RNA–Protein interactions for RNA: ENST00000475777.2

ARPC3-205, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 2

Gene ARPC3, Length 837 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-205ENST00000475777 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
ARPC3-205ENST00000475777 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
ARPC3-205ENST00000475777 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
ARPC3-205ENST00000475777 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
ARPC3-205ENST00000475777 FOXD1Q16676 465 aa21.45■■□□□ 1.02
ARPC3-205ENST00000475777 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
ARPC3-205ENST00000475777 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
ARPC3-205ENST00000475777 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
ARPC3-205ENST00000475777 MSH5O43196 834 aa20.06■□□□□ 0.8
ARPC3-205ENST00000475777 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
ARPC3-205ENST00000475777 ADRA2BP18089 450 aa19.99■□□□□ 0.79
ARPC3-205ENST00000475777 POTEDQ86YR6 584 aa19.67■□□□□ 0.74
ARPC3-205ENST00000475777 ABCC9O60706 1549 aa18.65■□□□□ 0.58
ARPC3-205ENST00000475777 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
ARPC3-205ENST00000475777 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
ARPC3-205ENST00000475777 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
ARPC3-205ENST00000475777 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
ARPC3-205ENST00000475777 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
ARPC3-205ENST00000475777 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
ARPC3-205ENST00000475777 NACADO15069 1562 aa17.62■□□□□ 0.41
ARPC3-205ENST00000475777 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
ARPC3-205ENST00000475777 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
ARPC3-205ENST00000475777 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
ARPC3-205ENST00000475777 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
ARPC3-205ENST00000475777 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
ARPC3-205ENST00000475777 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
ARPC3-205ENST00000475777 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
ARPC3-205ENST00000475777 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
ARPC3-205ENST00000475777 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
ARPC3-205ENST00000475777 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
ARPC3-205ENST00000475777 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
ARPC3-205ENST00000475777 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
ARPC3-205ENST00000475777 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
ARPC3-205ENST00000475777 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
ARPC3-205ENST00000475777 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
ARPC3-205ENST00000475777 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
ARPC3-205ENST00000475777 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
ARPC3-205ENST00000475777 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
ARPC3-205ENST00000475777 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
ARPC3-205ENST00000475777 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
ARPC3-205ENST00000475777 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
ARPC3-205ENST00000475777 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
ARPC3-205ENST00000475777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.283e-11■■□□□ 11.4
ARPC3-205ENST00000475777 KCNA4P22459 653 aa16.62■□□□□ 0.25
ARPC3-205ENST00000475777 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
ARPC3-205ENST00000475777 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
ARPC3-205ENST00000475777 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
ARPC3-205ENST00000475777 CAPN15O75808 1086 aa16.19■□□□□ 0.18
ARPC3-205ENST00000475777 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
ARPC3-205ENST00000475777 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
ARPC3-205ENST00000475777 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
ARPC3-205ENST00000475777 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
ARPC3-205ENST00000475777 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
ARPC3-205ENST00000475777 HMGXB3Q12766 1538 aa16.14■□□□□ 0.17
ARPC3-205ENST00000475777 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
ARPC3-205ENST00000475777 CUX2O14529 1486 aa16.07■□□□□ 0.16
ARPC3-205ENST00000475777 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
ARPC3-205ENST00000475777 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
ARPC3-205ENST00000475777 NESP48681 1621 aa16.05■□□□□ 0.16
ARPC3-205ENST00000475777 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
ARPC3-205ENST00000475777 DSG3P32926 999 aa16.03■□□□□ 0.16
ARPC3-205ENST00000475777 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
ARPC3-205ENST00000475777 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
ARPC3-205ENST00000475777 APLP2Q06481 763 aa15.9■□□□□ 0.14
ARPC3-205ENST00000475777 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
ARPC3-205ENST00000475777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
ARPC3-205ENST00000475777 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
ARPC3-205ENST00000475777 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
ARPC3-205ENST00000475777 ABCB7O75027 752 aa15.82■□□□□ 0.12
ARPC3-205ENST00000475777 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
ARPC3-205ENST00000475777 WIZO95785 1651 aa15.8■□□□□ 0.12
ARPC3-205ENST00000475777 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
ARPC3-205ENST00000475777 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
ARPC3-205ENST00000475777 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
ARPC3-205ENST00000475777 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
ARPC3-205ENST00000475777 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
ARPC3-205ENST00000475777 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
ARPC3-205ENST00000475777 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
ARPC3-205ENST00000475777 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
ARPC3-205ENST00000475777 WDR62O43379 1518 aa15.64■□□□□ 0.09
ARPC3-205ENST00000475777 CFTRP13569 1480 aa15.61■□□□□ 0.09
ARPC3-205ENST00000475777 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
ARPC3-205ENST00000475777 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
ARPC3-205ENST00000475777 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
ARPC3-205ENST00000475777 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
ARPC3-205ENST00000475777 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
ARPC3-205ENST00000475777 POLA2Q14181 598 aa15.45■□□□□ 0.06
ARPC3-205ENST00000475777 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
ARPC3-205ENST00000475777 POTEHQ6S545 545 aa15.42■□□□□ 0.06
ARPC3-205ENST00000475777 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
ARPC3-205ENST00000475777 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
ARPC3-205ENST00000475777 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
ARPC3-205ENST00000475777 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
ARPC3-205ENST00000475777 TOPBP1Q92547 1522 aa15.3■□□□□ 0.04
ARPC3-205ENST00000475777 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
ARPC3-205ENST00000475777 IFT140Q96RY7 1462 aa15.29■□□□□ 0.04
ARPC3-205ENST00000475777 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
ARPC3-205ENST00000475777 ZBTB22O15209 634 aa15.27■□□□□ 0.04
ARPC3-205ENST00000475777 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
ARPC3-205ENST00000475777 DNMBPQ6XZF7 1577 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms