RNA–Protein interactions for RNA: ENST00000475877.5

BRD7-204, Transcript of bromodomain containing 7, humanhuman

TSL 3

Gene BRD7, Length 671 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7-204ENST00000475877 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
BRD7-204ENST00000475877 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
BRD7-204ENST00000475877 SENP3Q9H4L4 574 aaPredicted RBP25.17■■□□□ 1.62
BRD7-204ENST00000475877 PHF23Q9BUL5 403 aaPredicted RBP24.81■■□□□ 1.56
BRD7-204ENST00000475877 FOXD1Q16676 465 aa23.48■■□□□ 1.35
BRD7-204ENST00000475877 MSH5O43196 834 aa22.07■■□□□ 1.12
BRD7-204ENST00000475877 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
BRD7-204ENST00000475877 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
BRD7-204ENST00000475877 POTEDQ86YR6 584 aa21.94■■□□□ 1.1
BRD7-204ENST00000475877 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
BRD7-204ENST00000475877 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
BRD7-204ENST00000475877 ADRA2BP18089 450 aa21.73■■□□□ 1.07
BRD7-204ENST00000475877 ABCC9O60706 1549 aa20.08■□□□□ 0.81
BRD7-204ENST00000475877 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
BRD7-204ENST00000475877 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
BRD7-204ENST00000475877 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
BRD7-204ENST00000475877 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
BRD7-204ENST00000475877 PPP4R3CPQ6ZMV5 832 aa19.33■□□□□ 0.68
BRD7-204ENST00000475877 DCAF8L1A6NGE4 600 aa19.25■□□□□ 0.67
BRD7-204ENST00000475877 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
BRD7-204ENST00000475877 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
BRD7-204ENST00000475877 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
BRD7-204ENST00000475877 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
BRD7-204ENST00000475877 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
BRD7-204ENST00000475877 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
BRD7-204ENST00000475877 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
BRD7-204ENST00000475877 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
BRD7-204ENST00000475877 NACADO15069 1562 aa18.79■□□□□ 0.6
BRD7-204ENST00000475877 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
BRD7-204ENST00000475877 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
BRD7-204ENST00000475877 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
BRD7-204ENST00000475877 MYO15BQ96JP2 1530 aa18.41■□□□□ 0.54
BRD7-204ENST00000475877 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
BRD7-204ENST00000475877 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
BRD7-204ENST00000475877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.523e-8■■□□□ 14.1
BRD7-204ENST00000475877 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
BRD7-204ENST00000475877 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
BRD7-204ENST00000475877 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
BRD7-204ENST00000475877 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
BRD7-204ENST00000475877 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
BRD7-204ENST00000475877 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
BRD7-204ENST00000475877 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
BRD7-204ENST00000475877 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
BRD7-204ENST00000475877 SCRIBQ14160 1630 aa17.91■□□□□ 0.46
BRD7-204ENST00000475877 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
BRD7-204ENST00000475877 KCNA4P22459 653 aa17.71■□□□□ 0.43
BRD7-204ENST00000475877 CAPN15O75808 1086 aa17.67■□□□□ 0.42
BRD7-204ENST00000475877 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
BRD7-204ENST00000475877 DSG3P32926 999 aa17.53■□□□□ 0.4
BRD7-204ENST00000475877 CUX2O14529 1486 aa17.5■□□□□ 0.39
BRD7-204ENST00000475877 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
BRD7-204ENST00000475877 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
BRD7-204ENST00000475877 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
BRD7-204ENST00000475877 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
BRD7-204ENST00000475877 APLP2Q06481 763 aa17.29■□□□□ 0.36
BRD7-204ENST00000475877 ABCB7O75027 752 aa17.25■□□□□ 0.35
BRD7-204ENST00000475877 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
BRD7-204ENST00000475877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
BRD7-204ENST00000475877 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
BRD7-204ENST00000475877 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
BRD7-204ENST00000475877 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
BRD7-204ENST00000475877 POTEHQ6S545 545 aa17.16■□□□□ 0.34
BRD7-204ENST00000475877 HMGXB3Q12766 1538 aa17.14■□□□□ 0.33
BRD7-204ENST00000475877 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
BRD7-204ENST00000475877 NESP48681 1621 aa17.1■□□□□ 0.33
BRD7-204ENST00000475877 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
BRD7-204ENST00000475877 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
BRD7-204ENST00000475877 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
BRD7-204ENST00000475877 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
BRD7-204ENST00000475877 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
BRD7-204ENST00000475877 LAMC3Q9Y6N6 1575 aa17■□□□□ 0.31
BRD7-204ENST00000475877 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
BRD7-204ENST00000475877 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
BRD7-204ENST00000475877 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
BRD7-204ENST00000475877 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
BRD7-204ENST00000475877 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
BRD7-204ENST00000475877 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
BRD7-204ENST00000475877 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
BRD7-204ENST00000475877 POLA2Q14181 598 aa16.78■□□□□ 0.28
BRD7-204ENST00000475877 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
BRD7-204ENST00000475877 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
BRD7-204ENST00000475877 WDR62O43379 1518 aa16.7■□□□□ 0.26
BRD7-204ENST00000475877 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
BRD7-204ENST00000475877 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
BRD7-204ENST00000475877 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
BRD7-204ENST00000475877 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
BRD7-204ENST00000475877 WIZO95785 1651 aa16.54■□□□□ 0.24
BRD7-204ENST00000475877 CFTRP13569 1480 aa16.53■□□□□ 0.24
BRD7-204ENST00000475877 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
BRD7-204ENST00000475877 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
BRD7-204ENST00000475877 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
BRD7-204ENST00000475877 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
BRD7-204ENST00000475877 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
BRD7-204ENST00000475877 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
BRD7-204ENST00000475877 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
BRD7-204ENST00000475877 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
BRD7-204ENST00000475877 IFT140Q96RY7 1462 aa16.36■□□□□ 0.21
BRD7-204ENST00000475877 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
BRD7-204ENST00000475877 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
BRD7-204ENST00000475877 ARHGEF11O15085 1522 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms