RNA–Protein interactions for RNA: ENST00000466307.1

TMEM140-202, Transcript of transmembrane protein 140, humanhuman

TSL 5

Gene TMEM140, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM140-202ENST00000466307 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
TMEM140-202ENST00000466307 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
TMEM140-202ENST00000466307 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
TMEM140-202ENST00000466307 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
TMEM140-202ENST00000466307 FOXD1Q16676 465 aa20.74■□□□□ 0.91
TMEM140-202ENST00000466307 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
TMEM140-202ENST00000466307 NISCHQ9Y2I1 1504 aa19.87■□□□□ 0.77
TMEM140-202ENST00000466307 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
TMEM140-202ENST00000466307 ADRA2BP18089 450 aa19.81■□□□□ 0.76
TMEM140-202ENST00000466307 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
TMEM140-202ENST00000466307 PIAS4Q8N2W9 510 aaPredicted RBP19.55■□□□□ 0.72
TMEM140-202ENST00000466307 MSH5O43196 834 aa19.2■□□□□ 0.66
TMEM140-202ENST00000466307 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
TMEM140-202ENST00000466307 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
TMEM140-202ENST00000466307 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
TMEM140-202ENST00000466307 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
TMEM140-202ENST00000466307 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
TMEM140-202ENST00000466307 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
TMEM140-202ENST00000466307 KCNA4P22459 653 aa17.53■□□□□ 0.4
TMEM140-202ENST00000466307 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
TMEM140-202ENST00000466307 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
TMEM140-202ENST00000466307 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
TMEM140-202ENST00000466307 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
TMEM140-202ENST00000466307 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
TMEM140-202ENST00000466307 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
TMEM140-202ENST00000466307 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
TMEM140-202ENST00000466307 ZCCHC6Q5VYS8 1495 aaKnown RBP16.66■□□□□ 0.26
TMEM140-202ENST00000466307 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
TMEM140-202ENST00000466307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
TMEM140-202ENST00000466307 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
TMEM140-202ENST00000466307 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
TMEM140-202ENST00000466307 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
TMEM140-202ENST00000466307 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
TMEM140-202ENST00000466307 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
TMEM140-202ENST00000466307 ABCC9O60706 1549 aa16.34■□□□□ 0.21
TMEM140-202ENST00000466307 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
TMEM140-202ENST00000466307 NACADO15069 1562 aa16.24■□□□□ 0.19
TMEM140-202ENST00000466307 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
TMEM140-202ENST00000466307 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
TMEM140-202ENST00000466307 ZBTB22O15209 634 aa16.13■□□□□ 0.17
TMEM140-202ENST00000466307 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
TMEM140-202ENST00000466307 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
TMEM140-202ENST00000466307 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
TMEM140-202ENST00000466307 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
TMEM140-202ENST00000466307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
TMEM140-202ENST00000466307 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
TMEM140-202ENST00000466307 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
TMEM140-202ENST00000466307 APLP2Q06481 763 aa15.87■□□□□ 0.13
TMEM140-202ENST00000466307 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
TMEM140-202ENST00000466307 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
TMEM140-202ENST00000466307 CAPN15O75808 1086 aa15.84■□□□□ 0.13
TMEM140-202ENST00000466307 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
TMEM140-202ENST00000466307 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
TMEM140-202ENST00000466307 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
TMEM140-202ENST00000466307 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
TMEM140-202ENST00000466307 SUPT5HO00267 1087 aaKnown RBP15.62■□□□□ 0.09
TMEM140-202ENST00000466307 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
TMEM140-202ENST00000466307 DSG3P32926 999 aa15.57■□□□□ 0.08
TMEM140-202ENST00000466307 ABCB7O75027 752 aa15.53■□□□□ 0.08
TMEM140-202ENST00000466307 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
TMEM140-202ENST00000466307 POLA2Q14181 598 aa15.41■□□□□ 0.06
TMEM140-202ENST00000466307 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
TMEM140-202ENST00000466307 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
TMEM140-202ENST00000466307 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
TMEM140-202ENST00000466307 BICRAQ9NZM4 1560 aa15.37■□□□□ 0.05
TMEM140-202ENST00000466307 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
TMEM140-202ENST00000466307 POTEHQ6S545 545 aa15.27■□□□□ 0.04
TMEM140-202ENST00000466307 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
TMEM140-202ENST00000466307 SMARCA4P51532 1647 aa15.21■□□□□ 0.02
TMEM140-202ENST00000466307 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
TMEM140-202ENST00000466307 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
TMEM140-202ENST00000466307 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
TMEM140-202ENST00000466307 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
TMEM140-202ENST00000466307 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
TMEM140-202ENST00000466307 WIZO95785 1651 aa15.06■□□□□ 0
TMEM140-202ENST00000466307 ATAD2BQ9ULI0 1458 aa15.05■□□□□ -0
TMEM140-202ENST00000466307 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
TMEM140-202ENST00000466307 FBLN2P98095 1184 aa15.01□□□□□ -0.01
TMEM140-202ENST00000466307 NCAPD3P42695 1498 aa15□□□□□ -0.01
TMEM140-202ENST00000466307 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
TMEM140-202ENST00000466307 MKRN4PQ13434 485 aaPredicted RBP14.94□□□□□ -0.02
TMEM140-202ENST00000466307 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
TMEM140-202ENST00000466307 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
TMEM140-202ENST00000466307 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
TMEM140-202ENST00000466307 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
TMEM140-202ENST00000466307 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
TMEM140-202ENST00000466307 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
TMEM140-202ENST00000466307 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
TMEM140-202ENST00000466307 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
TMEM140-202ENST00000466307 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
TMEM140-202ENST00000466307 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
TMEM140-202ENST00000466307 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
TMEM140-202ENST00000466307 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
TMEM140-202ENST00000466307 CFTRP13569 1480 aa14.62□□□□□ -0.07
TMEM140-202ENST00000466307 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
TMEM140-202ENST00000466307 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
TMEM140-202ENST00000466307 SPDYE4A6NLX3 237 aa14.54□□□□□ -0.08
TMEM140-202ENST00000466307 EEA1Q15075 1411 aa14.51□□□□□ -0.09
TMEM140-202ENST00000466307 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
TMEM140-202ENST00000466307 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1592 ms