RNA–Protein interactions for RNA: ENST00000468983.1

ARRDC1-206, Transcript of arrestin domain containing 1, humanhuman

TSL 4

Gene ARRDC1, Length 386 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-206ENST00000468983 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
ARRDC1-206ENST00000468983 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
ARRDC1-206ENST00000468983 ABCC9O60706 1549 aa26.8■■□□□ 1.88
ARRDC1-206ENST00000468983 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
ARRDC1-206ENST00000468983 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
ARRDC1-206ENST00000468983 NACADO15069 1562 aa25.52■■□□□ 1.68
ARRDC1-206ENST00000468983 ZCCHC6Q5VYS8 1495 aaKnown RBP25.26■■□□□ 1.63
ARRDC1-206ENST00000468983 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
ARRDC1-206ENST00000468983 UNC13AQ9UPW8 1703 aa25.11■■□□□ 1.61
ARRDC1-206ENST00000468983 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
ARRDC1-206ENST00000468983 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
ARRDC1-206ENST00000468983 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
ARRDC1-206ENST00000468983 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
ARRDC1-206ENST00000468983 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
ARRDC1-206ENST00000468983 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.51
ARRDC1-206ENST00000468983 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
ARRDC1-206ENST00000468983 CC2D2AQ9P2K1 1620 aa24.21■■□□□ 1.47
ARRDC1-206ENST00000468983 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
ARRDC1-206ENST00000468983 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
ARRDC1-206ENST00000468983 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
ARRDC1-206ENST00000468983 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
ARRDC1-206ENST00000468983 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
ARRDC1-206ENST00000468983 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
ARRDC1-206ENST00000468983 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
ARRDC1-206ENST00000468983 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
ARRDC1-206ENST00000468983 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
ARRDC1-206ENST00000468983 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
ARRDC1-206ENST00000468983 WIZO95785 1651 aa23.22■■□□□ 1.31
ARRDC1-206ENST00000468983 NESP48681 1621 aa23.15■■□□□ 1.3
ARRDC1-206ENST00000468983 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
ARRDC1-206ENST00000468983 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
ARRDC1-206ENST00000468983 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
ARRDC1-206ENST00000468983 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
ARRDC1-206ENST00000468983 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
ARRDC1-206ENST00000468983 CUX2O14529 1486 aa22.86■■□□□ 1.25
ARRDC1-206ENST00000468983 KIF21AQ7Z4S6 1674 aa22.84■■□□□ 1.25
ARRDC1-206ENST00000468983 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
ARRDC1-206ENST00000468983 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
ARRDC1-206ENST00000468983 CFTRP13569 1480 aa22.7■■□□□ 1.22
ARRDC1-206ENST00000468983 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
ARRDC1-206ENST00000468983 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
ARRDC1-206ENST00000468983 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
ARRDC1-206ENST00000468983 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
ARRDC1-206ENST00000468983 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
ARRDC1-206ENST00000468983 WDR62O43379 1518 aa22.53■■□□□ 1.2
ARRDC1-206ENST00000468983 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
ARRDC1-206ENST00000468983 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
ARRDC1-206ENST00000468983 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
ARRDC1-206ENST00000468983 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
ARRDC1-206ENST00000468983 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
ARRDC1-206ENST00000468983 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
ARRDC1-206ENST00000468983 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
ARRDC1-206ENST00000468983 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
ARRDC1-206ENST00000468983 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
ARRDC1-206ENST00000468983 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.12
ARRDC1-206ENST00000468983 CUX1P39880 1505 aa22.01■■□□□ 1.11
ARRDC1-206ENST00000468983 RAD54L2Q9Y4B4 1467 aa22.01■■□□□ 1.11
ARRDC1-206ENST00000468983 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.113e-10■■■■■ 45.4
ARRDC1-206ENST00000468983 SOGA1O94964 1423 aa21.97■■□□□ 1.11
ARRDC1-206ENST00000468983 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
ARRDC1-206ENST00000468983 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
ARRDC1-206ENST00000468983 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.11
ARRDC1-206ENST00000468983 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
ARRDC1-206ENST00000468983 FBLN2P98095 1184 aa21.78■■□□□ 1.08
ARRDC1-206ENST00000468983 WRNQ14191 1432 aaPredicted RBP eCLIP21.77■■□□□ 1.08
ARRDC1-206ENST00000468983 WDR97A6NE52 1622 aa21.77■■□□□ 1.07
ARRDC1-206ENST00000468983 CHD1O14646 1710 aa21.76■■□□□ 1.07
ARRDC1-206ENST00000468983 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
ARRDC1-206ENST00000468983 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
ARRDC1-206ENST00000468983 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
ARRDC1-206ENST00000468983 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
ARRDC1-206ENST00000468983 SNAPC4Q5SXM2 1469 aa21.72■■□□□ 1.07
ARRDC1-206ENST00000468983 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
ARRDC1-206ENST00000468983 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
ARRDC1-206ENST00000468983 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
ARRDC1-206ENST00000468983 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
ARRDC1-206ENST00000468983 PBRM1Q86U86 1689 aa21.65■■□□□ 1.06
ARRDC1-206ENST00000468983 ABCA5Q8WWZ7 1642 aa21.64■■□□□ 1.05
ARRDC1-206ENST00000468983 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.05
ARRDC1-206ENST00000468983 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
ARRDC1-206ENST00000468983 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
ARRDC1-206ENST00000468983 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
ARRDC1-206ENST00000468983 SYNJ2O15056 1496 aa21.58■■□□□ 1.04
ARRDC1-206ENST00000468983 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
ARRDC1-206ENST00000468983 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
ARRDC1-206ENST00000468983 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
ARRDC1-206ENST00000468983 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
ARRDC1-206ENST00000468983 ERICH3Q5RHP9 1530 aa21.43■■□□□ 1.02
ARRDC1-206ENST00000468983 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
ARRDC1-206ENST00000468983 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
ARRDC1-206ENST00000468983 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
ARRDC1-206ENST00000468983 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
ARRDC1-206ENST00000468983 NUP160Q12769 1436 aa21.34■■□□□ 1.01
ARRDC1-206ENST00000468983 IGF1RP08069 1367 aa21.33■■□□□ 1
ARRDC1-206ENST00000468983 KIF27Q86VH2 1401 aa21.32■■□□□ 1
ARRDC1-206ENST00000468983 ERCC6L2Q5T890 1561 aa21.26■□□□□ 0.99
ARRDC1-206ENST00000468983 JPH4Q96JJ6 628 aa21.2■□□□□ 0.98
ARRDC1-206ENST00000468983 SHROOM2Q13796 1616 aa21.19■□□□□ 0.98
ARRDC1-206ENST00000468983 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
ARRDC1-206ENST00000468983 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms