RNA–Protein interactions for RNA: ENST00000471143.5

TSC2-212, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-212ENST00000471143 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
TSC2-212ENST00000471143 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.78
TSC2-212ENST00000471143 ABCC9O60706 1549 aa26.02■■□□□ 1.76
TSC2-212ENST00000471143 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
TSC2-212ENST00000471143 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
TSC2-212ENST00000471143 NACADO15069 1562 aa24.76■■□□□ 1.55
TSC2-212ENST00000471143 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
TSC2-212ENST00000471143 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
TSC2-212ENST00000471143 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
TSC2-212ENST00000471143 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
TSC2-212ENST00000471143 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
TSC2-212ENST00000471143 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
TSC2-212ENST00000471143 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
TSC2-212ENST00000471143 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
TSC2-212ENST00000471143 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
TSC2-212ENST00000471143 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
TSC2-212ENST00000471143 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
TSC2-212ENST00000471143 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
TSC2-212ENST00000471143 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
TSC2-212ENST00000471143 ATAD2BQ9ULI0 1458 aa22.9■■□□□ 1.26
TSC2-212ENST00000471143 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
TSC2-212ENST00000471143 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
TSC2-212ENST00000471143 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
TSC2-212ENST00000471143 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
TSC2-212ENST00000471143 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
TSC2-212ENST00000471143 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
TSC2-212ENST00000471143 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
TSC2-212ENST00000471143 NESP48681 1621 aa22.44■■□□□ 1.18
TSC2-212ENST00000471143 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
TSC2-212ENST00000471143 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
TSC2-212ENST00000471143 WIZO95785 1651 aa22.38■■□□□ 1.17
TSC2-212ENST00000471143 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
TSC2-212ENST00000471143 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
TSC2-212ENST00000471143 CUX2O14529 1486 aa22.27■■□□□ 1.16
TSC2-212ENST00000471143 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
TSC2-212ENST00000471143 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
TSC2-212ENST00000471143 CFTRP13569 1480 aa22.06■■□□□ 1.12
TSC2-212ENST00000471143 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
TSC2-212ENST00000471143 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
TSC2-212ENST00000471143 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
TSC2-212ENST00000471143 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
TSC2-212ENST00000471143 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
TSC2-212ENST00000471143 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
TSC2-212ENST00000471143 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
TSC2-212ENST00000471143 WDR62O43379 1518 aa21.85■■□□□ 1.09
TSC2-212ENST00000471143 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
TSC2-212ENST00000471143 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
TSC2-212ENST00000471143 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
TSC2-212ENST00000471143 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
TSC2-212ENST00000471143 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
TSC2-212ENST00000471143 IFT140Q96RY7 1462 aa21.52■■□□□ 1.03
TSC2-212ENST00000471143 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
TSC2-212ENST00000471143 ZNF608Q9ULD9 1512 aaPredicted RBP21.46■■□□□ 1.03
TSC2-212ENST00000471143 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
TSC2-212ENST00000471143 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
TSC2-212ENST00000471143 SOGA1O94964 1423 aa21.36■■□□□ 1.01
TSC2-212ENST00000471143 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.012e-6■■■■□ 23.1
TSC2-212ENST00000471143 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
TSC2-212ENST00000471143 CUX1P39880 1505 aa21.31■■□□□ 1
TSC2-212ENST00000471143 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
TSC2-212ENST00000471143 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
TSC2-212ENST00000471143 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
TSC2-212ENST00000471143 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
TSC2-212ENST00000471143 FBLN2P98095 1184 aa21.18■□□□□ 0.98
TSC2-212ENST00000471143 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
TSC2-212ENST00000471143 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
TSC2-212ENST00000471143 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
TSC2-212ENST00000471143 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
TSC2-212ENST00000471143 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
TSC2-212ENST00000471143 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
TSC2-212ENST00000471143 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
TSC2-212ENST00000471143 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
TSC2-212ENST00000471143 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
TSC2-212ENST00000471143 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
TSC2-212ENST00000471143 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
TSC2-212ENST00000471143 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
TSC2-212ENST00000471143 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
TSC2-212ENST00000471143 ARHGEF11O15085 1522 aa20.95■□□□□ 0.94
TSC2-212ENST00000471143 CHD1O14646 1710 aa20.95■□□□□ 0.94
TSC2-212ENST00000471143 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
TSC2-212ENST00000471143 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
TSC2-212ENST00000471143 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
TSC2-212ENST00000471143 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
TSC2-212ENST00000471143 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
TSC2-212ENST00000471143 CLASP1Q7Z460 1538 aa20.83■□□□□ 0.93
TSC2-212ENST00000471143 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
TSC2-212ENST00000471143 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
TSC2-212ENST00000471143 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
TSC2-212ENST00000471143 ARAP1Q96P48 1450 aa20.79■□□□□ 0.92
TSC2-212ENST00000471143 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
TSC2-212ENST00000471143 IGF1RP08069 1367 aa20.74■□□□□ 0.91
TSC2-212ENST00000471143 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
TSC2-212ENST00000471143 NUP160Q12769 1436 aa20.74■□□□□ 0.91
TSC2-212ENST00000471143 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
TSC2-212ENST00000471143 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
TSC2-212ENST00000471143 JPH4Q96JJ6 628 aa20.64■□□□□ 0.89
TSC2-212ENST00000471143 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
TSC2-212ENST00000471143 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
TSC2-212ENST00000471143 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
TSC2-212ENST00000471143 PRG4Q92954 1404 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms