RNA–Protein interactions for RNA: ENST00000465386.1

USP9X-205, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-205ENST00000465386 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
USP9X-205ENST00000465386 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
USP9X-205ENST00000465386 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
USP9X-205ENST00000465386 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
USP9X-205ENST00000465386 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
USP9X-205ENST00000465386 FOXD1Q16676 465 aa19.52■□□□□ 0.72
USP9X-205ENST00000465386 MSH5O43196 834 aa18.66■□□□□ 0.58
USP9X-205ENST00000465386 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
USP9X-205ENST00000465386 PPP6R1Q9UPN7 881 aa17.48■□□□□ 0.39
USP9X-205ENST00000465386 ADRA2BP18089 450 aa17.32■□□□□ 0.36
USP9X-205ENST00000465386 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
USP9X-205ENST00000465386 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
USP9X-205ENST00000465386 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
USP9X-205ENST00000465386 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
USP9X-205ENST00000465386 RNF39Q9H2S5 420 aa15.85■□□□□ 0.13
USP9X-205ENST00000465386 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
USP9X-205ENST00000465386 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
USP9X-205ENST00000465386 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
USP9X-205ENST00000465386 POTEHQ6S545 545 aa15.44■□□□□ 0.06
USP9X-205ENST00000465386 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
USP9X-205ENST00000465386 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
USP9X-205ENST00000465386 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
USP9X-205ENST00000465386 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
USP9X-205ENST00000465386 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
USP9X-205ENST00000465386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
USP9X-205ENST00000465386 DSG3P32926 999 aa14.49□□□□□ -0.09
USP9X-205ENST00000465386 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
USP9X-205ENST00000465386 CAPN15O75808 1086 aa14.26□□□□□ -0.13
USP9X-205ENST00000465386 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
USP9X-205ENST00000465386 KCNA4P22459 653 aa14.1□□□□□ -0.15
USP9X-205ENST00000465386 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
USP9X-205ENST00000465386 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
USP9X-205ENST00000465386 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
USP9X-205ENST00000465386 ABCB7O75027 752 aa13.84□□□□□ -0.19
USP9X-205ENST00000465386 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
USP9X-205ENST00000465386 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
USP9X-205ENST00000465386 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
USP9X-205ENST00000465386 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
USP9X-205ENST00000465386 APLP2Q06481 763 aa13.65□□□□□ -0.22
USP9X-205ENST00000465386 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
USP9X-205ENST00000465386 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
USP9X-205ENST00000465386 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
USP9X-205ENST00000465386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
USP9X-205ENST00000465386 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
USP9X-205ENST00000465386 HAX1O00165 279 aa13.39□□□□□ -0.27
USP9X-205ENST00000465386 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
USP9X-205ENST00000465386 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
USP9X-205ENST00000465386 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
USP9X-205ENST00000465386 POLA2Q14181 598 aa13.21□□□□□ -0.29
USP9X-205ENST00000465386 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
USP9X-205ENST00000465386 EVX2Q03828 476 aa13.19□□□□□ -0.3
USP9X-205ENST00000465386 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
USP9X-205ENST00000465386 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.31e-7■■■■■ 28.3
USP9X-205ENST00000465386 LHX8Q68G74 356 aa13.1□□□□□ -0.31
USP9X-205ENST00000465386 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
USP9X-205ENST00000465386 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
USP9X-205ENST00000465386 ZBTB22O15209 634 aa13.01□□□□□ -0.33
USP9X-205ENST00000465386 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
USP9X-205ENST00000465386 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
USP9X-205ENST00000465386 GABBR2O75899 941 aa12.83□□□□□ -0.36
USP9X-205ENST00000465386 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
USP9X-205ENST00000465386 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
USP9X-205ENST00000465386 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
USP9X-205ENST00000465386 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
USP9X-205ENST00000465386 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
USP9X-205ENST00000465386 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
USP9X-205ENST00000465386 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
USP9X-205ENST00000465386 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
USP9X-205ENST00000465386 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
USP9X-205ENST00000465386 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
USP9X-205ENST00000465386 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
USP9X-205ENST00000465386 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
USP9X-205ENST00000465386 POTEMA6NI47 508 aa12.38□□□□□ -0.43
USP9X-205ENST00000465386 NISCHQ9Y2I1 1504 aa12.34□□□□□ -0.43
USP9X-205ENST00000465386 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
USP9X-205ENST00000465386 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
USP9X-205ENST00000465386 CLCN6P51797 869 aa12.3□□□□□ -0.44
USP9X-205ENST00000465386 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
USP9X-205ENST00000465386 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.45
USP9X-205ENST00000465386 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
USP9X-205ENST00000465386 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.45
USP9X-205ENST00000465386 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
USP9X-205ENST00000465386 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
USP9X-205ENST00000465386 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
USP9X-205ENST00000465386 FBLN2P98095 1184 aa12.09□□□□□ -0.47
USP9X-205ENST00000465386 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
USP9X-205ENST00000465386 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
USP9X-205ENST00000465386 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
USP9X-205ENST00000465386 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
USP9X-205ENST00000465386 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
USP9X-205ENST00000465386 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
USP9X-205ENST00000465386 FKBP8Q14318 412 aa11.88□□□□□ -0.51
USP9X-205ENST00000465386 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
USP9X-205ENST00000465386 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP9X-205ENST00000465386 POTEJP0CG39 1038 aa11.8□□□□□ -0.52
USP9X-205ENST00000465386 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
USP9X-205ENST00000465386 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
USP9X-205ENST00000465386 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
USP9X-205ENST00000465386 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
USP9X-205ENST00000465386 C7P10643 843 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms