RNA–Protein interactions for RNA: ENST00000470150.5

CHRD-212, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-212ENST00000470150 NISCHQ9Y2I1 1504 aa28.15■■■□□ 2.1
CHRD-212ENST00000470150 DCAF8L2P0C7V8 631 aa26.93■■□□□ 1.9
CHRD-212ENST00000470150 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
CHRD-212ENST00000470150 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
CHRD-212ENST00000470150 ABCC9O60706 1549 aa24.62■■□□□ 1.53
CHRD-212ENST00000470150 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.432e-8■■■■□ 25.2
CHRD-212ENST00000470150 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
CHRD-212ENST00000470150 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
CHRD-212ENST00000470150 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
CHRD-212ENST00000470150 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
CHRD-212ENST00000470150 SCRIBQ14160 1630 aa23.16■■□□□ 1.3
CHRD-212ENST00000470150 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
CHRD-212ENST00000470150 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
CHRD-212ENST00000470150 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
CHRD-212ENST00000470150 NACADO15069 1562 aa22.8■■□□□ 1.24
CHRD-212ENST00000470150 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
CHRD-212ENST00000470150 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
CHRD-212ENST00000470150 UBTFP17480 764 aaKnown RBP22.56■■□□□ 1.2
CHRD-212ENST00000470150 ATP1B4Q9UN42 357 aaPredicted RBP22.47■■□□□ 1.19
CHRD-212ENST00000470150 APLP2Q06481 763 aa22.44■■□□□ 1.18
CHRD-212ENST00000470150 HRCP23327 699 aa22.43■■□□□ 1.18
CHRD-212ENST00000470150 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
CHRD-212ENST00000470150 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
CHRD-212ENST00000470150 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
CHRD-212ENST00000470150 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
CHRD-212ENST00000470150 LOC105371045A0A1W2PR82 267 aa22.21■■□□□ 1.15
CHRD-212ENST00000470150 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
CHRD-212ENST00000470150 FBLN2P98095 1184 aa22.15■■□□□ 1.14
CHRD-212ENST00000470150 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
CHRD-212ENST00000470150 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
CHRD-212ENST00000470150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
CHRD-212ENST00000470150 HNRNPUL2Q1KMD3 747 aaKnown RBP21.98■■□□□ 1.11
CHRD-212ENST00000470150 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
CHRD-212ENST00000470150 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
CHRD-212ENST00000470150 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
CHRD-212ENST00000470150 P3H3Q8IVL6 736 aa21.7■■□□□ 1.06
CHRD-212ENST00000470150 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
CHRD-212ENST00000470150 ERCC6Q03468 1493 aa21.65■■□□□ 1.06
CHRD-212ENST00000470150 ARID3CA6NKF2 412 aa21.63■■□□□ 1.05
CHRD-212ENST00000470150 ITGAEP38570 1179 aa21.61■■□□□ 1.05
CHRD-212ENST00000470150 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
CHRD-212ENST00000470150 ATAD2BQ9ULI0 1458 aa21.57■■□□□ 1.04
CHRD-212ENST00000470150 SMARCA2P51531 1590 aa21.56■■□□□ 1.04
CHRD-212ENST00000470150 WIZO95785 1651 aa21.55■■□□□ 1.04
CHRD-212ENST00000470150 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
CHRD-212ENST00000470150 CCDC88BA6NC98 1476 aa21.51■■□□□ 1.03
CHRD-212ENST00000470150 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
CHRD-212ENST00000470150 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
CHRD-212ENST00000470150 SMARCA4P51532 1647 aa21.45■■□□□ 1.03
CHRD-212ENST00000470150 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
CHRD-212ENST00000470150 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
CHRD-212ENST00000470150 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
CHRD-212ENST00000470150 CADPSQ9ULU8 1353 aa21.33■■□□□ 1.01
CHRD-212ENST00000470150 PELP1Q8IZL8 1130 aaKnown RBP21.31■■□□□ 1
CHRD-212ENST00000470150 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
CHRD-212ENST00000470150 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
CHRD-212ENST00000470150 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
CHRD-212ENST00000470150 FAM50AQ14320 339 aaKnown RBP21.23■□□□□ 0.99
CHRD-212ENST00000470150 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
CHRD-212ENST00000470150 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
CHRD-212ENST00000470150 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
CHRD-212ENST00000470150 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
CHRD-212ENST00000470150 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
CHRD-212ENST00000470150 CUX2O14529 1486 aa21.11■□□□□ 0.97
CHRD-212ENST00000470150 NPM1P06748 294 aaKnown RBP eCLIP21.08■□□□□ 0.96
CHRD-212ENST00000470150 SOGA1O94964 1423 aa21.07■□□□□ 0.96
CHRD-212ENST00000470150 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
CHRD-212ENST00000470150 ZNF777Q9ULD5 760 aaPredicted RBP21.07■□□□□ 0.96
CHRD-212ENST00000470150 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
CHRD-212ENST00000470150 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
CHRD-212ENST00000470150 NESP48681 1621 aa21.03■□□□□ 0.96
CHRD-212ENST00000470150 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
CHRD-212ENST00000470150 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.95
CHRD-212ENST00000470150 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
CHRD-212ENST00000470150 CDK11AQ9UQ88 783 aaPredicted RBP20.96■□□□□ 0.95
CHRD-212ENST00000470150 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
CHRD-212ENST00000470150 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
CHRD-212ENST00000470150 EEA1Q15075 1411 aa20.89■□□□□ 0.93
CHRD-212ENST00000470150 CLIP1P30622 1438 aa20.88■□□□□ 0.93
CHRD-212ENST00000470150 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
CHRD-212ENST00000470150 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
CHRD-212ENST00000470150 GTF3C3Q9Y5Q9 886 aa20.85■□□□□ 0.93
CHRD-212ENST00000470150 GOLGA3Q08378 1498 aa20.83■□□□□ 0.92
CHRD-212ENST00000470150 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
CHRD-212ENST00000470150 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
CHRD-212ENST00000470150 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
CHRD-212ENST00000470150 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
CHRD-212ENST00000470150 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
CHRD-212ENST00000470150 CFTRP13569 1480 aa20.74■□□□□ 0.91
CHRD-212ENST00000470150 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
CHRD-212ENST00000470150 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
CHRD-212ENST00000470150 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
CHRD-212ENST00000470150 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
CHRD-212ENST00000470150 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
CHRD-212ENST00000470150 PLEKHD1A6NEE1 506 aa20.69■□□□□ 0.9
CHRD-212ENST00000470150 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.95e-7■■■■□ 20.7
CHRD-212ENST00000470150 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.9
CHRD-212ENST00000470150 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
CHRD-212ENST00000470150 POLR3GLQ9BT43 218 aa20.62■□□□□ 0.89
CHRD-212ENST00000470150 JPH4Q96JJ6 628 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms