RNA–Protein interactions for RNA: ENST00000478393.5

ACTR3C-204, Transcript of ARP3 actin related protein 3 homolog C, humanhuman

TSL 1 (best)

Gene ACTR3C, Length 5,697 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3C-204ENST00000478393 NISCHQ9Y2I1 1504 aa20.87■□□□□ 0.93
ACTR3C-204ENST00000478393 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
ACTR3C-204ENST00000478393 SUPT5HO00267 1087 aaKnown RBP18.56■□□□□ 0.56
ACTR3C-204ENST00000478393 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
ACTR3C-204ENST00000478393 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
ACTR3C-204ENST00000478393 APLP2Q06481 763 aa18.1■□□□□ 0.49
ACTR3C-204ENST00000478393 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
ACTR3C-204ENST00000478393 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
ACTR3C-204ENST00000478393 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
ACTR3C-204ENST00000478393 ABCC9O60706 1549 aa17.53■□□□□ 0.4
ACTR3C-204ENST00000478393 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.39
ACTR3C-204ENST00000478393 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
ACTR3C-204ENST00000478393 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
ACTR3C-204ENST00000478393 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.36
ACTR3C-204ENST00000478393 NACADO15069 1562 aa17.21■□□□□ 0.35
ACTR3C-204ENST00000478393 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
ACTR3C-204ENST00000478393 DCAF1Q9Y4B6 1507 aa17.1■□□□□ 0.33
ACTR3C-204ENST00000478393 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
ACTR3C-204ENST00000478393 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
ACTR3C-204ENST00000478393 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
ACTR3C-204ENST00000478393 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
ACTR3C-204ENST00000478393 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
ACTR3C-204ENST00000478393 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
ACTR3C-204ENST00000478393 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
ACTR3C-204ENST00000478393 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
ACTR3C-204ENST00000478393 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
ACTR3C-204ENST00000478393 MYO15BQ96JP2 1530 aa16.81■□□□□ 0.28
ACTR3C-204ENST00000478393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
ACTR3C-204ENST00000478393 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
ACTR3C-204ENST00000478393 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
ACTR3C-204ENST00000478393 MYT1LQ9UL68 1186 aa16.62■□□□□ 0.25
ACTR3C-204ENST00000478393 EEA1Q15075 1411 aa16.59■□□□□ 0.25
ACTR3C-204ENST00000478393 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
ACTR3C-204ENST00000478393 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
ACTR3C-204ENST00000478393 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
ACTR3C-204ENST00000478393 NEFLP07196 543 aa16.54■□□□□ 0.24
ACTR3C-204ENST00000478393 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
ACTR3C-204ENST00000478393 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
ACTR3C-204ENST00000478393 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
ACTR3C-204ENST00000478393 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.21
ACTR3C-204ENST00000478393 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
ACTR3C-204ENST00000478393 ERICH6Q7L0X2 663 aa16.28■□□□□ 0.2
ACTR3C-204ENST00000478393 ITGAEP38570 1179 aa16.27■□□□□ 0.19
ACTR3C-204ENST00000478393 FBLN2P98095 1184 aa16.27■□□□□ 0.19
ACTR3C-204ENST00000478393 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
ACTR3C-204ENST00000478393 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
ACTR3C-204ENST00000478393 HRCP23327 699 aa16.23■□□□□ 0.19
ACTR3C-204ENST00000478393 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
ACTR3C-204ENST00000478393 GOLGA3Q08378 1498 aa16.21■□□□□ 0.18
ACTR3C-204ENST00000478393 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
ACTR3C-204ENST00000478393 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
ACTR3C-204ENST00000478393 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
ACTR3C-204ENST00000478393 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
ACTR3C-204ENST00000478393 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
ACTR3C-204ENST00000478393 PPARGC1BQ86YN6 1023 aaKnown RBP16.08■□□□□ 0.17
ACTR3C-204ENST00000478393 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
ACTR3C-204ENST00000478393 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
ACTR3C-204ENST00000478393 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
ACTR3C-204ENST00000478393 CLIP1P30622 1438 aa16.01■□□□□ 0.15
ACTR3C-204ENST00000478393 ABCC8Q09428 1581 aa16■□□□□ 0.15
ACTR3C-204ENST00000478393 MYT1Q01538 1121 aa16■□□□□ 0.15
ACTR3C-204ENST00000478393 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
ACTR3C-204ENST00000478393 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
ACTR3C-204ENST00000478393 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
ACTR3C-204ENST00000478393 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
ACTR3C-204ENST00000478393 DAXXQ9UER7 740 aaPredicted RBP15.93■□□□□ 0.14
ACTR3C-204ENST00000478393 NEFMP07197 916 aa15.93■□□□□ 0.14
ACTR3C-204ENST00000478393 ANP32CO43423 234 aa15.92■□□□□ 0.14
ACTR3C-204ENST00000478393 TSPY4P0CV99 314 aa15.9■□□□□ 0.14
ACTR3C-204ENST00000478393 TSPY10P0CW01 314 aa15.9■□□□□ 0.14
ACTR3C-204ENST00000478393 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
ACTR3C-204ENST00000478393 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
ACTR3C-204ENST00000478393 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
ACTR3C-204ENST00000478393 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
ACTR3C-204ENST00000478393 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
ACTR3C-204ENST00000478393 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
ACTR3C-204ENST00000478393 CECR2Q9BXF3 1484 aa15.85■□□□□ 0.13
ACTR3C-204ENST00000478393 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
ACTR3C-204ENST00000478393 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
ACTR3C-204ENST00000478393 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.12
ACTR3C-204ENST00000478393 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
ACTR3C-204ENST00000478393 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
ACTR3C-204ENST00000478393 CARMIL2Q6F5E8 1435 aa15.82■□□□□ 0.12
ACTR3C-204ENST00000478393 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
ACTR3C-204ENST00000478393 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
ACTR3C-204ENST00000478393 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
ACTR3C-204ENST00000478393 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
ACTR3C-204ENST00000478393 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
ACTR3C-204ENST00000478393 CUX2O14529 1486 aa15.76■□□□□ 0.11
ACTR3C-204ENST00000478393 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
ACTR3C-204ENST00000478393 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
ACTR3C-204ENST00000478393 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
ACTR3C-204ENST00000478393 BCANQ96GW7 911 aa15.73■□□□□ 0.11
ACTR3C-204ENST00000478393 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
ACTR3C-204ENST00000478393 FMN1Q68DA7 1419 aa15.7■□□□□ 0.1
ACTR3C-204ENST00000478393 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
ACTR3C-204ENST00000478393 SOGA1O94964 1423 aa15.68■□□□□ 0.1
ACTR3C-204ENST00000478393 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
ACTR3C-204ENST00000478393 CDCA8Q53HL2 280 aa15.63■□□□□ 0.09
ACTR3C-204ENST00000478393 WIZO95785 1651 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms