478619 WDR62O43379 1518 aa35.26■■■■□ 3.23
RASSF1-206ENST00000478619 CARMIL1Q5VZK9 1371 aa35.25■■■■□ 3.23
RASSF1-206ENST00000478619 WDR97A6NE52 1622 aa35.17■■■■□ 3.22
RASSF1-206ENST00000478619 ARAP1Q96P48 1450 aa35.1■■■■□ 3.21
RASSF1-206ENST00000478619 CUL7Q14999 1698 aa35.07■■■■□ 3.2
RASSF1-206ENST00000478619 RANGAP1P46060 587 aaPredicted RBP35.07■■■■□ 3.2
RASSF1-206ENST00000478619 TDRD9Q8NDG6 1382 aaKnown RBP35.03■■■■□ 3.2
RASSF1-206ENST00000478619 TARBP1Q13395 1621 aaKnown RBP35.03■■■■□ 3.2
RASSF1-206ENST00000478619 ABCA5Q8WWZ7 1642 aa35.03■■■■□ 3.2
RASSF1-206ENST00000478619 ARHGAP35Q9NRY4 1499 aa34.99■■■■□ 3.19
RASSF1-206ENST00000478619 APLP2Q06481 763 aa34.96■■■■□ 3.19
RASSF1-206ENST00000478619 GAPVD1Q14C86 1478 aa34.93■■■■□ 3.18
RASSF1-206ENST00000478619 IFT140Q96RY7 1462 aa34.92■■■■□ 3.18
RASSF1-206ENST00000478619 TTBK1Q5TCY1 1321 aaPredicted RBP34.9■■■■□ 3.18
RASSF1-206ENST00000478619 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
RASSF1-206ENST00000478619 AQRO60306 1485 aaKnown RBP eCLIP34.88■■■■□ 3.174e-7■□□□□ 11.2
RASSF1-206ENST00000478619 ZEB1P37275 1124 aaPredicted RBP34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms