RNA–Protein interactions for RNA: ENST00000475903.5

TSC1-205, Transcript of TSC complex subunit 1, humanhuman

TSL 4

Gene TSC1, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-205ENST00000475903 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.25
TSC1-205ENST00000475903 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
TSC1-205ENST00000475903 ABCC9O60706 1549 aa31.08■■■□□ 2.57
TSC1-205ENST00000475903 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
TSC1-205ENST00000475903 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
TSC1-205ENST00000475903 NACADO15069 1562 aa29.61■■■□□ 2.33
TSC1-205ENST00000475903 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
TSC1-205ENST00000475903 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
TSC1-205ENST00000475903 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
TSC1-205ENST00000475903 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
TSC1-205ENST00000475903 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
TSC1-205ENST00000475903 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
TSC1-205ENST00000475903 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
TSC1-205ENST00000475903 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
TSC1-205ENST00000475903 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
TSC1-205ENST00000475903 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
TSC1-205ENST00000475903 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
TSC1-205ENST00000475903 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
TSC1-205ENST00000475903 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
TSC1-205ENST00000475903 SMARCA4P51532 1647 aa27.39■■□□□ 1.98
TSC1-205ENST00000475903 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
TSC1-205ENST00000475903 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
TSC1-205ENST00000475903 SMARCA2P51531 1590 aa27.26■■□□□ 1.96
TSC1-205ENST00000475903 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
TSC1-205ENST00000475903 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
TSC1-205ENST00000475903 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
TSC1-205ENST00000475903 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
TSC1-205ENST00000475903 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
TSC1-205ENST00000475903 WIZO95785 1651 aa26.9■■□□□ 1.9
TSC1-205ENST00000475903 NESP48681 1621 aa26.83■■□□□ 1.89
TSC1-205ENST00000475903 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
TSC1-205ENST00000475903 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
TSC1-205ENST00000475903 LAMC3Q9Y6N6 1575 aa26.62■■□□□ 1.85
TSC1-205ENST00000475903 TOP2AP11388 1531 aaKnown RBP26.57■■□□□ 1.84
TSC1-205ENST00000475903 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
TSC1-205ENST00000475903 CUX2O14529 1486 aa26.5■■□□□ 1.83
TSC1-205ENST00000475903 CFTRP13569 1480 aa26.38■■□□□ 1.81
TSC1-205ENST00000475903 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
TSC1-205ENST00000475903 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
TSC1-205ENST00000475903 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
TSC1-205ENST00000475903 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
TSC1-205ENST00000475903 MRC2Q9UBG0 1479 aa26.24■■□□□ 1.79
TSC1-205ENST00000475903 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
TSC1-205ENST00000475903 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
TSC1-205ENST00000475903 WDR62O43379 1518 aa26.11■■□□□ 1.77
TSC1-205ENST00000475903 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
TSC1-205ENST00000475903 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
TSC1-205ENST00000475903 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
TSC1-205ENST00000475903 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
TSC1-205ENST00000475903 ABCC8Q09428 1581 aa25.79■■□□□ 1.72
TSC1-205ENST00000475903 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
TSC1-205ENST00000475903 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
TSC1-205ENST00000475903 ZNF608Q9ULD9 1512 aaPredicted RBP25.67■■□□□ 1.7
TSC1-205ENST00000475903 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
TSC1-205ENST00000475903 SOGA1O94964 1423 aa25.56■■□□□ 1.68
TSC1-205ENST00000475903 RAD54L2Q9Y4B4 1467 aa25.56■■□□□ 1.68
TSC1-205ENST00000475903 OSCARQ8IYS5 282 aa25.56■■□□□ 1.68
TSC1-205ENST00000475903 CUX1P39880 1505 aa25.56■■□□□ 1.68
TSC1-205ENST00000475903 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.682e-6■■□□□ 11.4
TSC1-205ENST00000475903 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
TSC1-205ENST00000475903 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
TSC1-205ENST00000475903 TDRD9Q8NDG6 1382 aaKnown RBP25.49■■□□□ 1.67
TSC1-205ENST00000475903 EIF4G3O43432 1585 aaKnown RBP25.42■■□□□ 1.66
TSC1-205ENST00000475903 FBLN2P98095 1184 aa25.36■■□□□ 1.65
TSC1-205ENST00000475903 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
TSC1-205ENST00000475903 SYNJ1O43426 1573 aa25.23■■□□□ 1.63
TSC1-205ENST00000475903 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
TSC1-205ENST00000475903 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
TSC1-205ENST00000475903 GRIN2BQ13224 1484 aa25.22■■□□□ 1.63
TSC1-205ENST00000475903 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
TSC1-205ENST00000475903 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
TSC1-205ENST00000475903 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
TSC1-205ENST00000475903 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
TSC1-205ENST00000475903 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
TSC1-205ENST00000475903 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
TSC1-205ENST00000475903 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
TSC1-205ENST00000475903 CHD1O14646 1710 aa25.12■■□□□ 1.61
TSC1-205ENST00000475903 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
TSC1-205ENST00000475903 SYNJ2O15056 1496 aa25.07■■□□□ 1.6
TSC1-205ENST00000475903 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
TSC1-205ENST00000475903 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
TSC1-205ENST00000475903 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
TSC1-205ENST00000475903 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
TSC1-205ENST00000475903 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
TSC1-205ENST00000475903 CYB5RLQ6IPT4 315 aa24.96■■□□□ 1.59
TSC1-205ENST00000475903 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
TSC1-205ENST00000475903 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
TSC1-205ENST00000475903 CLASP1Q7Z460 1538 aa24.88■■□□□ 1.57
TSC1-205ENST00000475903 GRIN2AQ12879 1464 aa24.88■■□□□ 1.57
TSC1-205ENST00000475903 ADAMTS12P58397 1594 aa24.85■■□□□ 1.57
TSC1-205ENST00000475903 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
TSC1-205ENST00000475903 IGF1RP08069 1367 aa24.84■■□□□ 1.57
TSC1-205ENST00000475903 NUP160Q12769 1436 aa24.78■■□□□ 1.56
TSC1-205ENST00000475903 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
TSC1-205ENST00000475903 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
TSC1-205ENST00000475903 JPH4Q96JJ6 628 aa24.68■■□□□ 1.54
TSC1-205ENST00000475903 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
TSC1-205ENST00000475903 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
TSC1-205ENST00000475903 ERCC6L2Q5T890 1561 aa24.59■■□□□ 1.53
TSC1-205ENST00000475903 PRG4Q92954 1404 aaPredicted RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 298 ms