RNA–Protein interactions for RNA: ENST00000474879.6

LMF2-202, Transcript of lipase maturation factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMF2, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF2-202ENST00000474879 NISCHQ9Y2I1 1504 aa34.41■■■■□ 3.1
LMF2-202ENST00000474879 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
LMF2-202ENST00000474879 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
LMF2-202ENST00000474879 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
LMF2-202ENST00000474879 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
LMF2-202ENST00000474879 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
LMF2-202ENST00000474879 ABCC9O60706 1549 aa28.08■■■□□ 2.09
LMF2-202ENST00000474879 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
LMF2-202ENST00000474879 MYO15BQ96JP2 1530 aa27.84■■■□□ 2.05
LMF2-202ENST00000474879 NACADO15069 1562 aa27.65■■■□□ 2.02
LMF2-202ENST00000474879 SCRIBQ14160 1630 aa27.57■■■□□ 2
LMF2-202ENST00000474879 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
LMF2-202ENST00000474879 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
LMF2-202ENST00000474879 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
LMF2-202ENST00000474879 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
LMF2-202ENST00000474879 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
LMF2-202ENST00000474879 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
LMF2-202ENST00000474879 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.86
LMF2-202ENST00000474879 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
LMF2-202ENST00000474879 LOC105371045A0A1W2PR82 267 aa26.5■■□□□ 1.83
LMF2-202ENST00000474879 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
LMF2-202ENST00000474879 WIZO95785 1651 aa26.48■■□□□ 1.83
LMF2-202ENST00000474879 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
LMF2-202ENST00000474879 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
LMF2-202ENST00000474879 HRCP23327 699 aa26.35■■□□□ 1.81
LMF2-202ENST00000474879 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
LMF2-202ENST00000474879 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
LMF2-202ENST00000474879 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
LMF2-202ENST00000474879 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
LMF2-202ENST00000474879 PEG3Q9GZU2 1588 aa25.97■■□□□ 1.75
LMF2-202ENST00000474879 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
LMF2-202ENST00000474879 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
LMF2-202ENST00000474879 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
LMF2-202ENST00000474879 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.73
LMF2-202ENST00000474879 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
LMF2-202ENST00000474879 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
LMF2-202ENST00000474879 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
LMF2-202ENST00000474879 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
LMF2-202ENST00000474879 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
LMF2-202ENST00000474879 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
LMF2-202ENST00000474879 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
LMF2-202ENST00000474879 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
LMF2-202ENST00000474879 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
LMF2-202ENST00000474879 SOGA1O94964 1423 aa25.14■■□□□ 1.62
LMF2-202ENST00000474879 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
LMF2-202ENST00000474879 CFTRP13569 1480 aa25.11■■□□□ 1.61
LMF2-202ENST00000474879 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
LMF2-202ENST00000474879 TTBK1Q5TCY1 1321 aaPredicted RBP25.03■■□□□ 1.6
LMF2-202ENST00000474879 CADPSQ9ULU8 1353 aa24.99■■□□□ 1.59
LMF2-202ENST00000474879 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
LMF2-202ENST00000474879 CSRNP3Q8WYN3 585 aa24.94■■□□□ 1.58
LMF2-202ENST00000474879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
LMF2-202ENST00000474879 EEA1Q15075 1411 aa24.92■■□□□ 1.58
LMF2-202ENST00000474879 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
LMF2-202ENST00000474879 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
LMF2-202ENST00000474879 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
LMF2-202ENST00000474879 CUX1P39880 1505 aa24.9■■□□□ 1.58
LMF2-202ENST00000474879 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
LMF2-202ENST00000474879 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
LMF2-202ENST00000474879 NESP48681 1621 aa24.78■■□□□ 1.56
LMF2-202ENST00000474879 CCER1Q8TC90 406 aaPredicted RBP24.78■■□□□ 1.56
LMF2-202ENST00000474879 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
LMF2-202ENST00000474879 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
LMF2-202ENST00000474879 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
LMF2-202ENST00000474879 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
LMF2-202ENST00000474879 KIF21BO75037 1637 aa24.63■■□□□ 1.53
LMF2-202ENST00000474879 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
LMF2-202ENST00000474879 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.52
LMF2-202ENST00000474879 FGD5Q6ZNL6 1462 aa24.56■■□□□ 1.52
LMF2-202ENST00000474879 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
LMF2-202ENST00000474879 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
LMF2-202ENST00000474879 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
LMF2-202ENST00000474879 PRXQ9BXM0 1461 aa24.49■■□□□ 1.51
LMF2-202ENST00000474879 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
LMF2-202ENST00000474879 CUX2O14529 1486 aa24.47■■□□□ 1.51
LMF2-202ENST00000474879 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
LMF2-202ENST00000474879 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
LMF2-202ENST00000474879 CLIP1P30622 1438 aa24.42■■□□□ 1.5
LMF2-202ENST00000474879 RAD54L2Q9Y4B4 1467 aa24.41■■□□□ 1.5
LMF2-202ENST00000474879 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
LMF2-202ENST00000474879 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
LMF2-202ENST00000474879 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.5
LMF2-202ENST00000474879 IGF1RP08069 1367 aa24.39■■□□□ 1.49
LMF2-202ENST00000474879 SCAF1Q9H7N4 1312 aaKnown RBP24.37■■□□□ 1.49
LMF2-202ENST00000474879 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
LMF2-202ENST00000474879 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
LMF2-202ENST00000474879 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
LMF2-202ENST00000474879 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
LMF2-202ENST00000474879 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
LMF2-202ENST00000474879 APLP2Q06481 763 aa24.19■■□□□ 1.46
LMF2-202ENST00000474879 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
LMF2-202ENST00000474879 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
LMF2-202ENST00000474879 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
LMF2-202ENST00000474879 NEUROD1Q13562 356 aa24.11■■□□□ 1.45
LMF2-202ENST00000474879 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
LMF2-202ENST00000474879 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
LMF2-202ENST00000474879 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
LMF2-202ENST00000474879 ACIN1Q9UKV3 1341 aaKnown RBP24.05■■□□□ 1.44
LMF2-202ENST00000474879 ZNF316A6NFI3 1004 aaPredicted RBP24.05■■□□□ 1.44
LMF2-202ENST00000474879 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms