RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 SF3A3Q12874 501 aaKnown RBP eCLIP10.45□□□□□ -0.741e-25■■■■□ 21.6
BRD9-203ENST00000475706 SF3B4Q15427 424 aaKnown RBP eCLIP10.52□□□□□ -0.732e-20■■■■■ 29
BRD9-203ENST00000475706 TARDBPQ13148 414 aaKnown RBP eCLIP11.5□□□□□ -0.571e-14■■■■■ 72.7
BRD9-203ENST00000475706 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.75□□□□□ -0.216e-12■□□□□ 9.7
BRD9-203ENST00000475706 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.182e-11■■■■■ 77.4
BRD9-203ENST00000475706 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.692e-11■■□□□ 13.7
BRD9-203ENST00000475706 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.32e-10■■□□□ 12.7
BRD9-203ENST00000475706 ZNF622Q969S3 477 aaKnown RBP eCLIP15□□□□□ -0.012e-10■□□□□ 9.9
BRD9-203ENST00000475706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.66■□□□□ 0.422e-9■■□□□ 11.7
BRD9-203ENST00000475706 RBFOX2O43251 390 aaKnown RBP eCLIP8.98□□□□□ -0.974e-9■■■■□ 22.7
BRD9-203ENST00000475706 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.837e-9■■□□□ 11.4
BRD9-203ENST00000475706 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.38e-9■■■□□ 18.7
BRD9-203ENST00000475706 DKC1O60832 514 aaKnown RBP eCLIP13.02□□□□□ -0.339e-9■■■■■ 51.4
BRD9-203ENST00000475706 GRSF1Q12849 480 aaKnown RBP eCLIP12.17□□□□□ -0.461e-8■■■■□ 23.1
BRD9-203ENST00000475706 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.17□□□□□ -0.942e-8■■■■■ 32.5
BRD9-203ENST00000475706 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.375e-8■■□□□ 13.4
BRD9-203ENST00000475706 EWSR1Q01844 656 aaKnown RBP eCLIP8.46□□□□□ -1.065e-8■■■□□ 17.4
BRD9-203ENST00000475706 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.576e-8■■■■■ 32.8
BRD9-203ENST00000475706 EFTUD2Q15029 972 aaKnown RBP eCLIP11.08□□□□□ -0.649e-8■■■■□ 23.5
BRD9-203ENST00000475706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.9□□□□□ -0.821e-7■■■□□ 15.8
BRD9-203ENST00000475706 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.152e-7■■■■■ 46.1
BRD9-203ENST00000475706 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.45□□□□□ -0.422e-7■■■□□ 15.9
BRD9-203ENST00000475706 SRSF7Q16629 238 aaKnown RBP eCLIP9.15□□□□□ -0.943e-7■■■■□ 20.9
BRD9-203ENST00000475706 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.87□□□□□ -0.673e-7■■■■□ 23.2
BRD9-203ENST00000475706 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■■■□□ 15.7
BRD9-203ENST00000475706 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.55e-7■□□□□ 10.5
BRD9-203ENST00000475706 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.515e-7■■■■□ 21.6
BRD9-203ENST00000475706 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.847e-7■■■■■ 39
BRD9-203ENST00000475706 FUSP35637 526 aaKnown RBP eCLIP7.78□□□□□ -1.169e-7■■■■□ 22.7
BRD9-203ENST00000475706 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■□□□□ 9.9
BRD9-203ENST00000475706 SMNDC1O75940 238 aaKnown RBP eCLIP10.41□□□□□ -0.741e-6■■■■□ 25
BRD9-203ENST00000475706 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.591e-6■□□□□ 9.2
BRD9-203ENST00000475706 PPIGQ13427 754 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■□□ 15.3
BRD9-203ENST00000475706 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■■■■□ 23.3
BRD9-203ENST00000475706 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■□□□□ 10.2
BRD9-203ENST00000475706 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.642e-6■■■■□ 20.5
BRD9-203ENST00000475706 TIAL1Q01085 375 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■■□ 22.9
BRD9-203ENST00000475706 ZRANB2O95218 330 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■■■■■ 31.5
BRD9-203ENST00000475706 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■■■ 137.9
BRD9-203ENST00000475706 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.014e-6■□□□□ 8.3
BRD9-203ENST00000475706 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.364e-6■■□□□ 11.4
BRD9-203ENST00000475706 PTBP1P26599 531 aaKnown RBP eCLIP8.88□□□□□ -0.995e-6■■■■□ 24.3
BRD9-203ENST00000475706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.42□□□□□ -0.426e-6■■■■■ 78.9
BRD9-203ENST00000475706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.257e-6■□□□□ 10.8
BRD9-203ENST00000475706 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.38e-6■■■□□ 15.4
Retrieved 45 of 45 RNA–protein pairs in 10.5 ms