RNA–Protein interactions for RNA: ENST00000473208.5

RYK-203, Transcript of receptor-like tyrosine kinase, humanhuman

TSL 1 (best)

Gene RYK, Length 5,270 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-203ENST00000473208 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
RYK-203ENST00000473208 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
RYK-203ENST00000473208 CCDC180Q9P1Z9 1646 aa11.56□□□□□ -0.56
RYK-203ENST00000473208 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
RYK-203ENST00000473208 SUPT5HO00267 1087 aaKnown RBP11.31□□□□□ -0.6
RYK-203ENST00000473208 ABCC9O60706 1549 aa11.31□□□□□ -0.6
RYK-203ENST00000473208 ZCCHC6Q5VYS8 1495 aaKnown RBP11.16□□□□□ -0.62
RYK-203ENST00000473208 RB1CC1Q8TDY2 1594 aa11.01□□□□□ -0.65
RYK-203ENST00000473208 NACADO15069 1562 aa11□□□□□ -0.65
RYK-203ENST00000473208 DCAF1Q9Y4B6 1507 aa10.97□□□□□ -0.65
RYK-203ENST00000473208 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
RYK-203ENST00000473208 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
RYK-203ENST00000473208 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
RYK-203ENST00000473208 TRIM41Q8WV44 630 aa10.71□□□□□ -0.7
RYK-203ENST00000473208 FAM9AQ8IZU1 332 aaPredicted RBP10.68□□□□□ -0.7
RYK-203ENST00000473208 APLP2Q06481 763 aa10.55□□□□□ -0.72
RYK-203ENST00000473208 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
RYK-203ENST00000473208 BAZ1AQ9NRL2 1556 aaPredicted RBP10.51□□□□□ -0.73
RYK-203ENST00000473208 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.74
RYK-203ENST00000473208 MYT1Q01538 1121 aa10.45□□□□□ -0.74
RYK-203ENST00000473208 RSF1Q96T23 1441 aaPredicted RBP10.43□□□□□ -0.74
RYK-203ENST00000473208 UBTFP17480 764 aaKnown RBP10.42□□□□□ -0.74
RYK-203ENST00000473208 CHIC1Q5VXU3 224 aa10.42□□□□□ -0.74
RYK-203ENST00000473208 BAZ1BQ9UIG0 1483 aaKnown RBP10.4□□□□□ -0.74
RYK-203ENST00000473208 SMARCA2P51531 1590 aa10.37□□□□□ -0.75
RYK-203ENST00000473208 CECR2Q9BXF3 1484 aa10.31□□□□□ -0.76
RYK-203ENST00000473208 MROH2BQ7Z745 1585 aa10.25□□□□□ -0.77
RYK-203ENST00000473208 RANGAP1P46060 587 aaPredicted RBP10.25□□□□□ -0.77
RYK-203ENST00000473208 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
RYK-203ENST00000473208 TOP2AP11388 1531 aaKnown RBP10.22□□□□□ -0.77
RYK-203ENST00000473208 ATP1B4Q9UN42 357 aaPredicted RBP10.21□□□□□ -0.77
RYK-203ENST00000473208 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
RYK-203ENST00000473208 ZEB1P37275 1124 aaPredicted RBP10.16□□□□□ -0.78
RYK-203ENST00000473208 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
RYK-203ENST00000473208 EEA1Q15075 1411 aa10.14□□□□□ -0.79
RYK-203ENST00000473208 WIZO95785 1651 aa10.13□□□□□ -0.79
RYK-203ENST00000473208 PCGF6Q9BYE7 350 aa10.13□□□□□ -0.79
RYK-203ENST00000473208 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
RYK-203ENST00000473208 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
RYK-203ENST00000473208 EIF4G1Q04637 1599 aaKnown RBP10.11□□□□□ -0.79
RYK-203ENST00000473208 CENPBP07199 599 aaPredicted RBP10.1□□□□□ -0.79
RYK-203ENST00000473208 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
RYK-203ENST00000473208 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
RYK-203ENST00000473208 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
RYK-203ENST00000473208 LOC105371045A0A1W2PR82 267 aa10.07□□□□□ -0.8
RYK-203ENST00000473208 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
RYK-203ENST00000473208 BICRAQ9NZM4 1560 aa10.05□□□□□ -0.8
RYK-203ENST00000473208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
RYK-203ENST00000473208 HRCP23327 699 aa10.05□□□□□ -0.8
RYK-203ENST00000473208 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
RYK-203ENST00000473208 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
RYK-203ENST00000473208 FBLN2P98095 1184 aa10.04□□□□□ -0.8
RYK-203ENST00000473208 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
RYK-203ENST00000473208 KIF27Q86VH2 1401 aa10.02□□□□□ -0.8
RYK-203ENST00000473208 TRIM26Q12899 539 aaPredicted RBP10□□□□□ -0.81
RYK-203ENST00000473208 UNC13AQ9UPW8 1703 aa10□□□□□ -0.81
RYK-203ENST00000473208 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
RYK-203ENST00000473208 CC2D2AQ9P2K1 1620 aa9.96□□□□□ -0.82
RYK-203ENST00000473208 GOLGA3Q08378 1498 aa9.96□□□□□ -0.82
RYK-203ENST00000473208 CEP164Q9UPV0 1460 aa9.95□□□□□ -0.82
RYK-203ENST00000473208 CHMP7Q8WUX9 453 aaPredicted RBP9.93□□□□□ -0.82
RYK-203ENST00000473208 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
RYK-203ENST00000473208 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
RYK-203ENST00000473208 PEG3Q9GZU2 1588 aa9.91□□□□□ -0.82
RYK-203ENST00000473208 FANCD2Q9BXW9 1451 aa9.9□□□□□ -0.82
RYK-203ENST00000473208 CUX2O14529 1486 aa9.88□□□□□ -0.83
RYK-203ENST00000473208 SOGA1O94964 1423 aa9.87□□□□□ -0.83
RYK-203ENST00000473208 MYT1LQ9UL68 1186 aa9.86□□□□□ -0.83
RYK-203ENST00000473208 PPARGC1BQ86YN6 1023 aaKnown RBP9.85□□□□□ -0.83
RYK-203ENST00000473208 TNIKQ9UKE5 1360 aa9.85□□□□□ -0.83
RYK-203ENST00000473208 CFTRP13569 1480 aa9.84□□□□□ -0.83
RYK-203ENST00000473208 CLIP1P30622 1438 aa9.84□□□□□ -0.83
RYK-203ENST00000473208 CARMIL1Q5VZK9 1371 aa9.82□□□□□ -0.84
RYK-203ENST00000473208 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
RYK-203ENST00000473208 ERICH6Q7L0X2 663 aa9.82□□□□□ -0.84
RYK-203ENST00000473208 P3H3Q8IVL6 736 aa9.82□□□□□ -0.84
RYK-203ENST00000473208 FAM50AQ14320 339 aaKnown RBP9.79□□□□□ -0.84
RYK-203ENST00000473208 ITGAEP38570 1179 aa9.79□□□□□ -0.84
RYK-203ENST00000473208 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
RYK-203ENST00000473208 CEP162Q5TB80 1403 aa9.78□□□□□ -0.84
RYK-203ENST00000473208 MRC2Q9UBG0 1479 aa9.75□□□□□ -0.85
RYK-203ENST00000473208 FHAD1B1AJZ9 1412 aa9.74□□□□□ -0.85
RYK-203ENST00000473208 RAPGEF2Q9Y4G8 1499 aa9.73□□□□□ -0.85
RYK-203ENST00000473208 FGD5Q6ZNL6 1462 aa9.73□□□□□ -0.85
RYK-203ENST00000473208 CARMIL2Q6F5E8 1435 aa9.72□□□□□ -0.85
RYK-203ENST00000473208 TDRD9Q8NDG6 1382 aaKnown RBP9.71□□□□□ -0.85
RYK-203ENST00000473208 MTUS2Q5JR59 1369 aa9.71□□□□□ -0.85
RYK-203ENST00000473208 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
RYK-203ENST00000473208 DNMBPQ6XZF7 1577 aa9.69□□□□□ -0.86
RYK-203ENST00000473208 TOP2BQ02880 1626 aa9.69□□□□□ -0.86
RYK-203ENST00000473208 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
RYK-203ENST00000473208 GAPVD1Q14C86 1478 aa9.68□□□□□ -0.86
RYK-203ENST00000473208 PLEKHD1A6NEE1 506 aa9.66□□□□□ -0.86
RYK-203ENST00000473208 NESP48681 1621 aa9.66□□□□□ -0.86
RYK-203ENST00000473208 ARID3CA6NKF2 412 aa9.66□□□□□ -0.86
RYK-203ENST00000473208 TRIM52Q96A61 297 aa9.65□□□□□ -0.86
RYK-203ENST00000473208 TOPBP1Q92547 1522 aa9.65□□□□□ -0.86
RYK-203ENST00000473208 FMN1Q68DA7 1419 aa9.65□□□□□ -0.86
RYK-203ENST00000473208 YTHDC1Q96MU7 727 aaKnown RBP9.64□□□□□ -0.87
RYK-203ENST00000473208 GRIN2BQ13224 1484 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms