RNA–Protein interactions for RNA: ENST00000467409.5

ABCC13-203, Transcript of ATP binding cassette subfamily C member 13 (pseudogene), humanhuman

TSL 1 (best)

Gene ABCC13, Length 2,747 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC13-203ENST00000467409 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
ABCC13-203ENST00000467409 CCDC180Q9P1Z9 1646 aa22.09■■□□□ 1.13
ABCC13-203ENST00000467409 ZCCHC6Q5VYS8 1495 aaKnown RBP21.63■■□□□ 1.05
ABCC13-203ENST00000467409 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
ABCC13-203ENST00000467409 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
ABCC13-203ENST00000467409 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
ABCC13-203ENST00000467409 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
ABCC13-203ENST00000467409 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
ABCC13-203ENST00000467409 ABCC9O60706 1549 aa20.57■□□□□ 0.88
ABCC13-203ENST00000467409 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
ABCC13-203ENST00000467409 NACADO15069 1562 aa20.44■□□□□ 0.86
ABCC13-203ENST00000467409 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
ABCC13-203ENST00000467409 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
ABCC13-203ENST00000467409 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
ABCC13-203ENST00000467409 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
ABCC13-203ENST00000467409 RSF1Q96T23 1441 aaPredicted RBP20.07■□□□□ 0.8
ABCC13-203ENST00000467409 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
ABCC13-203ENST00000467409 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
ABCC13-203ENST00000467409 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
ABCC13-203ENST00000467409 HRCP23327 699 aa19.95■□□□□ 0.78
ABCC13-203ENST00000467409 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
ABCC13-203ENST00000467409 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
ABCC13-203ENST00000467409 WIZO95785 1651 aa19.77■□□□□ 0.75
ABCC13-203ENST00000467409 FAM9AQ8IZU1 332 aaPredicted RBP19.72■□□□□ 0.75
ABCC13-203ENST00000467409 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
ABCC13-203ENST00000467409 BICRAQ9NZM4 1560 aa19.68■□□□□ 0.74
ABCC13-203ENST00000467409 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
ABCC13-203ENST00000467409 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
ABCC13-203ENST00000467409 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
ABCC13-203ENST00000467409 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
ABCC13-203ENST00000467409 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
ABCC13-203ENST00000467409 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
ABCC13-203ENST00000467409 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
ABCC13-203ENST00000467409 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
ABCC13-203ENST00000467409 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
ABCC13-203ENST00000467409 TTBK1Q5TCY1 1321 aaPredicted RBP19.18■□□□□ 0.66
ABCC13-203ENST00000467409 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
ABCC13-203ENST00000467409 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
ABCC13-203ENST00000467409 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
ABCC13-203ENST00000467409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
ABCC13-203ENST00000467409 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
ABCC13-203ENST00000467409 NCAPD3P42695 1498 aa18.88■□□□□ 0.61
ABCC13-203ENST00000467409 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
ABCC13-203ENST00000467409 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
ABCC13-203ENST00000467409 SOGA1O94964 1423 aa18.83■□□□□ 0.6
ABCC13-203ENST00000467409 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
ABCC13-203ENST00000467409 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
ABCC13-203ENST00000467409 CCER1Q8TC90 406 aaPredicted RBP18.76■□□□□ 0.59
ABCC13-203ENST00000467409 EEA1Q15075 1411 aa18.71■□□□□ 0.59
ABCC13-203ENST00000467409 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
ABCC13-203ENST00000467409 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
ABCC13-203ENST00000467409 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
ABCC13-203ENST00000467409 BIVM-ERCC5R4GMW8 1640 aa18.65■□□□□ 0.58
ABCC13-203ENST00000467409 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
ABCC13-203ENST00000467409 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
ABCC13-203ENST00000467409 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
ABCC13-203ENST00000467409 CFTRP13569 1480 aa18.61■□□□□ 0.57
ABCC13-203ENST00000467409 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
ABCC13-203ENST00000467409 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
ABCC13-203ENST00000467409 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
ABCC13-203ENST00000467409 KIF21BO75037 1637 aa18.55■□□□□ 0.56
ABCC13-203ENST00000467409 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
ABCC13-203ENST00000467409 CUX1P39880 1505 aa18.55■□□□□ 0.56
ABCC13-203ENST00000467409 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
ABCC13-203ENST00000467409 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
ABCC13-203ENST00000467409 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
ABCC13-203ENST00000467409 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
ABCC13-203ENST00000467409 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
ABCC13-203ENST00000467409 DIEXFQ68CQ4 756 aaKnown RBP18.4■□□□□ 0.54
ABCC13-203ENST00000467409 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
ABCC13-203ENST00000467409 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
ABCC13-203ENST00000467409 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
ABCC13-203ENST00000467409 CLIP1P30622 1438 aa18.28■□□□□ 0.52
ABCC13-203ENST00000467409 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
ABCC13-203ENST00000467409 ACIN1Q9UKV3 1341 aaKnown RBP18.27■□□□□ 0.52
ABCC13-203ENST00000467409 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
ABCC13-203ENST00000467409 NESP48681 1621 aa18.25■□□□□ 0.51
ABCC13-203ENST00000467409 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
ABCC13-203ENST00000467409 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
ABCC13-203ENST00000467409 CUX2O14529 1486 aa18.18■□□□□ 0.5
ABCC13-203ENST00000467409 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
ABCC13-203ENST00000467409 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
ABCC13-203ENST00000467409 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
ABCC13-203ENST00000467409 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
ABCC13-203ENST00000467409 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
ABCC13-203ENST00000467409 ZNF316A6NFI3 1004 aaPredicted RBP18.13■□□□□ 0.49
ABCC13-203ENST00000467409 IGF1RP08069 1367 aa18.12■□□□□ 0.49
ABCC13-203ENST00000467409 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
ABCC13-203ENST00000467409 APLP2Q06481 763 aa18.1■□□□□ 0.49
ABCC13-203ENST00000467409 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
ABCC13-203ENST00000467409 MIER1Q8N108 512 aa18.09■□□□□ 0.49
ABCC13-203ENST00000467409 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
ABCC13-203ENST00000467409 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
ABCC13-203ENST00000467409 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
ABCC13-203ENST00000467409 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
ABCC13-203ENST00000467409 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
ABCC13-203ENST00000467409 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
ABCC13-203ENST00000467409 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
ABCC13-203ENST00000467409 ITGAEP38570 1179 aa18.02■□□□□ 0.48
ABCC13-203ENST00000467409 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms