RNA–Protein interactions for RNA: ENST00000469316.5
Retrieved 8 of 8 RNA–protein pairs in 3.4 ms
RNF8-203, Transcript of ring finger protein 8, human
TSL 4
Gene RNF8, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
RNF8-203 | ENST00000469316 | ZNF622 | Q969S3 | 477 aa | Known RBP eCLIP | 28.42 | ■■■□□ 2.14 | 5e-15 | ■■■■■ 59.5 |
RNF8-203 | ENST00000469316 | GRWD1 | Q9BQ67 | 446 aa | Known RBP eCLIP | 33.37 | ■■■□□ 2.93 | 1e-6 | ■■■■□ 24.7 |
RNF8-203 | ENST00000469316 | GTF2F1 | P35269 | 517 aa | Known RBP eCLIP | 24.17 | ■■□□□ 1.46 | 5e-6 | ■■■■□ 24.4 |
RNF8-203 | ENST00000469316 | CSTF2T | Q9H0L4 | 616 aa | Known RBP eCLIP | 20.38 | ■□□□□ 0.85 | 4e-6 | ■■■■□ 20.4 |
RNF8-203 | ENST00000469316 | UCHL5 | Q9Y5K5 | 329 aa | Known RBP eCLIP | 21.61 | ■■□□□ 1.05 | 2e-6 | ■■■□□ 18.9 |
RNF8-203 | ENST00000469316 | PRPF4 | O43172 | 522 aa | Known RBP eCLIP | 20.55 | ■□□□□ 0.88 | 7e-9 | ■■■□□ 16.6 |
RNF8-203 | ENST00000469316 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 21.77 | ■■□□□ 1.08 | 3e-8 | ■■□□□ 13.3 |
RNF8-203 | ENST00000469316 | GRSF1 | Q12849 | 480 aa | Known RBP eCLIP | 22.99 | ■■□□□ 1.27 | 1e-6 | ■■□□□ 12.8 |