RNA–Protein interactions for RNA: ENST00000470376.5

NSFL1C-205, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-205ENST00000470376 NISCHQ9Y2I1 1504 aa53.06■■■■■ 6.08
NSFL1C-205ENST00000470376 CCDC180Q9P1Z9 1646 aa47.29■■■■■ 5.16
NSFL1C-205ENST00000470376 ABCC9O60706 1549 aa46.7■■■■■ 5.07
NSFL1C-205ENST00000470376 RB1CC1Q8TDY2 1594 aa44.72■■■■■ 4.75
NSFL1C-205ENST00000470376 DCAF8L2P0C7V8 631 aa44.64■■■■■ 4.74
NSFL1C-205ENST00000470376 NACADO15069 1562 aa44.56■■■■■ 4.72
NSFL1C-205ENST00000470376 MYO15BQ96JP2 1530 aa44.14■■■■■ 4.66
NSFL1C-205ENST00000470376 ZCCHC6Q5VYS8 1495 aaKnown RBP44.09■■■■■ 4.65
NSFL1C-205ENST00000470376 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
NSFL1C-205ENST00000470376 UNC13AQ9UPW8 1703 aa43.72■■■■■ 4.59
NSFL1C-205ENST00000470376 PABPN1Q86U42 306 aaKnown RBP eCLIP43.63■■■■■ 4.57
NSFL1C-205ENST00000470376 BICRAQ9NZM4 1560 aa43.37■■■■■ 4.53
NSFL1C-205ENST00000470376 DNAJC5BQ9UF47 199 aa43.21■■■■■ 4.51
NSFL1C-205ENST00000470376 SCRIBQ14160 1630 aa43.19■■■■■ 4.5
NSFL1C-205ENST00000470376 SHROOM4Q9ULL8 1493 aa42.81■■■■■ 4.44
NSFL1C-205ENST00000470376 EIF4G1Q04637 1599 aaKnown RBP42.26■■■■■ 4.36
NSFL1C-205ENST00000470376 CC2D2AQ9P2K1 1620 aa42.2■■■■■ 4.35
NSFL1C-205ENST00000470376 CECR2Q9BXF3 1484 aa41.98■■■■■ 4.31
NSFL1C-205ENST00000470376 SMARCA4P51532 1647 aa41.25■■■■■ 4.19
NSFL1C-205ENST00000470376 BAZ1AQ9NRL2 1556 aaPredicted RBP41.14■■■■■ 4.18
NSFL1C-205ENST00000470376 NCAPD3P42695 1498 aa41.13■■■■■ 4.17
NSFL1C-205ENST00000470376 ATAD2BQ9ULI0 1458 aa41.12■■■■■ 4.17
NSFL1C-205ENST00000470376 SMARCA2P51531 1590 aa41.03■■■■■ 4.16
NSFL1C-205ENST00000470376 MROH2BQ7Z745 1585 aa40.91■■■■■ 4.14
NSFL1C-205ENST00000470376 HMGXB3Q12766 1538 aa40.87■■■■■ 4.13
NSFL1C-205ENST00000470376 PEG3Q9GZU2 1588 aa40.8■■■■■ 4.12
NSFL1C-205ENST00000470376 BAZ1BQ9UIG0 1483 aaKnown RBP40.77■■■■■ 4.12
NSFL1C-205ENST00000470376 WIZO95785 1651 aa40.47■■■■■ 4.07
NSFL1C-205ENST00000470376 NESP48681 1621 aa40.31■■■■■ 4.04
NSFL1C-205ENST00000470376 RSF1Q96T23 1441 aaPredicted RBP40.3■■■■■ 4.04
NSFL1C-205ENST00000470376 ERCC6Q03468 1493 aa40.28■■■■■ 4.04
NSFL1C-205ENST00000470376 LAMC3Q9Y6N6 1575 aa40.1■■■■■ 4.01
NSFL1C-205ENST00000470376 TOP2AP11388 1531 aaKnown RBP39.96■■■■□ 3.99
NSFL1C-205ENST00000470376 CADPSQ9ULU8 1353 aa39.95■■■■□ 3.99
NSFL1C-205ENST00000470376 CUX2O14529 1486 aa39.93■■■■□ 3.98
NSFL1C-205ENST00000470376 PDS5BQ9NTI5 1447 aa39.88■■■■□ 3.97
NSFL1C-205ENST00000470376 KIF21AQ7Z4S6 1674 aa39.8■■■■□ 3.96
NSFL1C-205ENST00000470376 THOC2Q8NI27 1593 aaKnown RBP39.72■■■■□ 3.95
NSFL1C-205ENST00000470376 CFTRP13569 1480 aa39.61■■■■□ 3.93
NSFL1C-205ENST00000470376 CCDC88BA6NC98 1476 aa39.55■■■■□ 3.92
NSFL1C-205ENST00000470376 FANCD2Q9BXW9 1451 aa39.49■■■■□ 3.91
NSFL1C-205ENST00000470376 MRC2Q9UBG0 1479 aa39.47■■■■□ 3.91
NSFL1C-205ENST00000470376 CEP164Q9UPV0 1460 aa39.46■■■■□ 3.91
NSFL1C-205ENST00000470376 WDR62O43379 1518 aa39.33■■■■□ 3.89
NSFL1C-205ENST00000470376 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
NSFL1C-205ENST00000470376 DNAJC5Q9H3Z4 198 aa39.18■■■■□ 3.86
NSFL1C-205ENST00000470376 SUPT5HO00267 1087 aaKnown RBP39.14■■■■□ 3.86
NSFL1C-205ENST00000470376 URB2Q14146 1524 aaKnown RBP39.1■■■■□ 3.85
NSFL1C-205ENST00000470376 TOPBP1Q92547 1522 aa38.81■■■■□ 3.8
NSFL1C-205ENST00000470376 ABCC8Q09428 1581 aa38.78■■■■□ 3.8
NSFL1C-205ENST00000470376 DNMBPQ6XZF7 1577 aa38.72■■■■□ 3.79
NSFL1C-205ENST00000470376 IFT140Q96RY7 1462 aa38.65■■■■□ 3.78
NSFL1C-205ENST00000470376 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
NSFL1C-205ENST00000470376 POLA1P09884 1462 aaPredicted RBP38.45■■■■□ 3.75
NSFL1C-205ENST00000470376 TARBP1Q13395 1621 aaKnown RBP38.4■■■■□ 3.74
NSFL1C-205ENST00000470376 CUX1P39880 1505 aa38.38■■■■□ 3.74
NSFL1C-205ENST00000470376 EIF4G3O43432 1585 aaKnown RBP38.33■■■■□ 3.73
NSFL1C-205ENST00000470376 SOGA1O94964 1423 aa38.33■■■■□ 3.73
NSFL1C-205ENST00000470376 RAD54L2Q9Y4B4 1467 aa38.33■■■■□ 3.73
NSFL1C-205ENST00000470376 FGD5Q6ZNL6 1462 aa38.32■■■■□ 3.72
NSFL1C-205ENST00000470376 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.722e-7■■□□□ 12.8
NSFL1C-205ENST00000470376 OSCARQ8IYS5 282 aa38.29■■■■□ 3.72
NSFL1C-205ENST00000470376 TDRD9Q8NDG6 1382 aaKnown RBP38.17■■■■□ 3.7
NSFL1C-205ENST00000470376 WDR97A6NE52 1622 aa38.03■■■■□ 3.68
NSFL1C-205ENST00000470376 WRNQ14191 1432 aaPredicted RBP eCLIP38.02■■■■□ 3.68
NSFL1C-205ENST00000470376 FBLN2P98095 1184 aa37.97■■■■□ 3.67
NSFL1C-205ENST00000470376 TOP2BQ02880 1626 aa37.95■■■■□ 3.67
NSFL1C-205ENST00000470376 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
NSFL1C-205ENST00000470376 CHD1O14646 1710 aa37.94■■■■□ 3.66
NSFL1C-205ENST00000470376 SYNJ1O43426 1573 aa37.93■■■■□ 3.66
NSFL1C-205ENST00000470376 ABCA10Q8WWZ4 1543 aa37.91■■■■□ 3.66
NSFL1C-205ENST00000470376 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
NSFL1C-205ENST00000470376 GRIN2BQ13224 1484 aa37.89■■■■□ 3.66
NSFL1C-205ENST00000470376 GAPVD1Q14C86 1478 aa37.86■■■■□ 3.65
NSFL1C-205ENST00000470376 TRIM41Q8WV44 630 aa37.81■■■■□ 3.64
NSFL1C-205ENST00000470376 MAGI1Q96QZ7 1491 aaPredicted RBP37.81■■■■□ 3.64
NSFL1C-205ENST00000470376 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
NSFL1C-205ENST00000470376 ABCA5Q8WWZ7 1642 aa37.78■■■■□ 3.64
NSFL1C-205ENST00000470376 CHMP7Q8WUX9 453 aaPredicted RBP37.77■■■■□ 3.64
NSFL1C-205ENST00000470376 SYNJ2O15056 1496 aa37.68■■■■□ 3.62
NSFL1C-205ENST00000470376 RIMBP3CA6NJZ7 1639 aa37.67■■■■□ 3.62
NSFL1C-205ENST00000470376 RIMBP3BA6NNM3 1639 aa37.67■■■■□ 3.62
NSFL1C-205ENST00000470376 RIMBP3Q9UFD9 1639 aa37.67■■■■□ 3.62
NSFL1C-205ENST00000470376 ARHGEF11O15085 1522 aa37.61■■■■□ 3.61
NSFL1C-205ENST00000470376 CLASP1Q7Z460 1538 aa37.48■■■■□ 3.59
NSFL1C-205ENST00000470376 ADAMTS12P58397 1594 aa37.45■■■■□ 3.59
NSFL1C-205ENST00000470376 ERICH3Q5RHP9 1530 aa37.45■■■■□ 3.59
NSFL1C-205ENST00000470376 FHAD1B1AJZ9 1412 aa37.4■■■■□ 3.58
NSFL1C-205ENST00000470376 GRIN2AQ12879 1464 aa37.39■■■■□ 3.58
NSFL1C-205ENST00000470376 CYB5RLQ6IPT4 315 aa37.38■■■■□ 3.57
NSFL1C-205ENST00000470376 ARAP1Q96P48 1450 aa37.28■■■■□ 3.56
NSFL1C-205ENST00000470376 KIF27Q86VH2 1401 aa37.26■■■■□ 3.55
NSFL1C-205ENST00000470376 CEP170Q5SW79 1584 aa37.22■■■■□ 3.55
NSFL1C-205ENST00000470376 NUP160Q12769 1436 aa37.22■■■■□ 3.55
NSFL1C-205ENST00000470376 IGF1RP08069 1367 aa37.17■■■■□ 3.54
NSFL1C-205ENST00000470376 CUL7Q14999 1698 aa37.04■■■■□ 3.52
NSFL1C-205ENST00000470376 ERCC6L2Q5T890 1561 aa36.99■■■■□ 3.51
NSFL1C-205ENST00000470376 SHROOM2Q13796 1616 aa36.98■■■■□ 3.51
NSFL1C-205ENST00000470376 CARMIL1Q5VZK9 1371 aa36.94■■■■□ 3.5
NSFL1C-205ENST00000470376 JPH4Q96JJ6 628 aa36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms