RNA–Protein interactions for RNA: ENST00000470873.1

MCFD2-213, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 4

Gene MCFD2, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-213ENST00000470873 NISCHQ9Y2I1 1504 aa42.77■■■■■ 4.44
MCFD2-213ENST00000470873 CCDC180Q9P1Z9 1646 aa37.81■■■■□ 3.64
MCFD2-213ENST00000470873 ABCC9O60706 1549 aa36.81■■■■□ 3.48
MCFD2-213ENST00000470873 DCAF8L2P0C7V8 631 aa35.75■■■■□ 3.31
MCFD2-213ENST00000470873 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
MCFD2-213ENST00000470873 NACADO15069 1562 aa35.58■■■■□ 3.29
MCFD2-213ENST00000470873 RB1CC1Q8TDY2 1594 aa35.54■■■■□ 3.28
MCFD2-213ENST00000470873 MYO15BQ96JP2 1530 aa35.48■■■■□ 3.27
MCFD2-213ENST00000470873 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
MCFD2-213ENST00000470873 SCRIBQ14160 1630 aa34.53■■■■□ 3.12
MCFD2-213ENST00000470873 PABPN1Q86U42 306 aaKnown RBP eCLIP34.51■■■■□ 3.12
MCFD2-213ENST00000470873 UNC13AQ9UPW8 1703 aa34.5■■■■□ 3.11
MCFD2-213ENST00000470873 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
MCFD2-213ENST00000470873 SHROOM4Q9ULL8 1493 aa34.16■■■■□ 3.06
MCFD2-213ENST00000470873 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
MCFD2-213ENST00000470873 EIF4G1Q04637 1599 aaKnown RBP33.48■■■□□ 2.95
MCFD2-213ENST00000470873 CECR2Q9BXF3 1484 aa33.26■■■□□ 2.92
MCFD2-213ENST00000470873 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
MCFD2-213ENST00000470873 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
MCFD2-213ENST00000470873 SMARCA4P51532 1647 aa33.07■■■□□ 2.88
MCFD2-213ENST00000470873 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
MCFD2-213ENST00000470873 ATAD2BQ9ULI0 1458 aa32.89■■■□□ 2.86
MCFD2-213ENST00000470873 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
MCFD2-213ENST00000470873 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
MCFD2-213ENST00000470873 PEG3Q9GZU2 1588 aa32.76■■■□□ 2.84
MCFD2-213ENST00000470873 RSF1Q96T23 1441 aaPredicted RBP32.72■■■□□ 2.83
MCFD2-213ENST00000470873 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
MCFD2-213ENST00000470873 BAZ1BQ9UIG0 1483 aaKnown RBP32.65■■■□□ 2.82
MCFD2-213ENST00000470873 WIZO95785 1651 aa32.53■■■□□ 2.8
MCFD2-213ENST00000470873 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
MCFD2-213ENST00000470873 SUPT5HO00267 1087 aaKnown RBP32.18■■■□□ 2.74
MCFD2-213ENST00000470873 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
MCFD2-213ENST00000470873 CCDC88BA6NC98 1476 aa31.92■■■□□ 2.7
MCFD2-213ENST00000470873 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
MCFD2-213ENST00000470873 NESP48681 1621 aa31.89■■■□□ 2.7
MCFD2-213ENST00000470873 CFTRP13569 1480 aa31.78■■■□□ 2.68
MCFD2-213ENST00000470873 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
MCFD2-213ENST00000470873 ERCC6Q03468 1493 aa31.77■■■□□ 2.68
MCFD2-213ENST00000470873 FANCD2Q9BXW9 1451 aa31.53■■■□□ 2.64
MCFD2-213ENST00000470873 CEP164Q9UPV0 1460 aa31.47■■■□□ 2.63
MCFD2-213ENST00000470873 KIF21AQ7Z4S6 1674 aa31.43■■■□□ 2.62
MCFD2-213ENST00000470873 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
MCFD2-213ENST00000470873 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
MCFD2-213ENST00000470873 CUX2O14529 1486 aa31.3■■■□□ 2.6
MCFD2-213ENST00000470873 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
MCFD2-213ENST00000470873 WDR62O43379 1518 aa31.2■■■□□ 2.59
MCFD2-213ENST00000470873 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
MCFD2-213ENST00000470873 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
MCFD2-213ENST00000470873 TOPBP1Q92547 1522 aa31.03■■■□□ 2.56
MCFD2-213ENST00000470873 DNMBPQ6XZF7 1577 aa31.01■■■□□ 2.56
MCFD2-213ENST00000470873 CUX1P39880 1505 aa30.88■■■□□ 2.53
MCFD2-213ENST00000470873 WRNQ14191 1432 aaPredicted RBP eCLIP30.87■■■□□ 2.53
MCFD2-213ENST00000470873 IFT140Q96RY7 1462 aa30.82■■■□□ 2.52
MCFD2-213ENST00000470873 POLA1P09884 1462 aaPredicted RBP30.8■■■□□ 2.52
MCFD2-213ENST00000470873 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.51
MCFD2-213ENST00000470873 SOGA1O94964 1423 aa30.74■■■□□ 2.51
MCFD2-213ENST00000470873 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
MCFD2-213ENST00000470873 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
MCFD2-213ENST00000470873 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
MCFD2-213ENST00000470873 BIVM-ERCC5R4GMW8 1640 aa30.63■■■□□ 2.49
MCFD2-213ENST00000470873 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
MCFD2-213ENST00000470873 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
MCFD2-213ENST00000470873 TDRD9Q8NDG6 1382 aaKnown RBP30.52■■■□□ 2.48
MCFD2-213ENST00000470873 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.472e-6■■■■□ 23.2
MCFD2-213ENST00000470873 ABCA10Q8WWZ4 1543 aa30.49■■■□□ 2.47
MCFD2-213ENST00000470873 WDR97A6NE52 1622 aa30.45■■■□□ 2.47
MCFD2-213ENST00000470873 EIF4G3O43432 1585 aaKnown RBP30.43■■■□□ 2.46
MCFD2-213ENST00000470873 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
MCFD2-213ENST00000470873 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
MCFD2-213ENST00000470873 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
MCFD2-213ENST00000470873 ABCA5Q8WWZ7 1642 aa30.26■■■□□ 2.44
MCFD2-213ENST00000470873 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
MCFD2-213ENST00000470873 MAGI1Q96QZ7 1491 aaPredicted RBP30.21■■■□□ 2.43
MCFD2-213ENST00000470873 SNAPC4Q5SXM2 1469 aa30.2■■■□□ 2.43
MCFD2-213ENST00000470873 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
MCFD2-213ENST00000470873 FBLN2P98095 1184 aa30.17■■■□□ 2.42
MCFD2-213ENST00000470873 OSCARQ8IYS5 282 aa30.16■■■□□ 2.42
MCFD2-213ENST00000470873 CHMP7Q8WUX9 453 aaPredicted RBP30.15■■■□□ 2.42
MCFD2-213ENST00000470873 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
MCFD2-213ENST00000470873 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
MCFD2-213ENST00000470873 SYNJ2O15056 1496 aa30.09■■■□□ 2.41
MCFD2-213ENST00000470873 DNAJC5Q9H3Z4 198 aa30.07■■■□□ 2.4
MCFD2-213ENST00000470873 IGF1RP08069 1367 aa30.06■■■□□ 2.4
MCFD2-213ENST00000470873 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
MCFD2-213ENST00000470873 ADAMTS12P58397 1594 aa29.97■■■□□ 2.39
MCFD2-213ENST00000470873 RUSC2Q8N2Y8 1516 aa29.93■■■□□ 2.38
MCFD2-213ENST00000470873 CHD1O14646 1710 aa29.93■■■□□ 2.38
MCFD2-213ENST00000470873 GRIN2AQ12879 1464 aa29.91■■■□□ 2.38
MCFD2-213ENST00000470873 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
MCFD2-213ENST00000470873 CUL7Q14999 1698 aa29.86■■■□□ 2.37
MCFD2-213ENST00000470873 EEA1Q15075 1411 aa29.86■■■□□ 2.37
MCFD2-213ENST00000470873 CSRNP3Q8WYN3 585 aa29.81■■■□□ 2.36
MCFD2-213ENST00000470873 NUP160Q12769 1436 aa29.77■■■□□ 2.36
MCFD2-213ENST00000470873 FAM9AQ8IZU1 332 aaPredicted RBP29.73■■■□□ 2.35
MCFD2-213ENST00000470873 RAPGEF2Q9Y4G8 1499 aa29.73■■■□□ 2.35
MCFD2-213ENST00000470873 CLASP1Q7Z460 1538 aa29.7■■■□□ 2.34
MCFD2-213ENST00000470873 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
MCFD2-213ENST00000470873 CEP170Q5SW79 1584 aa29.67■■■□□ 2.34
MCFD2-213ENST00000470873 KIAA0586Q9BVV6 1533 aa29.59■■■□□ 2.33
MCFD2-213ENST00000470873 JPH4Q96JJ6 628 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms