RNA–Protein interactions for RNA: ENST00000469559.5

ACAA1-214, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 2

Gene ACAA1, Length 4,720 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-214ENST00000469559 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
ACAA1-214ENST00000469559 DCAF8L2P0C7V8 631 aa21.26■□□□□ 0.99
ACAA1-214ENST00000469559 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
ACAA1-214ENST00000469559 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
ACAA1-214ENST00000469559 ZEB1P37275 1124 aaPredicted RBP19.04■□□□□ 0.64
ACAA1-214ENST00000469559 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
ACAA1-214ENST00000469559 ABCC9O60706 1549 aa18.99■□□□□ 0.63
ACAA1-214ENST00000469559 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
ACAA1-214ENST00000469559 APLP2Q06481 763 aa18.8■□□□□ 0.6
ACAA1-214ENST00000469559 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
ACAA1-214ENST00000469559 FAM9AQ8IZU1 332 aaPredicted RBP18.78■□□□□ 0.6
ACAA1-214ENST00000469559 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
ACAA1-214ENST00000469559 HRCP23327 699 aa18.69■□□□□ 0.58
ACAA1-214ENST00000469559 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
ACAA1-214ENST00000469559 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
ACAA1-214ENST00000469559 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
ACAA1-214ENST00000469559 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.56
ACAA1-214ENST00000469559 CENPBP07199 599 aaPredicted RBP18.5■□□□□ 0.55
ACAA1-214ENST00000469559 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.551e-7■□□□□ 9.6
ACAA1-214ENST00000469559 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
ACAA1-214ENST00000469559 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
ACAA1-214ENST00000469559 LOC105371045A0A1W2PR82 267 aa18.31■□□□□ 0.52
ACAA1-214ENST00000469559 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
ACAA1-214ENST00000469559 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
ACAA1-214ENST00000469559 MYT1Q01538 1121 aa18.05■□□□□ 0.48
ACAA1-214ENST00000469559 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
ACAA1-214ENST00000469559 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
ACAA1-214ENST00000469559 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
ACAA1-214ENST00000469559 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
ACAA1-214ENST00000469559 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
ACAA1-214ENST00000469559 NEFLP07196 543 aa17.76■□□□□ 0.43
ACAA1-214ENST00000469559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
ACAA1-214ENST00000469559 DIEXFQ68CQ4 756 aaKnown RBP17.73■□□□□ 0.43
ACAA1-214ENST00000469559 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
ACAA1-214ENST00000469559 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
ACAA1-214ENST00000469559 NACADO15069 1562 aa17.68■□□□□ 0.42
ACAA1-214ENST00000469559 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
ACAA1-214ENST00000469559 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
ACAA1-214ENST00000469559 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
ACAA1-214ENST00000469559 FBLN2P98095 1184 aa17.58■□□□□ 0.41
ACAA1-214ENST00000469559 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
ACAA1-214ENST00000469559 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
ACAA1-214ENST00000469559 EEA1Q15075 1411 aa17.52■□□□□ 0.4
ACAA1-214ENST00000469559 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
ACAA1-214ENST00000469559 ITGAEP38570 1179 aa17.48■□□□□ 0.39
ACAA1-214ENST00000469559 ACIN1Q9UKV3 1341 aaKnown RBP17.38■□□□□ 0.37
ACAA1-214ENST00000469559 CLSPNQ9HAW4 1339 aa17.35■□□□□ 0.37
ACAA1-214ENST00000469559 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
ACAA1-214ENST00000469559 GTF3C3Q9Y5Q9 886 aa17.31■□□□□ 0.36
ACAA1-214ENST00000469559 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
ACAA1-214ENST00000469559 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
ACAA1-214ENST00000469559 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
ACAA1-214ENST00000469559 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
ACAA1-214ENST00000469559 CLIP1P30622 1438 aa17.2■□□□□ 0.34
ACAA1-214ENST00000469559 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
ACAA1-214ENST00000469559 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
ACAA1-214ENST00000469559 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
ACAA1-214ENST00000469559 ANP32CO43423 234 aa17.15■□□□□ 0.34
ACAA1-214ENST00000469559 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
ACAA1-214ENST00000469559 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
ACAA1-214ENST00000469559 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
ACAA1-214ENST00000469559 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
ACAA1-214ENST00000469559 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
ACAA1-214ENST00000469559 CHMP7Q8WUX9 453 aaPredicted RBP17.05■□□□□ 0.32
ACAA1-214ENST00000469559 MROH2BQ7Z745 1585 aa17.05■□□□□ 0.32
ACAA1-214ENST00000469559 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
ACAA1-214ENST00000469559 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
ACAA1-214ENST00000469559 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
ACAA1-214ENST00000469559 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
ACAA1-214ENST00000469559 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
ACAA1-214ENST00000469559 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
ACAA1-214ENST00000469559 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
ACAA1-214ENST00000469559 DAXXQ9UER7 740 aaPredicted RBP16.89■□□□□ 0.3
ACAA1-214ENST00000469559 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
ACAA1-214ENST00000469559 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
ACAA1-214ENST00000469559 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
ACAA1-214ENST00000469559 SOGA1O94964 1423 aa16.84■□□□□ 0.29
ACAA1-214ENST00000469559 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.29
ACAA1-214ENST00000469559 ARID3CA6NKF2 412 aa16.83■□□□□ 0.28
ACAA1-214ENST00000469559 WIZO95785 1651 aa16.82■□□□□ 0.28
ACAA1-214ENST00000469559 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
ACAA1-214ENST00000469559 MIER1Q8N108 512 aa16.81■□□□□ 0.28
ACAA1-214ENST00000469559 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
ACAA1-214ENST00000469559 BCANQ96GW7 911 aa16.77■□□□□ 0.27
ACAA1-214ENST00000469559 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
ACAA1-214ENST00000469559 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
ACAA1-214ENST00000469559 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
ACAA1-214ENST00000469559 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
ACAA1-214ENST00000469559 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
ACAA1-214ENST00000469559 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
ACAA1-214ENST00000469559 CCNB3Q8WWL7 1395 aa16.69■□□□□ 0.26
ACAA1-214ENST00000469559 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
ACAA1-214ENST00000469559 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
ACAA1-214ENST00000469559 FKBP8Q14318 412 aa16.67■□□□□ 0.26
ACAA1-214ENST00000469559 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
ACAA1-214ENST00000469559 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
ACAA1-214ENST00000469559 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
ACAA1-214ENST00000469559 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
ACAA1-214ENST00000469559 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
ACAA1-214ENST00000469559 CUX2O14529 1486 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms