RNA–Protein interactions for RNA: ENST00000465826.5

RAF1-207, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 3

Gene RAF1, Length 1,518 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-207ENST00000465826 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
RAF1-207ENST00000465826 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
RAF1-207ENST00000465826 ABCC9O60706 1549 aa21.73■■□□□ 1.07
RAF1-207ENST00000465826 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
RAF1-207ENST00000465826 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
RAF1-207ENST00000465826 NACADO15069 1562 aa20.94■□□□□ 0.94
RAF1-207ENST00000465826 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
RAF1-207ENST00000465826 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
RAF1-207ENST00000465826 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
RAF1-207ENST00000465826 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
RAF1-207ENST00000465826 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
RAF1-207ENST00000465826 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
RAF1-207ENST00000465826 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
RAF1-207ENST00000465826 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
RAF1-207ENST00000465826 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
RAF1-207ENST00000465826 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
RAF1-207ENST00000465826 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
RAF1-207ENST00000465826 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
RAF1-207ENST00000465826 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
RAF1-207ENST00000465826 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
RAF1-207ENST00000465826 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
RAF1-207ENST00000465826 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
RAF1-207ENST00000465826 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
RAF1-207ENST00000465826 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
RAF1-207ENST00000465826 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
RAF1-207ENST00000465826 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
RAF1-207ENST00000465826 WIZO95785 1651 aa19.25■□□□□ 0.67
RAF1-207ENST00000465826 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
RAF1-207ENST00000465826 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
RAF1-207ENST00000465826 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.64
RAF1-207ENST00000465826 TOP2AP11388 1531 aaKnown RBP19.01■□□□□ 0.63
RAF1-207ENST00000465826 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.61
RAF1-207ENST00000465826 NESP48681 1621 aa18.83■□□□□ 0.61
RAF1-207ENST00000465826 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
RAF1-207ENST00000465826 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
RAF1-207ENST00000465826 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
RAF1-207ENST00000465826 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
RAF1-207ENST00000465826 CFTRP13569 1480 aa18.69■□□□□ 0.58
RAF1-207ENST00000465826 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
RAF1-207ENST00000465826 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.57
RAF1-207ENST00000465826 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
RAF1-207ENST00000465826 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
RAF1-207ENST00000465826 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
RAF1-207ENST00000465826 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
RAF1-207ENST00000465826 CUX2O14529 1486 aa18.39■□□□□ 0.53
RAF1-207ENST00000465826 URB2Q14146 1524 aaKnown RBP18.36■□□□□ 0.53
RAF1-207ENST00000465826 WDR62O43379 1518 aa18.35■□□□□ 0.53
RAF1-207ENST00000465826 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
RAF1-207ENST00000465826 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
RAF1-207ENST00000465826 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.51
RAF1-207ENST00000465826 CUX1P39880 1505 aa18.21■□□□□ 0.51
RAF1-207ENST00000465826 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
RAF1-207ENST00000465826 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
RAF1-207ENST00000465826 IFT140Q96RY7 1462 aa18.14■□□□□ 0.49
RAF1-207ENST00000465826 SOGA1O94964 1423 aa18.13■□□□□ 0.49
RAF1-207ENST00000465826 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
RAF1-207ENST00000465826 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
RAF1-207ENST00000465826 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
RAF1-207ENST00000465826 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
RAF1-207ENST00000465826 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
RAF1-207ENST00000465826 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
RAF1-207ENST00000465826 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
RAF1-207ENST00000465826 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
RAF1-207ENST00000465826 AQRO60306 1485 aaKnown RBP eCLIP18■□□□□ 0.471e-8■■■■■ 31.5
RAF1-207ENST00000465826 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
RAF1-207ENST00000465826 ABCA10Q8WWZ4 1543 aa17.94■□□□□ 0.46
RAF1-207ENST00000465826 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
RAF1-207ENST00000465826 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
RAF1-207ENST00000465826 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.46
RAF1-207ENST00000465826 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
RAF1-207ENST00000465826 GRIN2BQ13224 1484 aa17.86■□□□□ 0.45
RAF1-207ENST00000465826 FBLN2P98095 1184 aa17.84■□□□□ 0.45
RAF1-207ENST00000465826 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.44
RAF1-207ENST00000465826 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
RAF1-207ENST00000465826 PBRM1Q86U86 1689 aa17.81■□□□□ 0.44
RAF1-207ENST00000465826 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
RAF1-207ENST00000465826 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
RAF1-207ENST00000465826 CHMP7Q8WUX9 453 aaPredicted RBP17.79■□□□□ 0.44
RAF1-207ENST00000465826 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.44
RAF1-207ENST00000465826 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
RAF1-207ENST00000465826 CHD1O14646 1710 aa17.72■□□□□ 0.43
RAF1-207ENST00000465826 IGF1RP08069 1367 aa17.72■□□□□ 0.43
RAF1-207ENST00000465826 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
RAF1-207ENST00000465826 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
RAF1-207ENST00000465826 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
RAF1-207ENST00000465826 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
RAF1-207ENST00000465826 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
RAF1-207ENST00000465826 ADAMTS12P58397 1594 aa17.65■□□□□ 0.42
RAF1-207ENST00000465826 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.41
RAF1-207ENST00000465826 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
RAF1-207ENST00000465826 CUL7Q14999 1698 aa17.62■□□□□ 0.41
RAF1-207ENST00000465826 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
RAF1-207ENST00000465826 EEA1Q15075 1411 aa17.57■□□□□ 0.4
RAF1-207ENST00000465826 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
RAF1-207ENST00000465826 NUP160Q12769 1436 aa17.5■□□□□ 0.39
RAF1-207ENST00000465826 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
RAF1-207ENST00000465826 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
RAF1-207ENST00000465826 PRXQ9BXM0 1461 aa17.47■□□□□ 0.39
RAF1-207ENST00000465826 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
RAF1-207ENST00000465826 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms