RNA–Protein interactions for RNA: ENST00000469316.5

RNF8-203, Transcript of ring finger protein 8, humanhuman

TSL 4

Gene RNF8, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-203ENST00000469316 NISCHQ9Y2I1 1504 aa53.3■■■■■ 6.12
RNF8-203ENST00000469316 CCDC180Q9P1Z9 1646 aa47.62■■■■■ 5.21
RNF8-203ENST00000469316 ABCC9O60706 1549 aa47.42■■■■■ 5.18
RNF8-203ENST00000469316 RB1CC1Q8TDY2 1594 aa45.25■■■■■ 4.83
RNF8-203ENST00000469316 DCAF8L2P0C7V8 631 aa45.04■■■■■ 4.8
RNF8-203ENST00000469316 NACADO15069 1562 aa45.02■■■■■ 4.8
RNF8-203ENST00000469316 MYO15BQ96JP2 1530 aa44.5■■■■■ 4.71
RNF8-203ENST00000469316 PABPN1Q86U42 306 aaKnown RBP eCLIP44.26■■■■■ 4.68
RNF8-203ENST00000469316 ZCCHC6Q5VYS8 1495 aaKnown RBP44.21■■■■■ 4.67
RNF8-203ENST00000469316 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
RNF8-203ENST00000469316 UNC13AQ9UPW8 1703 aa44.05■■■■■ 4.64
RNF8-203ENST00000469316 DCAF1Q9Y4B6 1507 aa44.04■■■■■ 4.64
RNF8-203ENST00000469316 BICRAQ9NZM4 1560 aa43.84■■■■■ 4.61
RNF8-203ENST00000469316 SCRIBQ14160 1630 aa43.44■■■■■ 4.55
RNF8-203ENST00000469316 SHROOM4Q9ULL8 1493 aa43.38■■■■■ 4.53
RNF8-203ENST00000469316 CC2D2AQ9P2K1 1620 aa42.79■■■■■ 4.44
RNF8-203ENST00000469316 EIF4G1Q04637 1599 aaKnown RBP42.79■■■■■ 4.44
RNF8-203ENST00000469316 CECR2Q9BXF3 1484 aa42.69■■■■■ 4.42
RNF8-203ENST00000469316 NCAPD3P42695 1498 aa41.59■■■■■ 4.25
RNF8-203ENST00000469316 ATAD2BQ9ULI0 1458 aa41.48■■■■■ 4.23
RNF8-203ENST00000469316 SMARCA4P51532 1647 aa41.47■■■■■ 4.23
RNF8-203ENST00000469316 SMARCA2P51531 1590 aa41.39■■■■■ 4.22
RNF8-203ENST00000469316 BAZ1AQ9NRL2 1556 aaPredicted RBP41.37■■■■■ 4.21
RNF8-203ENST00000469316 HMGXB3Q12766 1538 aa41.26■■■■■ 4.2
RNF8-203ENST00000469316 BAZ1BQ9UIG0 1483 aaKnown RBP41.13■■■■■ 4.17
RNF8-203ENST00000469316 MROH2BQ7Z745 1585 aa41.06■■■■■ 4.16
RNF8-203ENST00000469316 PEG3Q9GZU2 1588 aa41.06■■■■■ 4.16
RNF8-203ENST00000469316 ERCC6Q03468 1493 aa40.97■■■■■ 4.15
RNF8-203ENST00000469316 NESP48681 1621 aa40.79■■■■■ 4.12
RNF8-203ENST00000469316 CUX2O14529 1486 aa40.75■■■■■ 4.11
RNF8-203ENST00000469316 LAMC3Q9Y6N6 1575 aa40.56■■■■■ 4.08
RNF8-203ENST00000469316 WIZO95785 1651 aa40.54■■■■■ 4.08
RNF8-203ENST00000469316 DNAJC5Q9H3Z4 198 aa40.43■■■■■ 4.06
RNF8-203ENST00000469316 PDS5BQ9NTI5 1447 aa40.4■■■■■ 4.06
RNF8-203ENST00000469316 CADPSQ9ULU8 1353 aa40.37■■■■■ 4.05
RNF8-203ENST00000469316 RSF1Q96T23 1441 aaPredicted RBP40.36■■■■■ 4.05
RNF8-203ENST00000469316 THOC2Q8NI27 1593 aaKnown RBP40.25■■■■■ 4.03
RNF8-203ENST00000469316 KIF21AQ7Z4S6 1674 aa40.19■■■■■ 4.02
RNF8-203ENST00000469316 TOP2AP11388 1531 aaKnown RBP40.09■■■■■ 4.01
RNF8-203ENST00000469316 MRC2Q9UBG0 1479 aa39.98■■■■□ 3.99
RNF8-203ENST00000469316 CFTRP13569 1480 aa39.94■■■■□ 3.98
RNF8-203ENST00000469316 CEP164Q9UPV0 1460 aa39.89■■■■□ 3.98
RNF8-203ENST00000469316 FANCD2Q9BXW9 1451 aa39.88■■■■□ 3.97
RNF8-203ENST00000469316 WDR62O43379 1518 aa39.83■■■■□ 3.97
RNF8-203ENST00000469316 CCDC88BA6NC98 1476 aa39.67■■■■□ 3.94
RNF8-203ENST00000469316 URB2Q14146 1524 aaKnown RBP39.49■■■■□ 3.91
RNF8-203ENST00000469316 PRDM2Q13029 1718 aa39.4■■■■□ 3.9
RNF8-203ENST00000469316 TOPBP1Q92547 1522 aa39.14■■■■□ 3.86
RNF8-203ENST00000469316 ABCC8Q09428 1581 aa39.13■■■■□ 3.85
RNF8-203ENST00000469316 IFT140Q96RY7 1462 aa39.1■■■■□ 3.85
RNF8-203ENST00000469316 OSCARQ8IYS5 282 aa39.05■■■■□ 3.84
RNF8-203ENST00000469316 DNMBPQ6XZF7 1577 aa39■■■■□ 3.83
RNF8-203ENST00000469316 ZNF608Q9ULD9 1512 aaPredicted RBP38.96■■■■□ 3.83
RNF8-203ENST00000469316 SUPT5HO00267 1087 aaKnown RBP38.92■■■■□ 3.82
RNF8-203ENST00000469316 TRIM41Q8WV44 630 aa38.82■■■■□ 3.8
RNF8-203ENST00000469316 POLA1P09884 1462 aaPredicted RBP38.75■■■■□ 3.79
RNF8-203ENST00000469316 EIF4G3O43432 1585 aaKnown RBP38.72■■■■□ 3.79
RNF8-203ENST00000469316 TARBP1Q13395 1621 aaKnown RBP38.71■■■■□ 3.79
RNF8-203ENST00000469316 AQRO60306 1485 aaKnown RBP eCLIP38.69■■■■□ 3.78
RNF8-203ENST00000469316 SOGA1O94964 1423 aa38.65■■■■□ 3.78
RNF8-203ENST00000469316 RAD54L2Q9Y4B4 1467 aa38.62■■■■□ 3.77
RNF8-203ENST00000469316 FGD5Q6ZNL6 1462 aa38.56■■■■□ 3.76
RNF8-203ENST00000469316 CUX1P39880 1505 aa38.54■■■■□ 3.76
RNF8-203ENST00000469316 TDRD9Q8NDG6 1382 aaKnown RBP38.54■■■■□ 3.76
RNF8-203ENST00000469316 FBLN2P98095 1184 aa38.48■■■■□ 3.75
RNF8-203ENST00000469316 WDR97A6NE52 1622 aa38.37■■■■□ 3.73
RNF8-203ENST00000469316 RIMBP3CA6NJZ7 1639 aa38.33■■■■□ 3.73
RNF8-203ENST00000469316 RIMBP3BA6NNM3 1639 aa38.33■■■■□ 3.73
RNF8-203ENST00000469316 RIMBP3Q9UFD9 1639 aa38.33■■■■□ 3.73
RNF8-203ENST00000469316 CHD1O14646 1710 aa38.32■■■■□ 3.73
RNF8-203ENST00000469316 ARHGEF11O15085 1522 aa38.29■■■■□ 3.72
RNF8-203ENST00000469316 SNAPC4Q5SXM2 1469 aa38.28■■■■□ 3.72
RNF8-203ENST00000469316 GRIN2BQ13224 1484 aa38.26■■■■□ 3.72
RNF8-203ENST00000469316 CHMP7Q8WUX9 453 aaPredicted RBP38.24■■■■□ 3.71
RNF8-203ENST00000469316 MAGI1Q96QZ7 1491 aaPredicted RBP38.21■■■■□ 3.71
RNF8-203ENST00000469316 GAPVD1Q14C86 1478 aa38.15■■■■□ 3.7
RNF8-203ENST00000469316 ABCA10Q8WWZ4 1543 aa38.15■■■■□ 3.7
RNF8-203ENST00000469316 WRNQ14191 1432 aaPredicted RBP eCLIP38.12■■■■□ 3.69
RNF8-203ENST00000469316 CYB5RLQ6IPT4 315 aa38.1■■■■□ 3.69
RNF8-203ENST00000469316 SYNJ2O15056 1496 aa38.09■■■■□ 3.69
RNF8-203ENST00000469316 TOP2BQ02880 1626 aa38.01■■■■□ 3.68
RNF8-203ENST00000469316 SYNJ1O43426 1573 aa38.01■■■■□ 3.67
RNF8-203ENST00000469316 PBRM1Q86U86 1689 aa37.99■■■■□ 3.67
RNF8-203ENST00000469316 ABCA5Q8WWZ7 1642 aa37.99■■■■□ 3.67
RNF8-203ENST00000469316 BIVM-ERCC5R4GMW8 1640 aa37.98■■■■□ 3.67
RNF8-203ENST00000469316 CLASP1Q7Z460 1538 aa37.95■■■■□ 3.67
RNF8-203ENST00000469316 ARAP1Q96P48 1450 aa37.92■■■■□ 3.66
RNF8-203ENST00000469316 GRIN2AQ12879 1464 aa37.74■■■■□ 3.63
RNF8-203ENST00000469316 FHAD1B1AJZ9 1412 aa37.7■■■■□ 3.63
RNF8-203ENST00000469316 ADAMTS12P58397 1594 aa37.69■■■■□ 3.62
RNF8-203ENST00000469316 ERICH3Q5RHP9 1530 aa37.67■■■■□ 3.62
RNF8-203ENST00000469316 TRHP20396 242 aaPredicted RBP37.61■■■■□ 3.61
RNF8-203ENST00000469316 NUP160Q12769 1436 aa37.6■■■■□ 3.61
RNF8-203ENST00000469316 CEP170Q5SW79 1584 aa37.53■■■■□ 3.6
RNF8-203ENST00000469316 KIF27Q86VH2 1401 aa37.38■■■■□ 3.57
RNF8-203ENST00000469316 ERCC6L2Q5T890 1561 aa37.37■■■■□ 3.57
RNF8-203ENST00000469316 SHROOM2Q13796 1616 aa37.32■■■■□ 3.57
RNF8-203ENST00000469316 IGF1RP08069 1367 aa37.31■■■■□ 3.56
RNF8-203ENST00000469316 JPH4Q96JJ6 628 aa37.31■■■■□ 3.56
RNF8-203ENST00000469316 PRG4Q92954 1404 aaPredicted RBP37.26■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms