RNA–Protein interactions for RNA: ENST00000475723.5

TTC19-206, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 2

Gene TTC19, Length 2,591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-206ENST00000475723 NISCHQ9Y2I1 1504 aa41.91■■■■■ 4.3
TTC19-206ENST00000475723 SHROOM4Q9ULL8 1493 aa36.08■■■■□ 3.37
TTC19-206ENST00000475723 SUPT5HO00267 1087 aaKnown RBP35.75■■■■□ 3.31
TTC19-206ENST00000475723 HRCP23327 699 aa35.61■■■■□ 3.29
TTC19-206ENST00000475723 CCDC180Q9P1Z9 1646 aa35.59■■■■□ 3.29
TTC19-206ENST00000475723 MYO15BQ96JP2 1530 aa35.36■■■■□ 3.25
TTC19-206ENST00000475723 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
TTC19-206ENST00000475723 DCAF8L2P0C7V8 631 aa35.29■■■■□ 3.24
TTC19-206ENST00000475723 CHIC1Q5VXU3 224 aa35.17■■■■□ 3.22
TTC19-206ENST00000475723 PCGF6Q9BYE7 350 aa35■■■■□ 3.19
TTC19-206ENST00000475723 PPARGC1BQ86YN6 1023 aaKnown RBP34.81■■■■□ 3.16
TTC19-206ENST00000475723 DCAF1Q9Y4B6 1507 aa34.56■■■■□ 3.12
TTC19-206ENST00000475723 LOC105371045A0A1W2PR82 267 aa34.22■■■■□ 3.07
TTC19-206ENST00000475723 TRIM26Q12899 539 aaPredicted RBP34.06■■■■□ 3.04
TTC19-206ENST00000475723 ABCC9O60706 1549 aa33.71■■■□□ 2.99
TTC19-206ENST00000475723 PELP1Q8IZL8 1130 aaKnown RBP33.68■■■□□ 2.98
TTC19-206ENST00000475723 ZEB1P37275 1124 aaPredicted RBP33.66■■■□□ 2.98
TTC19-206ENST00000475723 SCRIBQ14160 1630 aa33.64■■■□□ 2.98
TTC19-206ENST00000475723 SCAF1Q9H7N4 1312 aaKnown RBP33.42■■■□□ 2.94
TTC19-206ENST00000475723 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
TTC19-206ENST00000475723 RSF1Q96T23 1441 aaPredicted RBP33.13■■■□□ 2.89
TTC19-206ENST00000475723 NACADO15069 1562 aa33.06■■■□□ 2.88
TTC19-206ENST00000475723 FAM9AQ8IZU1 332 aaPredicted RBP33.03■■■□□ 2.88
TTC19-206ENST00000475723 RB1CC1Q8TDY2 1594 aa32.98■■■□□ 2.87
TTC19-206ENST00000475723 CECR2Q9BXF3 1484 aa32.91■■■□□ 2.86
TTC19-206ENST00000475723 EHMT2Q96KQ7 1210 aa32.79■■■□□ 2.84
TTC19-206ENST00000475723 ACIN1Q9UKV3 1341 aaKnown RBP32.74■■■□□ 2.83
TTC19-206ENST00000475723 MROH2BQ7Z745 1585 aa32.68■■■□□ 2.82
TTC19-206ENST00000475723 NEUROD1Q13562 356 aa32.65■■■□□ 2.82
TTC19-206ENST00000475723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.6■■■□□ 2.81
TTC19-206ENST00000475723 CCER1Q8TC90 406 aaPredicted RBP32.52■■■□□ 2.8
TTC19-206ENST00000475723 WIZO95785 1651 aa32.49■■■□□ 2.79
TTC19-206ENST00000475723 GTF3C3Q9Y5Q9 886 aa32.41■■■□□ 2.78
TTC19-206ENST00000475723 DIEXFQ68CQ4 756 aaKnown RBP32.39■■■□□ 2.78
TTC19-206ENST00000475723 CENPBP07199 599 aaPredicted RBP32.35■■■□□ 2.77
TTC19-206ENST00000475723 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
TTC19-206ENST00000475723 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
TTC19-206ENST00000475723 MYT1Q01538 1121 aa32.22■■■□□ 2.75
TTC19-206ENST00000475723 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
TTC19-206ENST00000475723 EIF4G1Q04637 1599 aaKnown RBP32.12■■■□□ 2.73
TTC19-206ENST00000475723 WRNQ14191 1432 aaPredicted RBP eCLIP32.08■■■□□ 2.73
TTC19-206ENST00000475723 SMARCA4P51532 1647 aa31.99■■■□□ 2.71
TTC19-206ENST00000475723 TTBK1Q5TCY1 1321 aaPredicted RBP31.97■■■□□ 2.71
TTC19-206ENST00000475723 CEP162Q5TB80 1403 aa31.91■■■□□ 2.7
TTC19-206ENST00000475723 ZNF316A6NFI3 1004 aaPredicted RBP31.9■■■□□ 2.7
TTC19-206ENST00000475723 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.69
TTC19-206ENST00000475723 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
TTC19-206ENST00000475723 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.68
TTC19-206ENST00000475723 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
TTC19-206ENST00000475723 TNIKQ9UKE5 1360 aa31.75■■■□□ 2.67
TTC19-206ENST00000475723 YTHDC1Q96MU7 727 aaKnown RBP31.73■■■□□ 2.67
TTC19-206ENST00000475723 SMARCA2P51531 1590 aa31.7■■■□□ 2.67
TTC19-206ENST00000475723 SOGA1O94964 1423 aa31.66■■■□□ 2.66
TTC19-206ENST00000475723 MIER1Q8N108 512 aa31.62■■■□□ 2.65
TTC19-206ENST00000475723 EEA1Q15075 1411 aa31.52■■■□□ 2.64
TTC19-206ENST00000475723 CSRNP3Q8WYN3 585 aa31.5■■■□□ 2.63
TTC19-206ENST00000475723 RUSC2Q8N2Y8 1516 aa31.49■■■□□ 2.63
TTC19-206ENST00000475723 UBTFP17480 764 aaKnown RBP31.48■■■□□ 2.63
TTC19-206ENST00000475723 GOLGA3Q08378 1498 aa31.42■■■□□ 2.62
TTC19-206ENST00000475723 HNRNPUL2Q1KMD3 747 aaKnown RBP31.36■■■□□ 2.61
TTC19-206ENST00000475723 ATAD2BQ9ULI0 1458 aa31.3■■■□□ 2.6
TTC19-206ENST00000475723 PEG3Q9GZU2 1588 aa31.25■■■□□ 2.59
TTC19-206ENST00000475723 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.59
TTC19-206ENST00000475723 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
TTC19-206ENST00000475723 KIF21BO75037 1637 aa31.11■■■□□ 2.57
TTC19-206ENST00000475723 CLIP1P30622 1438 aa31.11■■■□□ 2.57
TTC19-206ENST00000475723 VPS8Q8N3P4 1428 aa31.08■■■□□ 2.57
TTC19-206ENST00000475723 CLSPNQ9HAW4 1339 aa31.02■■■□□ 2.56
TTC19-206ENST00000475723 SUPT16HQ9Y5B9 1047 aaKnown RBP31■■■□□ 2.55
TTC19-206ENST00000475723 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
TTC19-206ENST00000475723 APLP2Q06481 763 aa30.92■■■□□ 2.54
TTC19-206ENST00000475723 DHX57Q6P158 1386 aaKnown RBP30.87■■■□□ 2.53
TTC19-206ENST00000475723 RAPGEF2Q9Y4G8 1499 aa30.84■■■□□ 2.53
TTC19-206ENST00000475723 RANGAP1P46060 587 aaPredicted RBP30.77■■■□□ 2.52
TTC19-206ENST00000475723 TSHZ2Q9NRE2 1034 aa30.76■■■□□ 2.51
TTC19-206ENST00000475723 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
TTC19-206ENST00000475723 ANP32EQ9BTT0 268 aa30.6■■■□□ 2.49
TTC19-206ENST00000475723 HMGXB3Q12766 1538 aa30.56■■■□□ 2.48
TTC19-206ENST00000475723 ARAP1Q96P48 1450 aa30.54■■■□□ 2.48
TTC19-206ENST00000475723 KANK4Q5T7N3 995 aaPredicted RBP30.52■■■□□ 2.48
TTC19-206ENST00000475723 TOP2BQ02880 1626 aa30.51■■■□□ 2.48
TTC19-206ENST00000475723 RRBP1Q9P2E9 1410 aaKnown RBP30.49■■■□□ 2.47
TTC19-206ENST00000475723 CUX2O14529 1486 aa30.47■■■□□ 2.47
TTC19-206ENST00000475723 KCNH8Q96L42 1107 aa30.45■■■□□ 2.46
TTC19-206ENST00000475723 ERICH3Q5RHP9 1530 aa30.44■■■□□ 2.46
TTC19-206ENST00000475723 CUX1P39880 1505 aa30.42■■■□□ 2.46
TTC19-206ENST00000475723 PRXQ9BXM0 1461 aa30.38■■■□□ 2.45
TTC19-206ENST00000475723 CFTRP13569 1480 aa30.37■■■□□ 2.45
TTC19-206ENST00000475723 BIVM-ERCC5R4GMW8 1640 aa30.35■■■□□ 2.45
TTC19-206ENST00000475723 CCNB3Q8WWL7 1395 aa30.31■■■□□ 2.44
TTC19-206ENST00000475723 BCANQ96GW7 911 aa30.3■■■□□ 2.44
TTC19-206ENST00000475723 MAPKBP1O60336 1514 aa30.25■■■□□ 2.43
TTC19-206ENST00000475723 FKBP8Q14318 412 aa30.23■■■□□ 2.43
TTC19-206ENST00000475723 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
TTC19-206ENST00000475723 BCL11AQ9H165 835 aa30.2■■■□□ 2.43
TTC19-206ENST00000475723 ITGAEP38570 1179 aa30.19■■■□□ 2.42
TTC19-206ENST00000475723 RAB3GAP2Q9H2M9 1393 aa30.19■■■□□ 2.42
TTC19-206ENST00000475723 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
TTC19-206ENST00000475723 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
TTC19-206ENST00000475723 ARHGAP35Q9NRY4 1499 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms