RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 CUL7Q14999 1698 aa23.48■■□□□ 1.35
ABCA4-204ENST00000470771 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
ABCA4-204ENST00000470771 KIAA0586Q9BVV6 1533 aa23.45■■□□□ 1.34
ABCA4-204ENST00000470771 NPM1P06748 294 aaKnown RBP eCLIP23.43■■□□□ 1.34
ABCA4-204ENST00000470771 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
ABCA4-204ENST00000470771 CARMIL2Q6F5E8 1435 aa23.29■■□□□ 1.32
ABCA4-204ENST00000470771 PTPRGP23470 1445 aa23.26■■□□□ 1.31
ABCA4-204ENST00000470771 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
ABCA4-204ENST00000470771 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
ABCA4-204ENST00000470771 TNIKQ9UKE5 1360 aa23.21■■□□□ 1.31
ABCA4-204ENST00000470771 FAM69CQ0P6D2 419 aa23.2■■□□□ 1.3
ABCA4-204ENST00000470771 IQGAP2Q13576 1575 aa23.19■■□□□ 1.3
ABCA4-204ENST00000470771 ADCY10Q96PN6 1610 aa23.14■■□□□ 1.29
ABCA4-204ENST00000470771 MAPKBP1O60336 1514 aa23.13■■□□□ 1.29
ABCA4-204ENST00000470771 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
ABCA4-204ENST00000470771 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
ABCA4-204ENST00000470771 DISP1Q96F81 1524 aa23.06■■□□□ 1.28
ABCA4-204ENST00000470771 UGGT2Q9NYU1 1516 aa23.06■■□□□ 1.28
ABCA4-204ENST00000470771 UACAQ9BZF9 1416 aa23.05■■□□□ 1.28
ABCA4-204ENST00000470771 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
ABCA4-204ENST00000470771 ABCC2Q92887 1545 aa23.03■■□□□ 1.28
ABCA4-204ENST00000470771 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
ABCA4-204ENST00000470771 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.28
ABCA4-204ENST00000470771 PRXQ9BXM0 1461 aa23.01■■□□□ 1.27
ABCA4-204ENST00000470771 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
ABCA4-204ENST00000470771 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
ABCA4-204ENST00000470771 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
ABCA4-204ENST00000470771 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
ABCA4-204ENST00000470771 ASXL2Q76L83 1435 aa22.95■■□□□ 1.26
ABCA4-204ENST00000470771 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
ABCA4-204ENST00000470771 EEA1Q15075 1411 aa22.91■■□□□ 1.26
ABCA4-204ENST00000470771 CTTNBP2Q8WZ74 1663 aa22.91■■□□□ 1.26
ABCA4-204ENST00000470771 KDM5BQ9UGL1 1544 aa22.89■■□□□ 1.26
ABCA4-204ENST00000470771 GLI2P10070 1586 aa22.82■■□□□ 1.24
ABCA4-204ENST00000470771 TSPOAP1O95153 1857 aa22.81■■□□□ 1.24
ABCA4-204ENST00000470771 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
ABCA4-204ENST00000470771 KDM6BO15054 1643 aa22.79■■□□□ 1.24
ABCA4-204ENST00000470771 EPRSP07814 1512 aaKnown RBP22.78■■□□□ 1.24
ABCA4-204ENST00000470771 ZCCHC11Q5TAX3 1644 aaKnown RBP22.78■■□□□ 1.24
ABCA4-204ENST00000470771 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
ABCA4-204ENST00000470771 KCNH8Q96L42 1107 aa22.75■■□□□ 1.23
ABCA4-204ENST00000470771 ABCA8O94911 1581 aa22.73■■□□□ 1.23
ABCA4-204ENST00000470771 TEX14Q8IWB6 1497 aa22.73■■□□□ 1.23
ABCA4-204ENST00000470771 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
ABCA4-204ENST00000470771 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
ABCA4-204ENST00000470771 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
ABCA4-204ENST00000470771 MAP3K4Q9Y6R4 1608 aa22.65■■□□□ 1.22
ABCA4-204ENST00000470771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
ABCA4-204ENST00000470771 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
ABCA4-204ENST00000470771 CD109Q6YHK3 1445 aa22.65■■□□□ 1.22
ABCA4-204ENST00000470771 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
ABCA4-204ENST00000470771 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
ABCA4-204ENST00000470771 PPRC1Q5VV67 1664 aaKnown RBP22.62■■□□□ 1.21
ABCA4-204ENST00000470771 ATP10BO94823 1461 aa22.61■■□□□ 1.21
ABCA4-204ENST00000470771 KIF21BO75037 1637 aa22.58■■□□□ 1.21
ABCA4-204ENST00000470771 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
ABCA4-204ENST00000470771 KDM4FA0A1W2PPD8 638 aa22.54■■□□□ 1.2
ABCA4-204ENST00000470771 CFAP43Q8NDM7 1665 aa22.54■■□□□ 1.2
ABCA4-204ENST00000470771 FHOD3Q2V2M9 1422 aa22.54■■□□□ 1.2
ABCA4-204ENST00000470771 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
ABCA4-204ENST00000470771 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
ABCA4-204ENST00000470771 PLEKHD1A6NEE1 506 aa22.53■■□□□ 1.2
ABCA4-204ENST00000470771 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
ABCA4-204ENST00000470771 EFCAB5A4FU69 1503 aa22.52■■□□□ 1.19
ABCA4-204ENST00000470771 PHLDB1Q86UU1 1377 aa22.49■■□□□ 1.19
ABCA4-204ENST00000470771 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
ABCA4-204ENST00000470771 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
ABCA4-204ENST00000470771 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
ABCA4-204ENST00000470771 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.18
ABCA4-204ENST00000470771 ARAP3Q8WWN8 1544 aa22.39■■□□□ 1.17
ABCA4-204ENST00000470771 CDK11AQ9UQ88 783 aaPredicted RBP22.38■■□□□ 1.17
ABCA4-204ENST00000470771 ADGRL1O94910 1474 aa22.36■■□□□ 1.17
ABCA4-204ENST00000470771 NEO1Q92859 1461 aa22.35■■□□□ 1.17
ABCA4-204ENST00000470771 RAPGEF3O95398 923 aa22.31■■□□□ 1.16
ABCA4-204ENST00000470771 ARHGAP35Q9NRY4 1499 aa22.3■■□□□ 1.16
ABCA4-204ENST00000470771 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
ABCA4-204ENST00000470771 FANCAO15360 1455 aa22.23■■□□□ 1.15
ABCA4-204ENST00000470771 HECW1Q76N89 1606 aa22.23■■□□□ 1.15
ABCA4-204ENST00000470771 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
ABCA4-204ENST00000470771 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
ABCA4-204ENST00000470771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.21■■□□□ 1.15
ABCA4-204ENST00000470771 ARID4BQ4LE39 1312 aaPredicted RBP22.2■■□□□ 1.14
ABCA4-204ENST00000470771 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
ABCA4-204ENST00000470771 CFAP74Q9C0B2 1584 aa22.19■■□□□ 1.14
ABCA4-204ENST00000470771 CLIP1P30622 1438 aa22.18■■□□□ 1.14
ABCA4-204ENST00000470771 PLCH2O75038 1416 aa22.16■■□□□ 1.14
ABCA4-204ENST00000470771 TTC37Q6PGP7 1564 aa22.14■■□□□ 1.13
ABCA4-204ENST00000470771 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
ABCA4-204ENST00000470771 CASKIN1Q8WXD9 1431 aa22.12■■□□□ 1.13
ABCA4-204ENST00000470771 SCAPERQ9BY12 1400 aa22.1■■□□□ 1.13
ABCA4-204ENST00000470771 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
ABCA4-204ENST00000470771 MAGI2Q86UL8 1455 aa22.08■■□□□ 1.12
ABCA4-204ENST00000470771 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.12
ABCA4-204ENST00000470771 KIF14Q15058 1648 aa22.07■■□□□ 1.12
ABCA4-204ENST00000470771 POGZQ7Z3K3 1410 aa22.05■■□□□ 1.12
ABCA4-204ENST00000470771 RICTORQ6R327 1708 aa22.04■■□□□ 1.12
ABCA4-204ENST00000470771 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
ABCA4-204ENST00000470771 MYO5CQ9NQX4 1742 aa22.02■■□□□ 1.12
ABCA4-204ENST00000470771 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
ABCA4-204ENST00000470771 ZMYM4Q5VZL5 1548 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms