RNA–Protein interactions for RNA: ENST00000464951.1

PPM1J-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1J, humanhuman

TSL 1 (best) BASIC

Gene PPM1J, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1J-202ENST00000464951 NISCHQ9Y2I1 1504 aa34.03■■■■□ 3.04
PPM1J-202ENST00000464951 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.31
PPM1J-202ENST00000464951 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
PPM1J-202ENST00000464951 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
PPM1J-202ENST00000464951 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
PPM1J-202ENST00000464951 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
PPM1J-202ENST00000464951 ABCC9O60706 1549 aa28.02■■■□□ 2.08
PPM1J-202ENST00000464951 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
PPM1J-202ENST00000464951 NACADO15069 1562 aa27.42■■□□□ 1.98
PPM1J-202ENST00000464951 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
PPM1J-202ENST00000464951 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
PPM1J-202ENST00000464951 RB1CC1Q8TDY2 1594 aa27.15■■□□□ 1.94
PPM1J-202ENST00000464951 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
PPM1J-202ENST00000464951 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
PPM1J-202ENST00000464951 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
PPM1J-202ENST00000464951 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
PPM1J-202ENST00000464951 CECR2Q9BXF3 1484 aa26.53■■□□□ 1.84
PPM1J-202ENST00000464951 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
PPM1J-202ENST00000464951 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
PPM1J-202ENST00000464951 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
PPM1J-202ENST00000464951 HRCP23327 699 aa26.21■■□□□ 1.79
PPM1J-202ENST00000464951 WIZO95785 1651 aa26.18■■□□□ 1.78
PPM1J-202ENST00000464951 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
PPM1J-202ENST00000464951 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
PPM1J-202ENST00000464951 LOC105371045A0A1W2PR82 267 aa25.91■■□□□ 1.74
PPM1J-202ENST00000464951 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
PPM1J-202ENST00000464951 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
PPM1J-202ENST00000464951 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
PPM1J-202ENST00000464951 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.7
PPM1J-202ENST00000464951 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
PPM1J-202ENST00000464951 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
PPM1J-202ENST00000464951 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.68
PPM1J-202ENST00000464951 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
PPM1J-202ENST00000464951 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
PPM1J-202ENST00000464951 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
PPM1J-202ENST00000464951 TRIM26Q12899 539 aaPredicted RBP25.37■■□□□ 1.65
PPM1J-202ENST00000464951 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
PPM1J-202ENST00000464951 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
PPM1J-202ENST00000464951 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
PPM1J-202ENST00000464951 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
PPM1J-202ENST00000464951 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
PPM1J-202ENST00000464951 EHMT2Q96KQ7 1210 aa25.16■■□□□ 1.62
PPM1J-202ENST00000464951 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
PPM1J-202ENST00000464951 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.59
PPM1J-202ENST00000464951 CFTRP13569 1480 aa24.87■■□□□ 1.57
PPM1J-202ENST00000464951 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
PPM1J-202ENST00000464951 SOGA1O94964 1423 aa24.8■■□□□ 1.56
PPM1J-202ENST00000464951 ZEB1P37275 1124 aaPredicted RBP24.79■■□□□ 1.56
PPM1J-202ENST00000464951 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
PPM1J-202ENST00000464951 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
PPM1J-202ENST00000464951 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
PPM1J-202ENST00000464951 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
PPM1J-202ENST00000464951 TOP2BQ02880 1626 aa24.69■■□□□ 1.54
PPM1J-202ENST00000464951 NESP48681 1621 aa24.67■■□□□ 1.54
PPM1J-202ENST00000464951 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
PPM1J-202ENST00000464951 CUX1P39880 1505 aa24.62■■□□□ 1.53
PPM1J-202ENST00000464951 EEA1Q15075 1411 aa24.61■■□□□ 1.53
PPM1J-202ENST00000464951 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
PPM1J-202ENST00000464951 MYT1Q01538 1121 aa24.58■■□□□ 1.53
PPM1J-202ENST00000464951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
PPM1J-202ENST00000464951 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
PPM1J-202ENST00000464951 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
PPM1J-202ENST00000464951 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
PPM1J-202ENST00000464951 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
PPM1J-202ENST00000464951 GOLGA3Q08378 1498 aa24.35■■□□□ 1.49
PPM1J-202ENST00000464951 TNIKQ9UKE5 1360 aa24.34■■□□□ 1.49
PPM1J-202ENST00000464951 CCER1Q8TC90 406 aaPredicted RBP24.33■■□□□ 1.49
PPM1J-202ENST00000464951 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.48
PPM1J-202ENST00000464951 KIF21BO75037 1637 aa24.32■■□□□ 1.48
PPM1J-202ENST00000464951 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
PPM1J-202ENST00000464951 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
PPM1J-202ENST00000464951 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
PPM1J-202ENST00000464951 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
PPM1J-202ENST00000464951 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
PPM1J-202ENST00000464951 PDS5BQ9NTI5 1447 aa24.25■■□□□ 1.47
PPM1J-202ENST00000464951 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
PPM1J-202ENST00000464951 CUX2O14529 1486 aa24.21■■□□□ 1.47
PPM1J-202ENST00000464951 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
PPM1J-202ENST00000464951 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
PPM1J-202ENST00000464951 RANGAP1P46060 587 aaPredicted RBP24.19■■□□□ 1.46
PPM1J-202ENST00000464951 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
PPM1J-202ENST00000464951 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
PPM1J-202ENST00000464951 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
PPM1J-202ENST00000464951 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
PPM1J-202ENST00000464951 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
PPM1J-202ENST00000464951 IGF1RP08069 1367 aa24.1■■□□□ 1.45
PPM1J-202ENST00000464951 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
PPM1J-202ENST00000464951 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
PPM1J-202ENST00000464951 CLIP1P30622 1438 aa24.02■■□□□ 1.44
PPM1J-202ENST00000464951 DIEXFQ68CQ4 756 aaKnown RBP24.01■■□□□ 1.43
PPM1J-202ENST00000464951 CARMIL1Q5VZK9 1371 aa23.97■■□□□ 1.43
PPM1J-202ENST00000464951 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
PPM1J-202ENST00000464951 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
PPM1J-202ENST00000464951 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
PPM1J-202ENST00000464951 GTF3C3Q9Y5Q9 886 aa23.91■■□□□ 1.42
PPM1J-202ENST00000464951 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
PPM1J-202ENST00000464951 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
PPM1J-202ENST00000464951 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.41
PPM1J-202ENST00000464951 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
PPM1J-202ENST00000464951 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms