RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
SMG5-203ENST00000473643 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
SMG5-203ENST00000473643 ABCC9O60706 1549 aa19.18■□□□□ 0.66
SMG5-203ENST00000473643 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
SMG5-203ENST00000473643 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
SMG5-203ENST00000473643 NACADO15069 1562 aa18.31■□□□□ 0.52
SMG5-203ENST00000473643 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
SMG5-203ENST00000473643 ZCCHC6Q5VYS8 1495 aaKnown RBP18.09■□□□□ 0.49
SMG5-203ENST00000473643 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
SMG5-203ENST00000473643 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMG5-203ENST00000473643 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
SMG5-203ENST00000473643 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
SMG5-203ENST00000473643 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
SMG5-203ENST00000473643 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
SMG5-203ENST00000473643 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
SMG5-203ENST00000473643 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
SMG5-203ENST00000473643 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
SMG5-203ENST00000473643 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
SMG5-203ENST00000473643 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
SMG5-203ENST00000473643 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
SMG5-203ENST00000473643 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
SMG5-203ENST00000473643 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
SMG5-203ENST00000473643 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
SMG5-203ENST00000473643 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
SMG5-203ENST00000473643 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
SMG5-203ENST00000473643 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
SMG5-203ENST00000473643 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
SMG5-203ENST00000473643 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
SMG5-203ENST00000473643 NESP48681 1621 aa16.55■□□□□ 0.24
SMG5-203ENST00000473643 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
SMG5-203ENST00000473643 WIZO95785 1651 aa16.53■□□□□ 0.24
SMG5-203ENST00000473643 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
SMG5-203ENST00000473643 LAMC3Q9Y6N6 1575 aa16.45■□□□□ 0.22
SMG5-203ENST00000473643 CUX2O14529 1486 aa16.44■□□□□ 0.22
SMG5-203ENST00000473643 PDS5BQ9NTI5 1447 aa16.41■□□□□ 0.22
SMG5-203ENST00000473643 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
SMG5-203ENST00000473643 CFTRP13569 1480 aa16.3■□□□□ 0.2
SMG5-203ENST00000473643 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
SMG5-203ENST00000473643 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
SMG5-203ENST00000473643 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
SMG5-203ENST00000473643 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
SMG5-203ENST00000473643 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
SMG5-203ENST00000473643 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
SMG5-203ENST00000473643 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
SMG5-203ENST00000473643 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
SMG5-203ENST00000473643 WDR62O43379 1518 aa16.15■□□□□ 0.18
SMG5-203ENST00000473643 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
SMG5-203ENST00000473643 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
SMG5-203ENST00000473643 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
SMG5-203ENST00000473643 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
SMG5-203ENST00000473643 IFT140Q96RY7 1462 aa15.89■□□□□ 0.13
SMG5-203ENST00000473643 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
SMG5-203ENST00000473643 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
SMG5-203ENST00000473643 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
SMG5-203ENST00000473643 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
SMG5-203ENST00000473643 SOGA1O94964 1423 aa15.76■□□□□ 0.11
SMG5-203ENST00000473643 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
SMG5-203ENST00000473643 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMG5-203ENST00000473643 CUX1P39880 1505 aa15.73■□□□□ 0.11
SMG5-203ENST00000473643 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
SMG5-203ENST00000473643 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.1
SMG5-203ENST00000473643 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
SMG5-203ENST00000473643 EIF4G3O43432 1585 aaKnown RBP15.67■□□□□ 0.1
SMG5-203ENST00000473643 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
SMG5-203ENST00000473643 WDR97A6NE52 1622 aa15.59■□□□□ 0.09
SMG5-203ENST00000473643 FBLN2P98095 1184 aa15.59■□□□□ 0.09
SMG5-203ENST00000473643 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
SMG5-203ENST00000473643 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SMG5-203ENST00000473643 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
SMG5-203ENST00000473643 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
SMG5-203ENST00000473643 CHMP7Q8WUX9 453 aaPredicted RBP15.54■□□□□ 0.08
SMG5-203ENST00000473643 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
SMG5-203ENST00000473643 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
SMG5-203ENST00000473643 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.08
SMG5-203ENST00000473643 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
SMG5-203ENST00000473643 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
SMG5-203ENST00000473643 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
SMG5-203ENST00000473643 CHD1O14646 1710 aa15.47■□□□□ 0.07
SMG5-203ENST00000473643 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.07
SMG5-203ENST00000473643 ARHGEF11O15085 1522 aa15.46■□□□□ 0.07
SMG5-203ENST00000473643 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
SMG5-203ENST00000473643 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
SMG5-203ENST00000473643 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
SMG5-203ENST00000473643 CHIC1Q5VXU3 224 aa15.43■□□□□ 0.06
SMG5-203ENST00000473643 CYB5RLQ6IPT4 315 aa15.41■□□□□ 0.06
SMG5-203ENST00000473643 CLASP1Q7Z460 1538 aa15.39■□□□□ 0.05
SMG5-203ENST00000473643 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
SMG5-203ENST00000473643 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
SMG5-203ENST00000473643 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
SMG5-203ENST00000473643 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
SMG5-203ENST00000473643 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
SMG5-203ENST00000473643 IGF1RP08069 1367 aa15.32■□□□□ 0.04
SMG5-203ENST00000473643 NUP160Q12769 1436 aa15.32■□□□□ 0.04
SMG5-203ENST00000473643 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
SMG5-203ENST00000473643 KIF27Q86VH2 1401 aa15.29■□□□□ 0.04
SMG5-203ENST00000473643 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
SMG5-203ENST00000473643 JPH4Q96JJ6 628 aa15.22■□□□□ 0.03
SMG5-203ENST00000473643 CARMIL1Q5VZK9 1371 aa15.18■□□□□ 0.02
SMG5-203ENST00000473643 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
SMG5-203ENST00000473643 SHROOM2Q13796 1616 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms