RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 NISCHQ9Y2I1 1504 aa37.48■■■■□ 3.59
NUP58-208ENST00000466694 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
NUP58-208ENST00000466694 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
NUP58-208ENST00000466694 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
NUP58-208ENST00000466694 ABCC9O60706 1549 aa30.81■■■□□ 2.52
NUP58-208ENST00000466694 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
NUP58-208ENST00000466694 SHROOM4Q9ULL8 1493 aa30.67■■■□□ 2.5
NUP58-208ENST00000466694 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
NUP58-208ENST00000466694 NACADO15069 1562 aa30.42■■■□□ 2.46
NUP58-208ENST00000466694 RB1CC1Q8TDY2 1594 aa30.14■■■□□ 2.42
NUP58-208ENST00000466694 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
NUP58-208ENST00000466694 SUPT5HO00267 1087 aaKnown RBP29.78■■■□□ 2.36
NUP58-208ENST00000466694 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
NUP58-208ENST00000466694 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
NUP58-208ENST00000466694 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
NUP58-208ENST00000466694 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
NUP58-208ENST00000466694 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
NUP58-208ENST00000466694 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
NUP58-208ENST00000466694 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
NUP58-208ENST00000466694 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
NUP58-208ENST00000466694 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
NUP58-208ENST00000466694 WIZO95785 1651 aa28.74■■■□□ 2.19
NUP58-208ENST00000466694 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.15
NUP58-208ENST00000466694 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
NUP58-208ENST00000466694 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
NUP58-208ENST00000466694 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
NUP58-208ENST00000466694 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
NUP58-208ENST00000466694 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
NUP58-208ENST00000466694 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
NUP58-208ENST00000466694 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
NUP58-208ENST00000466694 NCAPD3P42695 1498 aa28.07■■■□□ 2.08
NUP58-208ENST00000466694 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
NUP58-208ENST00000466694 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
NUP58-208ENST00000466694 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
NUP58-208ENST00000466694 ABCC8Q09428 1581 aa27.55■■■□□ 2
NUP58-208ENST00000466694 FAM9AQ8IZU1 332 aaPredicted RBP27.47■■□□□ 1.99
NUP58-208ENST00000466694 CFTRP13569 1480 aa27.46■■□□□ 1.99
NUP58-208ENST00000466694 PRDM2Q13029 1718 aa27.42■■□□□ 1.98
NUP58-208ENST00000466694 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
NUP58-208ENST00000466694 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
NUP58-208ENST00000466694 SYNJ1O43426 1573 aa27.28■■□□□ 1.96
NUP58-208ENST00000466694 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
NUP58-208ENST00000466694 TOP2BQ02880 1626 aa27.17■■□□□ 1.94
NUP58-208ENST00000466694 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
NUP58-208ENST00000466694 EEA1Q15075 1411 aa27.17■■□□□ 1.94
NUP58-208ENST00000466694 LAMC3Q9Y6N6 1575 aa27.13■■□□□ 1.93
NUP58-208ENST00000466694 SOGA1O94964 1423 aa27.12■■□□□ 1.93
NUP58-208ENST00000466694 NESP48681 1621 aa27.09■■□□□ 1.93
NUP58-208ENST00000466694 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
NUP58-208ENST00000466694 CUX1P39880 1505 aa27.07■■□□□ 1.92
NUP58-208ENST00000466694 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
NUP58-208ENST00000466694 FANCD2Q9BXW9 1451 aa27.03■■□□□ 1.92
NUP58-208ENST00000466694 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
NUP58-208ENST00000466694 CSRNP3Q8WYN3 585 aa26.96■■□□□ 1.91
NUP58-208ENST00000466694 TRIM26Q12899 539 aaPredicted RBP26.93■■□□□ 1.9
NUP58-208ENST00000466694 TNIKQ9UKE5 1360 aa26.85■■□□□ 1.89
NUP58-208ENST00000466694 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
NUP58-208ENST00000466694 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
NUP58-208ENST00000466694 KIF21AQ7Z4S6 1674 aa26.83■■□□□ 1.89
NUP58-208ENST00000466694 GOLGA3Q08378 1498 aa26.83■■□□□ 1.89
NUP58-208ENST00000466694 DNMBPQ6XZF7 1577 aa26.82■■□□□ 1.88
NUP58-208ENST00000466694 KIF21BO75037 1637 aa26.81■■□□□ 1.88
NUP58-208ENST00000466694 HRCP23327 699 aa26.78■■□□□ 1.88
NUP58-208ENST00000466694 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
NUP58-208ENST00000466694 CEP162Q5TB80 1403 aa26.76■■□□□ 1.87
NUP58-208ENST00000466694 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
NUP58-208ENST00000466694 URB2Q14146 1524 aaKnown RBP26.72■■□□□ 1.87
NUP58-208ENST00000466694 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
NUP58-208ENST00000466694 POLA1P09884 1462 aaPredicted RBP26.64■■□□□ 1.85
NUP58-208ENST00000466694 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
NUP58-208ENST00000466694 CUX2O14529 1486 aa26.55■■□□□ 1.84
NUP58-208ENST00000466694 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
NUP58-208ENST00000466694 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
NUP58-208ENST00000466694 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
NUP58-208ENST00000466694 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
NUP58-208ENST00000466694 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
NUP58-208ENST00000466694 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
NUP58-208ENST00000466694 PRXQ9BXM0 1461 aa26.5■■□□□ 1.83
NUP58-208ENST00000466694 WDR62O43379 1518 aa26.44■■□□□ 1.82
NUP58-208ENST00000466694 CLIP1P30622 1438 aa26.42■■□□□ 1.82
NUP58-208ENST00000466694 TARBP1Q13395 1621 aaKnown RBP26.4■■□□□ 1.82
NUP58-208ENST00000466694 PPARGC1BQ86YN6 1023 aaKnown RBP26.4■■□□□ 1.82
NUP58-208ENST00000466694 IGF1RP08069 1367 aa26.39■■□□□ 1.82
NUP58-208ENST00000466694 ERCC6Q03468 1493 aa26.39■■□□□ 1.81
NUP58-208ENST00000466694 THOC2Q8NI27 1593 aaKnown RBP26.38■■□□□ 1.81
NUP58-208ENST00000466694 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
NUP58-208ENST00000466694 VPS8Q8N3P4 1428 aa26.27■■□□□ 1.8
NUP58-208ENST00000466694 CUL7Q14999 1698 aa26.26■■□□□ 1.79
NUP58-208ENST00000466694 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
NUP58-208ENST00000466694 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
NUP58-208ENST00000466694 TDRD9Q8NDG6 1382 aaKnown RBP26.22■■□□□ 1.79
NUP58-208ENST00000466694 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
NUP58-208ENST00000466694 PBRM1Q86U86 1689 aa26.16■■□□□ 1.78
NUP58-208ENST00000466694 ZEB1P37275 1124 aaPredicted RBP26.15■■□□□ 1.78
NUP58-208ENST00000466694 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
NUP58-208ENST00000466694 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.773e-7■■■□□ 19.2
NUP58-208ENST00000466694 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.77
NUP58-208ENST00000466694 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.77
NUP58-208ENST00000466694 TTBK1Q5TCY1 1321 aaPredicted RBP26.07■■□□□ 1.76
NUP58-208ENST00000466694 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms