RNA–Protein interactions for RNA: ENST00000467128.5

USP34-208, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-208ENST00000467128 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
USP34-208ENST00000467128 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
USP34-208ENST00000467128 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
USP34-208ENST00000467128 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
USP34-208ENST00000467128 FOXD1Q16676 465 aa21.91■■□□□ 1.1
USP34-208ENST00000467128 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
USP34-208ENST00000467128 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
USP34-208ENST00000467128 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
USP34-208ENST00000467128 MSH5O43196 834 aa20.4■□□□□ 0.86
USP34-208ENST00000467128 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
USP34-208ENST00000467128 ADRA2BP18089 450 aa20.34■□□□□ 0.85
USP34-208ENST00000467128 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
USP34-208ENST00000467128 MAPK8IP2Q13387 824 aaPredicted RBP18.75■□□□□ 0.59
USP34-208ENST00000467128 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
USP34-208ENST00000467128 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
USP34-208ENST00000467128 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
USP34-208ENST00000467128 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
USP34-208ENST00000467128 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
USP34-208ENST00000467128 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
USP34-208ENST00000467128 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
USP34-208ENST00000467128 ABCC9O60706 1549 aa17.64■□□□□ 0.41
USP34-208ENST00000467128 CACNB1Q02641 598 aaPredicted RBP17.62■□□□□ 0.41
USP34-208ENST00000467128 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
USP34-208ENST00000467128 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
USP34-208ENST00000467128 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
USP34-208ENST00000467128 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
USP34-208ENST00000467128 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
USP34-208ENST00000467128 NACADO15069 1562 aa17.14■□□□□ 0.33
USP34-208ENST00000467128 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
USP34-208ENST00000467128 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
USP34-208ENST00000467128 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
USP34-208ENST00000467128 ZCCHC6Q5VYS8 1495 aaKnown RBP17.08■□□□□ 0.32
USP34-208ENST00000467128 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
USP34-208ENST00000467128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
USP34-208ENST00000467128 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
USP34-208ENST00000467128 KCNA4P22459 653 aa16.75■□□□□ 0.27
USP34-208ENST00000467128 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
USP34-208ENST00000467128 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
USP34-208ENST00000467128 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
USP34-208ENST00000467128 BICRAQ9NZM4 1560 aa16.58■□□□□ 0.24
USP34-208ENST00000467128 SCRIBQ14160 1630 aa16.52■□□□□ 0.24
USP34-208ENST00000467128 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
USP34-208ENST00000467128 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
USP34-208ENST00000467128 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP34-208ENST00000467128 CAPN15O75808 1086 aa16.35■□□□□ 0.21
USP34-208ENST00000467128 DSG3P32926 999 aa16.35■□□□□ 0.21
USP34-208ENST00000467128 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
USP34-208ENST00000467128 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
USP34-208ENST00000467128 ABCB7O75027 752 aa16.05■□□□□ 0.16
USP34-208ENST00000467128 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
USP34-208ENST00000467128 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
USP34-208ENST00000467128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
USP34-208ENST00000467128 APLP2Q06481 763 aa15.93■□□□□ 0.14
USP34-208ENST00000467128 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
USP34-208ENST00000467128 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
USP34-208ENST00000467128 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
USP34-208ENST00000467128 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
USP34-208ENST00000467128 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
USP34-208ENST00000467128 POTEHQ6S545 545 aa15.82■□□□□ 0.12
USP34-208ENST00000467128 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
USP34-208ENST00000467128 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
USP34-208ENST00000467128 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
USP34-208ENST00000467128 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
USP34-208ENST00000467128 HMGXB3Q12766 1538 aa15.77■□□□□ 0.11
USP34-208ENST00000467128 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
USP34-208ENST00000467128 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
USP34-208ENST00000467128 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
USP34-208ENST00000467128 POLA2Q14181 598 aa15.63■□□□□ 0.09
USP34-208ENST00000467128 BAZ1BQ9UIG0 1483 aaKnown RBP15.63■□□□□ 0.09
USP34-208ENST00000467128 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
USP34-208ENST00000467128 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
USP34-208ENST00000467128 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
USP34-208ENST00000467128 WIZO95785 1651 aa15.54■□□□□ 0.08
USP34-208ENST00000467128 ZBTB22O15209 634 aa15.48■□□□□ 0.07
USP34-208ENST00000467128 TOP2AP11388 1531 aaKnown RBP15.45■□□□□ 0.06
USP34-208ENST00000467128 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
USP34-208ENST00000467128 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
USP34-208ENST00000467128 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
USP34-208ENST00000467128 NESP48681 1621 aa15.28■□□□□ 0.04
USP34-208ENST00000467128 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
USP34-208ENST00000467128 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
USP34-208ENST00000467128 CFTRP13569 1480 aa15.23■□□□□ 0.03
USP34-208ENST00000467128 PDS5BQ9NTI5 1447 aa15.23■□□□□ 0.03
USP34-208ENST00000467128 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
USP34-208ENST00000467128 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
USP34-208ENST00000467128 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
USP34-208ENST00000467128 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
USP34-208ENST00000467128 CUX2O14529 1486 aa15.19■□□□□ 0.02
USP34-208ENST00000467128 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
USP34-208ENST00000467128 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
USP34-208ENST00000467128 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
USP34-208ENST00000467128 CEP164Q9UPV0 1460 aa15.11■□□□□ 0.01
USP34-208ENST00000467128 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
USP34-208ENST00000467128 MRC2Q9UBG0 1479 aa15.08■□□□□ 0.01
USP34-208ENST00000467128 WDR62O43379 1518 aa15.07■□□□□ 0
USP34-208ENST00000467128 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
USP34-208ENST00000467128 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
USP34-208ENST00000467128 SUPT5HO00267 1087 aaKnown RBP14.97□□□□□ -0.01
USP34-208ENST00000467128 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
USP34-208ENST00000467128 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms