RNA–Protein interactions for RNA: ENST00000472478.6

BRD8-219, Transcript of bromodomain containing 8, humanhuman

TSL 3

Gene BRD8, Length 745 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-219ENST00000472478 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
BRD8-219ENST00000472478 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
BRD8-219ENST00000472478 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
BRD8-219ENST00000472478 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
BRD8-219ENST00000472478 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
BRD8-219ENST00000472478 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
BRD8-219ENST00000472478 FOXD1Q16676 465 aa22.44■■□□□ 1.18
BRD8-219ENST00000472478 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
BRD8-219ENST00000472478 ABCC9O60706 1549 aa21.71■■□□□ 1.07
BRD8-219ENST00000472478 ADRA2BP18089 450 aa21.51■■□□□ 1.03
BRD8-219ENST00000472478 KCNA4P22459 653 aa21.42■■□□□ 1.02
BRD8-219ENST00000472478 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
BRD8-219ENST00000472478 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
BRD8-219ENST00000472478 PIAS4Q8N2W9 510 aaPredicted RBP21.08■□□□□ 0.97
BRD8-219ENST00000472478 MSH5O43196 834 aa20.95■□□□□ 0.94
BRD8-219ENST00000472478 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
BRD8-219ENST00000472478 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
BRD8-219ENST00000472478 NACADO15069 1562 aa20.69■□□□□ 0.9
BRD8-219ENST00000472478 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
BRD8-219ENST00000472478 SLC4A1APQ9BWU0 796 aaKnown RBP20.66■□□□□ 0.9
BRD8-219ENST00000472478 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
BRD8-219ENST00000472478 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
BRD8-219ENST00000472478 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
BRD8-219ENST00000472478 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.843e-6■■■■□ 23.3
BRD8-219ENST00000472478 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
BRD8-219ENST00000472478 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
BRD8-219ENST00000472478 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
BRD8-219ENST00000472478 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
BRD8-219ENST00000472478 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
BRD8-219ENST00000472478 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
BRD8-219ENST00000472478 POTEDQ86YR6 584 aa20■□□□□ 0.79
BRD8-219ENST00000472478 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
BRD8-219ENST00000472478 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
BRD8-219ENST00000472478 CNKSR2Q8WXI2 1034 aa19.74■□□□□ 0.75
BRD8-219ENST00000472478 ZBTB22O15209 634 aa19.72■□□□□ 0.75
BRD8-219ENST00000472478 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
BRD8-219ENST00000472478 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
BRD8-219ENST00000472478 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.73
BRD8-219ENST00000472478 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
BRD8-219ENST00000472478 FOXD4L1Q9NU39 408 aa19.45■□□□□ 0.7
BRD8-219ENST00000472478 SLC24A1O60721 1099 aa19.35■□□□□ 0.69
BRD8-219ENST00000472478 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
BRD8-219ENST00000472478 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
BRD8-219ENST00000472478 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
BRD8-219ENST00000472478 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
BRD8-219ENST00000472478 RTN4Q9NQC3 1192 aaKnown RBP19.1■□□□□ 0.65
BRD8-219ENST00000472478 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
BRD8-219ENST00000472478 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
BRD8-219ENST00000472478 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
BRD8-219ENST00000472478 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
BRD8-219ENST00000472478 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
BRD8-219ENST00000472478 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
BRD8-219ENST00000472478 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
BRD8-219ENST00000472478 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
BRD8-219ENST00000472478 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
BRD8-219ENST00000472478 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
BRD8-219ENST00000472478 ATXN8OSP0DMR3 200 aa18.74■□□□□ 0.59
BRD8-219ENST00000472478 CUX2O14529 1486 aa18.69■□□□□ 0.58
BRD8-219ENST00000472478 HOXD11P31277 338 aaPredicted RBP18.66■□□□□ 0.58
BRD8-219ENST00000472478 NESP48681 1621 aa18.65■□□□□ 0.58
BRD8-219ENST00000472478 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
BRD8-219ENST00000472478 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
BRD8-219ENST00000472478 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
BRD8-219ENST00000472478 FKBP8Q14318 412 aa18.58■□□□□ 0.56
BRD8-219ENST00000472478 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
BRD8-219ENST00000472478 WIZO95785 1651 aa18.57■□□□□ 0.56
BRD8-219ENST00000472478 MYCNP04198 464 aaPredicted RBP18.56■□□□□ 0.56
BRD8-219ENST00000472478 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
BRD8-219ENST00000472478 DNAJC5Q9H3Z4 198 aa18.54■□□□□ 0.56
BRD8-219ENST00000472478 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
BRD8-219ENST00000472478 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
BRD8-219ENST00000472478 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
BRD8-219ENST00000472478 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
BRD8-219ENST00000472478 CFTRP13569 1480 aa18.34■□□□□ 0.53
BRD8-219ENST00000472478 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
BRD8-219ENST00000472478 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
BRD8-219ENST00000472478 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
BRD8-219ENST00000472478 WDR62O43379 1518 aa18.23■□□□□ 0.51
BRD8-219ENST00000472478 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
BRD8-219ENST00000472478 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
BRD8-219ENST00000472478 ABCC8Q09428 1581 aa18.05■□□□□ 0.48
BRD8-219ENST00000472478 PRDM2Q13029 1718 aa18.05■□□□□ 0.48
BRD8-219ENST00000472478 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
BRD8-219ENST00000472478 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
BRD8-219ENST00000472478 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
BRD8-219ENST00000472478 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
BRD8-219ENST00000472478 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
BRD8-219ENST00000472478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
BRD8-219ENST00000472478 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
BRD8-219ENST00000472478 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
BRD8-219ENST00000472478 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
BRD8-219ENST00000472478 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
BRD8-219ENST00000472478 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
BRD8-219ENST00000472478 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
BRD8-219ENST00000472478 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
BRD8-219ENST00000472478 SOGA1O94964 1423 aa17.8■□□□□ 0.44
BRD8-219ENST00000472478 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
BRD8-219ENST00000472478 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.431e-8■■■■□ 25.4
BRD8-219ENST00000472478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.432e-7■■■□□ 15.9
BRD8-219ENST00000472478 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms