RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 IGF1RP08069 1367 aa44.56■■■■■ 4.72
ABCA2-213ENST00000466707 CUL7Q14999 1698 aa44.56■■■■■ 4.72
ABCA2-213ENST00000466707 KIAA0586Q9BVV6 1533 aa44.42■■■■■ 4.7
ABCA2-213ENST00000466707 KIF13AQ9H1H9 1805 aa44.38■■■■■ 4.7
ABCA2-213ENST00000466707 ADCY10Q96PN6 1610 aa44.28■■■■■ 4.68
ABCA2-213ENST00000466707 CARMIL1Q5VZK9 1371 aa44.26■■■■■ 4.68
ABCA2-213ENST00000466707 MAPKBP1O60336 1514 aa44.15■■■■■ 4.66
ABCA2-213ENST00000466707 ABCC10Q5T3U5 1492 aa44.08■■■■■ 4.65
ABCA2-213ENST00000466707 IQGAP2Q13576 1575 aa44.05■■■■■ 4.64
ABCA2-213ENST00000466707 DIP2BQ9P265 1576 aa44.05■■■■■ 4.64
ABCA2-213ENST00000466707 NPM1P06748 294 aaKnown RBP eCLIP44.04■■■■■ 4.64
ABCA2-213ENST00000466707 FAM69CQ0P6D2 419 aa43.98■■■■■ 4.63
ABCA2-213ENST00000466707 PTPRGP23470 1445 aa43.96■■■■■ 4.63
ABCA2-213ENST00000466707 CARMIL2Q6F5E8 1435 aa43.92■■■■■ 4.62
ABCA2-213ENST00000466707 TNIKQ9UKE5 1360 aa43.9■■■■■ 4.62
ABCA2-213ENST00000466707 TTBK1Q5TCY1 1321 aaPredicted RBP43.89■■■■■ 4.62
ABCA2-213ENST00000466707 RAPGEF2Q9Y4G8 1499 aa43.89■■■■■ 4.62
ABCA2-213ENST00000466707 DISP1Q96F81 1524 aa43.85■■■■■ 4.61
ABCA2-213ENST00000466707 AEBP2Q6ZN18 517 aaPredicted RBP43.82■■■■■ 4.61
ABCA2-213ENST00000466707 ABCC2Q92887 1545 aa43.78■■■■■ 4.6
ABCA2-213ENST00000466707 UGGT2Q9NYU1 1516 aa43.77■■■■■ 4.6
ABCA2-213ENST00000466707 TSPOAP1O95153 1857 aa43.76■■■■■ 4.6
ABCA2-213ENST00000466707 UHRF1BP1LA0JNW5 1464 aa43.7■■■■■ 4.59
ABCA2-213ENST00000466707 KIAA0556O60303 1618 aa43.69■■■■■ 4.58
ABCA2-213ENST00000466707 CTTNBP2Q8WZ74 1663 aa43.65■■■■■ 4.58
ABCA2-213ENST00000466707 UACAQ9BZF9 1416 aa43.65■■■■■ 4.58
ABCA2-213ENST00000466707 KDM6BO15054 1643 aa43.63■■■■■ 4.58
ABCA2-213ENST00000466707 ASXL2Q76L83 1435 aa43.63■■■■■ 4.57
ABCA2-213ENST00000466707 PLB1Q6P1J6 1458 aa43.56■■■■■ 4.56
ABCA2-213ENST00000466707 GLI2P10070 1586 aa43.52■■■■■ 4.56
ABCA2-213ENST00000466707 PPRC1Q5VV67 1664 aaKnown RBP43.52■■■■■ 4.56
ABCA2-213ENST00000466707 KDM5BQ9UGL1 1544 aa43.52■■■■■ 4.56
ABCA2-213ENST00000466707 ZCCHC11Q5TAX3 1644 aaKnown RBP43.5■■■■■ 4.55
ABCA2-213ENST00000466707 PRXQ9BXM0 1461 aa43.48■■■■■ 4.55
ABCA2-213ENST00000466707 EPRSP07814 1512 aaKnown RBP43.38■■■■■ 4.53
ABCA2-213ENST00000466707 MAP3K4Q9Y6R4 1608 aa43.33■■■■■ 4.53
ABCA2-213ENST00000466707 GOLGA3Q08378 1498 aa43.33■■■■■ 4.53
ABCA2-213ENST00000466707 ABCA8O94911 1581 aa43.27■■■■■ 4.52
ABCA2-213ENST00000466707 WDR7Q9Y4E6 1490 aa43.21■■■■■ 4.51
ABCA2-213ENST00000466707 COL17A1Q9UMD9 1497 aaPredicted RBP43.14■■■■■ 4.5
ABCA2-213ENST00000466707 KDM4FA0A1W2PPD8 638 aa43.12■■■■■ 4.49
ABCA2-213ENST00000466707 TEX14Q8IWB6 1497 aa43.09■■■■■ 4.49
ABCA2-213ENST00000466707 CSRNP3Q8WYN3 585 aa43.05■■■■■ 4.48
ABCA2-213ENST00000466707 SAMD9Q5K651 1589 aa43.01■■■■■ 4.48
ABCA2-213ENST00000466707 CFAP43Q8NDM7 1665 aa43■■■■■ 4.47
ABCA2-213ENST00000466707 P3H3Q8IVL6 736 aa42.98■■■■■ 4.47
ABCA2-213ENST00000466707 KCNH8Q96L42 1107 aa42.91■■■■■ 4.46
ABCA2-213ENST00000466707 CD109Q6YHK3 1445 aa42.9■■■■■ 4.46
ABCA2-213ENST00000466707 MAGI3Q5TCQ9 1506 aa42.9■■■■■ 4.46
ABCA2-213ENST00000466707 EEA1Q15075 1411 aa42.89■■■■■ 4.46
ABCA2-213ENST00000466707 ATP10BO94823 1461 aa42.87■■■■■ 4.45
ABCA2-213ENST00000466707 ARID3CA6NKF2 412 aa42.86■■■■■ 4.45
ABCA2-213ENST00000466707 ADGRL1O94910 1474 aa42.84■■■■■ 4.45
ABCA2-213ENST00000466707 RAPGEF6Q8TEU7 1601 aa42.82■■■■■ 4.44
ABCA2-213ENST00000466707 FAM9AQ8IZU1 332 aaPredicted RBP42.73■■■■■ 4.43
ABCA2-213ENST00000466707 ABCA9Q8IUA7 1624 aa42.68■■■■■ 4.42
ABCA2-213ENST00000466707 FHOD3Q2V2M9 1422 aa42.68■■■■■ 4.42
ABCA2-213ENST00000466707 KIF21BO75037 1637 aa42.68■■■■■ 4.42
ABCA2-213ENST00000466707 RANGAP1P46060 587 aaPredicted RBP42.67■■■■■ 4.42
ABCA2-213ENST00000466707 NUP153P49790 1475 aaKnown RBP42.65■■■■■ 4.42
ABCA2-213ENST00000466707 ARAP3Q8WWN8 1544 aa42.56■■■■■ 4.4
ABCA2-213ENST00000466707 EFCAB5A4FU69 1503 aa42.51■■■■■ 4.4
ABCA2-213ENST00000466707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.48■■■■■ 4.39
ABCA2-213ENST00000466707 HNRNPUL2Q1KMD3 747 aaKnown RBP42.48■■■■■ 4.39
ABCA2-213ENST00000466707 NEO1Q92859 1461 aa42.38■■■■■ 4.38
ABCA2-213ENST00000466707 PHLDB1Q86UU1 1377 aa42.37■■■■■ 4.37
ABCA2-213ENST00000466707 FRMPD1Q5SYB0 1578 aa42.35■■■■■ 4.37
ABCA2-213ENST00000466707 CHIC1Q5VXU3 224 aa42.33■■■■■ 4.37
ABCA2-213ENST00000466707 EHMT2Q96KQ7 1210 aa42.32■■■■■ 4.37
ABCA2-213ENST00000466707 RAPGEF3O95398 923 aa42.29■■■■■ 4.36
ABCA2-213ENST00000466707 CDK13Q14004 1512 aaKnown RBP42.27■■■■■ 4.36
ABCA2-213ENST00000466707 HECW2Q9P2P5 1572 aa42.27■■■■■ 4.36
ABCA2-213ENST00000466707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.25■■■■■ 4.35
ABCA2-213ENST00000466707 PLEKHD1A6NEE1 506 aa42.25■■■■■ 4.35
ABCA2-213ENST00000466707 TTC37Q6PGP7 1564 aa42.25■■■■■ 4.35
ABCA2-213ENST00000466707 UBTFP17480 764 aaKnown RBP42.2■■■■■ 4.35
ABCA2-213ENST00000466707 ARHGAP35Q9NRY4 1499 aa42.18■■■■■ 4.34
ABCA2-213ENST00000466707 RICTORQ6R327 1708 aa42.16■■■■■ 4.34
ABCA2-213ENST00000466707 CFAP74Q9C0B2 1584 aa42.14■■■■■ 4.34
ABCA2-213ENST00000466707 ADAMTSL3P82987 1691 aa42.12■■■■■ 4.33
ABCA2-213ENST00000466707 FANCAO15360 1455 aa42.12■■■■■ 4.33
ABCA2-213ENST00000466707 HECW1Q76N89 1606 aa42.11■■■■■ 4.33
ABCA2-213ENST00000466707 AKNAQ7Z591 1439 aa42.11■■■■■ 4.33
ABCA2-213ENST00000466707 FMN1Q68DA7 1419 aa42.08■■■■■ 4.33
ABCA2-213ENST00000466707 DENND4BO75064 1496 aaPredicted RBP42.08■■■■■ 4.33
ABCA2-213ENST00000466707 ARHGEF40Q8TER5 1519 aa42.08■■■■■ 4.33
ABCA2-213ENST00000466707 BCORL1Q5H9F3 1711 aa42.04■■■■■ 4.32
ABCA2-213ENST00000466707 LRRIQ1Q96JM4 1722 aa41.98■■■■■ 4.31
ABCA2-213ENST00000466707 ATP1B4Q9UN42 357 aaPredicted RBP41.97■■■■■ 4.31
ABCA2-213ENST00000466707 PTPRMP28827 1452 aa41.97■■■■■ 4.31
ABCA2-213ENST00000466707 ZMYM4Q5VZL5 1548 aa41.96■■■■■ 4.31
ABCA2-213ENST00000466707 MADDQ8WXG6 1647 aa41.95■■■■■ 4.31
ABCA2-213ENST00000466707 KIF14Q15058 1648 aa41.92■■■■■ 4.3
ABCA2-213ENST00000466707 PLCH2O75038 1416 aa41.92■■■■■ 4.3
ABCA2-213ENST00000466707 MYO5CQ9NQX4 1742 aa41.91■■■■■ 4.3
ABCA2-213ENST00000466707 ARID4BQ4LE39 1312 aaPredicted RBP41.89■■■■■ 4.3
ABCA2-213ENST00000466707 SIGLEC1Q9BZZ2 1709 aa41.89■■■■■ 4.3
ABCA2-213ENST00000466707 YEATS2Q9ULM3 1422 aa41.86■■■■■ 4.29
ABCA2-213ENST00000466707 ZFYVE16Q7Z3T8 1539 aa41.85■■■■■ 4.29
ABCA2-213ENST00000466707 POGZQ7Z3K3 1410 aa41.82■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms