RNA–Protein interactions for RNA: ENST00000469553.6

RABGAP1L-212, Transcript of RAB GTPase activating protein 1 like, humanhuman

TSL 1 (best)

Gene RABGAP1L, Length 2,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1L-212ENST00000469553 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
RABGAP1L-212ENST00000469553 NISCHQ9Y2I1 1504 aa12.15□□□□□ -0.46
RABGAP1L-212ENST00000469553 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
RABGAP1L-212ENST00000469553 POTEDQ86YR6 584 aa10.92□□□□□ -0.66
RABGAP1L-212ENST00000469553 SENP3Q9H4L4 574 aaPredicted RBP10.84□□□□□ -0.67
RABGAP1L-212ENST00000469553 ABCC9O60706 1549 aa10.81□□□□□ -0.68
RABGAP1L-212ENST00000469553 DNAJC5BQ9UF47 199 aa10.53□□□□□ -0.72
RABGAP1L-212ENST00000469553 CCDC180Q9P1Z9 1646 aa10.52□□□□□ -0.73
RABGAP1L-212ENST00000469553 PHF23Q9BUL5 403 aaPredicted RBP10.51□□□□□ -0.73
RABGAP1L-212ENST00000469553 ZCCHC6Q5VYS8 1495 aaKnown RBP10.31□□□□□ -0.76
RABGAP1L-212ENST00000469553 SHROOM4Q9ULL8 1493 aa10.28□□□□□ -0.76
RABGAP1L-212ENST00000469553 RB1CC1Q8TDY2 1594 aa10.17□□□□□ -0.78
RABGAP1L-212ENST00000469553 FOXD1Q16676 465 aa10.1□□□□□ -0.79
RABGAP1L-212ENST00000469553 SUPT5HO00267 1087 aaKnown RBP10.09□□□□□ -0.79
RABGAP1L-212ENST00000469553 NACADO15069 1562 aa10.03□□□□□ -0.8
RABGAP1L-212ENST00000469553 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.81
RABGAP1L-212ENST00000469553 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
RABGAP1L-212ENST00000469553 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
RABGAP1L-212ENST00000469553 MYO15BQ96JP2 1530 aa9.95□□□□□ -0.82
RABGAP1L-212ENST00000469553 UNC13AQ9UPW8 1703 aa9.94□□□□□ -0.82
RABGAP1L-212ENST00000469553 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
RABGAP1L-212ENST00000469553 MSH5O43196 834 aa9.89□□□□□ -0.83
RABGAP1L-212ENST00000469553 DCAF8L2P0C7V8 631 aa9.86□□□□□ -0.83
RABGAP1L-212ENST00000469553 CECR2Q9BXF3 1484 aa9.81□□□□□ -0.84
RABGAP1L-212ENST00000469553 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
RABGAP1L-212ENST00000469553 HRCP23327 699 aa9.73□□□□□ -0.85
RABGAP1L-212ENST00000469553 PLPPR3Q6T4P5 718 aa9.7□□□□□ -0.86
RABGAP1L-212ENST00000469553 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
RABGAP1L-212ENST00000469553 RSF1Q96T23 1441 aaPredicted RBP9.63□□□□□ -0.87
RABGAP1L-212ENST00000469553 PCGF6Q9BYE7 350 aa9.62□□□□□ -0.87
RABGAP1L-212ENST00000469553 SCRIBQ14160 1630 aa9.62□□□□□ -0.87
RABGAP1L-212ENST00000469553 LOC105371045A0A1W2PR82 267 aa9.59□□□□□ -0.87
RABGAP1L-212ENST00000469553 CUX2O14529 1486 aa9.55□□□□□ -0.88
RABGAP1L-212ENST00000469553 PPARGC1BQ86YN6 1023 aaKnown RBP9.47□□□□□ -0.89
RABGAP1L-212ENST00000469553 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.89
RABGAP1L-212ENST00000469553 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
RABGAP1L-212ENST00000469553 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
RABGAP1L-212ENST00000469553 WIZO95785 1651 aa9.39□□□□□ -0.91
RABGAP1L-212ENST00000469553 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
RABGAP1L-212ENST00000469553 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
RABGAP1L-212ENST00000469553 FAM9AQ8IZU1 332 aaPredicted RBP9.3□□□□□ -0.92
RABGAP1L-212ENST00000469553 PIAS4Q8N2W9 510 aaPredicted RBP9.28□□□□□ -0.92
RABGAP1L-212ENST00000469553 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.93
RABGAP1L-212ENST00000469553 NCAPD3P42695 1498 aa9.26□□□□□ -0.93
RABGAP1L-212ENST00000469553 TOP2AP11388 1531 aaKnown RBP9.25□□□□□ -0.93
RABGAP1L-212ENST00000469553 SMARCA4P51532 1647 aa9.24□□□□□ -0.93
RABGAP1L-212ENST00000469553 THOC2Q8NI27 1593 aaKnown RBP9.23□□□□□ -0.93
RABGAP1L-212ENST00000469553 SMARCA2P51531 1590 aa9.21□□□□□ -0.94
RABGAP1L-212ENST00000469553 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
RABGAP1L-212ENST00000469553 NESP48681 1621 aa9.19□□□□□ -0.94
RABGAP1L-212ENST00000469553 ABCC8Q09428 1581 aa9.18□□□□□ -0.94
RABGAP1L-212ENST00000469553 EHMT2Q96KQ7 1210 aa9.17□□□□□ -0.94
RABGAP1L-212ENST00000469553 PPP6R1Q9UPN7 881 aa9.17□□□□□ -0.94
RABGAP1L-212ENST00000469553 ADRA2BP18089 450 aa9.16□□□□□ -0.94
RABGAP1L-212ENST00000469553 HMGXB3Q12766 1538 aa9.16□□□□□ -0.94
RABGAP1L-212ENST00000469553 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
RABGAP1L-212ENST00000469553 WRNQ14191 1432 aaPredicted RBP eCLIP9.15□□□□□ -0.95
RABGAP1L-212ENST00000469553 PEG3Q9GZU2 1588 aa9.11□□□□□ -0.95
RABGAP1L-212ENST00000469553 SOGA1O94964 1423 aa9.1□□□□□ -0.95
RABGAP1L-212ENST00000469553 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
RABGAP1L-212ENST00000469553 EEA1Q15075 1411 aa9.09□□□□□ -0.95
RABGAP1L-212ENST00000469553 CEP162Q5TB80 1403 aa9.09□□□□□ -0.95
RABGAP1L-212ENST00000469553 TNIKQ9UKE5 1360 aa9.09□□□□□ -0.96
RABGAP1L-212ENST00000469553 KIF21AQ7Z4S6 1674 aa9.07□□□□□ -0.96
RABGAP1L-212ENST00000469553 RUSC2Q8N2Y8 1516 aa9.06□□□□□ -0.96
RABGAP1L-212ENST00000469553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
RABGAP1L-212ENST00000469553 CSRNP3Q8WYN3 585 aa9.03□□□□□ -0.96
RABGAP1L-212ENST00000469553 PDS5BQ9NTI5 1447 aa9.02□□□□□ -0.96
RABGAP1L-212ENST00000469553 WDR62O43379 1518 aa9.01□□□□□ -0.97
RABGAP1L-212ENST00000469553 GOLGA3Q08378 1498 aa9.01□□□□□ -0.97
RABGAP1L-212ENST00000469553 BAZ1BQ9UIG0 1483 aaKnown RBP9.01□□□□□ -0.97
RABGAP1L-212ENST00000469553 MRC2Q9UBG0 1479 aa9□□□□□ -0.97
RABGAP1L-212ENST00000469553 SYNJ1O43426 1573 aa9□□□□□ -0.97
RABGAP1L-212ENST00000469553 CCER1Q8TC90 406 aaPredicted RBP8.99□□□□□ -0.97
RABGAP1L-212ENST00000469553 KIF21BO75037 1637 aa8.99□□□□□ -0.97
RABGAP1L-212ENST00000469553 SCAF1Q9H7N4 1312 aaKnown RBP8.98□□□□□ -0.97
RABGAP1L-212ENST00000469553 OSCARQ8IYS5 282 aa8.96□□□□□ -0.97
RABGAP1L-212ENST00000469553 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.98
RABGAP1L-212ENST00000469553 RIMBP3CA6NJZ7 1639 aa8.94□□□□□ -0.98
RABGAP1L-212ENST00000469553 RIMBP3BA6NNM3 1639 aa8.94□□□□□ -0.98
RABGAP1L-212ENST00000469553 RIMBP3Q9UFD9 1639 aa8.94□□□□□ -0.98
RABGAP1L-212ENST00000469553 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
RABGAP1L-212ENST00000469553 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
RABGAP1L-212ENST00000469553 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
RABGAP1L-212ENST00000469553 TTBK1Q5TCY1 1321 aaPredicted RBP8.9□□□□□ -0.98
RABGAP1L-212ENST00000469553 TOP2BQ02880 1626 aa8.9□□□□□ -0.99
RABGAP1L-212ENST00000469553 CLIP1P30622 1438 aa8.9□□□□□ -0.99
RABGAP1L-212ENST00000469553 VPS8Q8N3P4 1428 aa8.89□□□□□ -0.99
RABGAP1L-212ENST00000469553 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
RABGAP1L-212ENST00000469553 DIEXFQ68CQ4 756 aaKnown RBP8.88□□□□□ -0.99
RABGAP1L-212ENST00000469553 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
RABGAP1L-212ENST00000469553 ACIN1Q9UKV3 1341 aaKnown RBP8.87□□□□□ -0.99
RABGAP1L-212ENST00000469553 ARHGEF11O15085 1522 aa8.87□□□□□ -0.99
RABGAP1L-212ENST00000469553 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
RABGAP1L-212ENST00000469553 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
RABGAP1L-212ENST00000469553 ERICH3Q5RHP9 1530 aa8.83□□□□□ -1
RABGAP1L-212ENST00000469553 PRXQ9BXM0 1461 aa8.83□□□□□ -1
RABGAP1L-212ENST00000469553 ZNF316A6NFI3 1004 aaPredicted RBP8.81□□□□□ -1
RABGAP1L-212ENST00000469553 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
RABGAP1L-212ENST00000469553 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms