RNA–Protein interactions for RNA: ENST00000469025.1

OPTN-209, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 642 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-209ENST00000469025 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
OPTN-209ENST00000469025 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
OPTN-209ENST00000469025 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
OPTN-209ENST00000469025 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
OPTN-209ENST00000469025 FOXD1Q16676 465 aa18.5■□□□□ 0.55
OPTN-209ENST00000469025 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
OPTN-209ENST00000469025 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
OPTN-209ENST00000469025 ADRA2BP18089 450 aa17.43■□□□□ 0.38
OPTN-209ENST00000469025 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
OPTN-209ENST00000469025 MSH5O43196 834 aa17.26■□□□□ 0.35
OPTN-209ENST00000469025 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
OPTN-209ENST00000469025 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
OPTN-209ENST00000469025 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
OPTN-209ENST00000469025 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
OPTN-209ENST00000469025 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
OPTN-209ENST00000469025 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
OPTN-209ENST00000469025 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
OPTN-209ENST00000469025 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
OPTN-209ENST00000469025 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
OPTN-209ENST00000469025 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
OPTN-209ENST00000469025 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
OPTN-209ENST00000469025 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
OPTN-209ENST00000469025 ABCC9O60706 1549 aa15.12■□□□□ 0.01
OPTN-209ENST00000469025 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
OPTN-209ENST00000469025 KCNA4P22459 653 aa15.01□□□□□ -0.01
OPTN-209ENST00000469025 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
OPTN-209ENST00000469025 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
OPTN-209ENST00000469025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.071e-9■■□□□ 12.2
OPTN-209ENST00000469025 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
OPTN-209ENST00000469025 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
OPTN-209ENST00000469025 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
OPTN-209ENST00000469025 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
OPTN-209ENST00000469025 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
OPTN-209ENST00000469025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
OPTN-209ENST00000469025 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
OPTN-209ENST00000469025 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
OPTN-209ENST00000469025 CAPN15O75808 1086 aa14□□□□□ -0.17
OPTN-209ENST00000469025 APLP2Q06481 763 aa14□□□□□ -0.17
OPTN-209ENST00000469025 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
OPTN-209ENST00000469025 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
OPTN-209ENST00000469025 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
OPTN-209ENST00000469025 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
OPTN-209ENST00000469025 DSG3P32926 999 aa13.87□□□□□ -0.19
OPTN-209ENST00000469025 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
OPTN-209ENST00000469025 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
OPTN-209ENST00000469025 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
OPTN-209ENST00000469025 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
OPTN-209ENST00000469025 ZBTB22O15209 634 aa13.81□□□□□ -0.2
OPTN-209ENST00000469025 CCDC180Q9P1Z9 1646 aa13.81□□□□□ -0.2
OPTN-209ENST00000469025 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.27e-9■□□□□ 10
OPTN-209ENST00000469025 CUX2O14529 1486 aa13.75□□□□□ -0.21
OPTN-209ENST00000469025 ABCB7O75027 752 aa13.69□□□□□ -0.22
OPTN-209ENST00000469025 CC2D2AQ9P2K1 1620 aa13.65□□□□□ -0.22
OPTN-209ENST00000469025 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
OPTN-209ENST00000469025 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
OPTN-209ENST00000469025 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
OPTN-209ENST00000469025 POLA2Q14181 598 aa13.52□□□□□ -0.25
OPTN-209ENST00000469025 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
OPTN-209ENST00000469025 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
OPTN-209ENST00000469025 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
OPTN-209ENST00000469025 NACADO15069 1562 aa13.38□□□□□ -0.27
OPTN-209ENST00000469025 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
OPTN-209ENST00000469025 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
OPTN-209ENST00000469025 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
OPTN-209ENST00000469025 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
OPTN-209ENST00000469025 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
OPTN-209ENST00000469025 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
OPTN-209ENST00000469025 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
OPTN-209ENST00000469025 FBLN2P98095 1184 aa13.07□□□□□ -0.32
OPTN-209ENST00000469025 AKT1S1Q96B36 256 aa13□□□□□ -0.33
OPTN-209ENST00000469025 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
OPTN-209ENST00000469025 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
OPTN-209ENST00000469025 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
OPTN-209ENST00000469025 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
OPTN-209ENST00000469025 POTEHQ6S545 545 aa12.9□□□□□ -0.34
OPTN-209ENST00000469025 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
OPTN-209ENST00000469025 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
OPTN-209ENST00000469025 RIMBP3CA6NJZ7 1639 aa12.84□□□□□ -0.35
OPTN-209ENST00000469025 RIMBP3BA6NNM3 1639 aa12.84□□□□□ -0.35
OPTN-209ENST00000469025 RIMBP3Q9UFD9 1639 aa12.84□□□□□ -0.35
OPTN-209ENST00000469025 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
OPTN-209ENST00000469025 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
OPTN-209ENST00000469025 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
OPTN-209ENST00000469025 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
OPTN-209ENST00000469025 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
OPTN-209ENST00000469025 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
OPTN-209ENST00000469025 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
OPTN-209ENST00000469025 SOCS7O14512 581 aa12.65□□□□□ -0.38
OPTN-209ENST00000469025 ARHGEF11O15085 1522 aa12.64□□□□□ -0.39
OPTN-209ENST00000469025 LMTK3Q96Q04 1460 aa12.64□□□□□ -0.39
OPTN-209ENST00000469025 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
OPTN-209ENST00000469025 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
OPTN-209ENST00000469025 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
OPTN-209ENST00000469025 NESP48681 1621 aa12.57□□□□□ -0.4
OPTN-209ENST00000469025 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
OPTN-209ENST00000469025 CYB5RLQ6IPT4 315 aa12.54□□□□□ -0.4
OPTN-209ENST00000469025 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
OPTN-209ENST00000469025 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
OPTN-209ENST00000469025 SMARCA2P51531 1590 aa12.5□□□□□ -0.41
OPTN-209ENST00000469025 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms