RNA–Protein interactions for RNA: ENST00000474783.2

PAX6-216, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 4,392 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-216ENST00000474783 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
PAX6-216ENST00000474783 MYT1Q01538 1121 aa14.31□□□□□ -0.12
PAX6-216ENST00000474783 CCDC180Q9P1Z9 1646 aa14.1□□□□□ -0.15
PAX6-216ENST00000474783 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
PAX6-216ENST00000474783 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
PAX6-216ENST00000474783 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
PAX6-216ENST00000474783 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
PAX6-216ENST00000474783 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
PAX6-216ENST00000474783 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
PAX6-216ENST00000474783 MYO15BQ96JP2 1530 aa13.24□□□□□ -0.29
PAX6-216ENST00000474783 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
PAX6-216ENST00000474783 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
PAX6-216ENST00000474783 ABCC9O60706 1549 aa13.1□□□□□ -0.31
PAX6-216ENST00000474783 FAM9AQ8IZU1 332 aaPredicted RBP13.06□□□□□ -0.32
PAX6-216ENST00000474783 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
PAX6-216ENST00000474783 SUPT5HO00267 1087 aaKnown RBP12.82□□□□□ -0.36
PAX6-216ENST00000474783 NACADO15069 1562 aa12.81□□□□□ -0.36
PAX6-216ENST00000474783 CHIC1Q5VXU3 224 aa12.79□□□□□ -0.36
PAX6-216ENST00000474783 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
PAX6-216ENST00000474783 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
PAX6-216ENST00000474783 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
PAX6-216ENST00000474783 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
PAX6-216ENST00000474783 UNC13AQ9UPW8 1703 aa12.63□□□□□ -0.39
PAX6-216ENST00000474783 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
PAX6-216ENST00000474783 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.4
PAX6-216ENST00000474783 WIZO95785 1651 aa12.5□□□□□ -0.41
PAX6-216ENST00000474783 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
PAX6-216ENST00000474783 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
PAX6-216ENST00000474783 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
PAX6-216ENST00000474783 TOP2AP11388 1531 aaKnown RBP12.39□□□□□ -0.43
PAX6-216ENST00000474783 HRCP23327 699 aa12.39□□□□□ -0.43
PAX6-216ENST00000474783 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
PAX6-216ENST00000474783 BICRAQ9NZM4 1560 aa12.34□□□□□ -0.43
PAX6-216ENST00000474783 APLP2Q06481 763 aa12.33□□□□□ -0.44
PAX6-216ENST00000474783 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
PAX6-216ENST00000474783 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
PAX6-216ENST00000474783 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
PAX6-216ENST00000474783 CENPBP07199 599 aaPredicted RBP12.22□□□□□ -0.45
PAX6-216ENST00000474783 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
PAX6-216ENST00000474783 LOC105371045A0A1W2PR82 267 aa12.17□□□□□ -0.46
PAX6-216ENST00000474783 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
PAX6-216ENST00000474783 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
PAX6-216ENST00000474783 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
PAX6-216ENST00000474783 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
PAX6-216ENST00000474783 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
PAX6-216ENST00000474783 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
PAX6-216ENST00000474783 KIF21BO75037 1637 aa12.03□□□□□ -0.48
PAX6-216ENST00000474783 BIVM-ERCC5R4GMW8 1640 aa12.01□□□□□ -0.49
PAX6-216ENST00000474783 EEA1Q15075 1411 aa12.01□□□□□ -0.49
PAX6-216ENST00000474783 TRIM41Q8WV44 630 aa12□□□□□ -0.49
PAX6-216ENST00000474783 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
PAX6-216ENST00000474783 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
PAX6-216ENST00000474783 PRDM2Q13029 1718 aa11.99□□□□□ -0.49
PAX6-216ENST00000474783 GLIPR1L2Q4G1C9 344 aa11.96□□□□□ -0.49
PAX6-216ENST00000474783 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
PAX6-216ENST00000474783 HMGXB3Q12766 1538 aa11.92□□□□□ -0.5
PAX6-216ENST00000474783 TOP2BQ02880 1626 aa11.92□□□□□ -0.5
PAX6-216ENST00000474783 MYT1LQ9UL68 1186 aa11.9□□□□□ -0.5
PAX6-216ENST00000474783 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
PAX6-216ENST00000474783 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
PAX6-216ENST00000474783 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
PAX6-216ENST00000474783 SOGA1O94964 1423 aa11.87□□□□□ -0.51
PAX6-216ENST00000474783 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
PAX6-216ENST00000474783 BAZ1BQ9UIG0 1483 aaKnown RBP11.86□□□□□ -0.51
PAX6-216ENST00000474783 ATP1B4Q9UN42 357 aaPredicted RBP11.85□□□□□ -0.51
PAX6-216ENST00000474783 CEP162Q5TB80 1403 aa11.85□□□□□ -0.51
PAX6-216ENST00000474783 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
PAX6-216ENST00000474783 GOLGA3Q08378 1498 aa11.82□□□□□ -0.52
PAX6-216ENST00000474783 ERICH3Q5RHP9 1530 aa11.8□□□□□ -0.52
PAX6-216ENST00000474783 CEP164Q9UPV0 1460 aa11.78□□□□□ -0.52
PAX6-216ENST00000474783 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
PAX6-216ENST00000474783 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
PAX6-216ENST00000474783 NEFLP07196 543 aa11.74□□□□□ -0.53
PAX6-216ENST00000474783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
PAX6-216ENST00000474783 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
PAX6-216ENST00000474783 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
PAX6-216ENST00000474783 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
PAX6-216ENST00000474783 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
PAX6-216ENST00000474783 CUX1P39880 1505 aa11.7□□□□□ -0.54
PAX6-216ENST00000474783 CFTRP13569 1480 aa11.67□□□□□ -0.54
PAX6-216ENST00000474783 VPS8Q8N3P4 1428 aa11.65□□□□□ -0.54
PAX6-216ENST00000474783 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.55
PAX6-216ENST00000474783 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.55
PAX6-216ENST00000474783 ARAP1Q96P48 1450 aa11.62□□□□□ -0.55
PAX6-216ENST00000474783 CLIP1P30622 1438 aa11.61□□□□□ -0.55
PAX6-216ENST00000474783 CUX2O14529 1486 aa11.6□□□□□ -0.55
PAX6-216ENST00000474783 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
PAX6-216ENST00000474783 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
PAX6-216ENST00000474783 MAP3K1Q13233 1512 aa11.56□□□□□ -0.56
PAX6-216ENST00000474783 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
PAX6-216ENST00000474783 PODXL2Q9NZ53 605 aa11.55□□□□□ -0.56
PAX6-216ENST00000474783 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
PAX6-216ENST00000474783 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
PAX6-216ENST00000474783 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
PAX6-216ENST00000474783 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
PAX6-216ENST00000474783 RRBP1Q9P2E9 1410 aaKnown RBP11.49□□□□□ -0.57
PAX6-216ENST00000474783 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
PAX6-216ENST00000474783 CLSPNQ9HAW4 1339 aa11.48□□□□□ -0.57
PAX6-216ENST00000474783 ARHGAP35Q9NRY4 1499 aa11.46□□□□□ -0.57
PAX6-216ENST00000474783 FBLN2P98095 1184 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms