RNA–Protein interactions for RNA: ENST00000464875.1

DENND6A-202, Transcript of DENN domain containing 6A, humanhuman

TSL 2

Gene DENND6A, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND6A-202ENST00000464875 NISCHQ9Y2I1 1504 aa38.47■■■■□ 3.75
DENND6A-202ENST00000464875 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.07
DENND6A-202ENST00000464875 ABCC9O60706 1549 aa33.83■■■■□ 3.01
DENND6A-202ENST00000464875 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
DENND6A-202ENST00000464875 NACADO15069 1562 aa32.31■■■□□ 2.76
DENND6A-202ENST00000464875 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
DENND6A-202ENST00000464875 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
DENND6A-202ENST00000464875 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
DENND6A-202ENST00000464875 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
DENND6A-202ENST00000464875 UNC13AQ9UPW8 1703 aa31.63■■■□□ 2.65
DENND6A-202ENST00000464875 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
DENND6A-202ENST00000464875 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
DENND6A-202ENST00000464875 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
DENND6A-202ENST00000464875 SCRIBQ14160 1630 aa31.25■■■□□ 2.59
DENND6A-202ENST00000464875 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
DENND6A-202ENST00000464875 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
DENND6A-202ENST00000464875 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
DENND6A-202ENST00000464875 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
DENND6A-202ENST00000464875 SMARCA4P51532 1647 aa29.88■■■□□ 2.37
DENND6A-202ENST00000464875 NCAPD3P42695 1498 aa29.85■■■□□ 2.37
DENND6A-202ENST00000464875 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
DENND6A-202ENST00000464875 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
DENND6A-202ENST00000464875 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
DENND6A-202ENST00000464875 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
DENND6A-202ENST00000464875 HMGXB3Q12766 1538 aa29.63■■■□□ 2.33
DENND6A-202ENST00000464875 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
DENND6A-202ENST00000464875 BAZ1BQ9UIG0 1483 aaKnown RBP29.54■■■□□ 2.32
DENND6A-202ENST00000464875 WIZO95785 1651 aa29.29■■■□□ 2.28
DENND6A-202ENST00000464875 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
DENND6A-202ENST00000464875 NESP48681 1621 aa29.2■■■□□ 2.27
DENND6A-202ENST00000464875 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
DENND6A-202ENST00000464875 LAMC3Q9Y6N6 1575 aa29.06■■■□□ 2.24
DENND6A-202ENST00000464875 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
DENND6A-202ENST00000464875 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
DENND6A-202ENST00000464875 CUX2O14529 1486 aa28.96■■■□□ 2.23
DENND6A-202ENST00000464875 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
DENND6A-202ENST00000464875 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
DENND6A-202ENST00000464875 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
DENND6A-202ENST00000464875 CFTRP13569 1480 aa28.73■■■□□ 2.19
DENND6A-202ENST00000464875 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
DENND6A-202ENST00000464875 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
DENND6A-202ENST00000464875 MRC2Q9UBG0 1479 aa28.61■■■□□ 2.17
DENND6A-202ENST00000464875 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
DENND6A-202ENST00000464875 WDR62O43379 1518 aa28.51■■■□□ 2.15
DENND6A-202ENST00000464875 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
DENND6A-202ENST00000464875 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
DENND6A-202ENST00000464875 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
DENND6A-202ENST00000464875 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
DENND6A-202ENST00000464875 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
DENND6A-202ENST00000464875 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
DENND6A-202ENST00000464875 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
DENND6A-202ENST00000464875 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
DENND6A-202ENST00000464875 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
DENND6A-202ENST00000464875 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
DENND6A-202ENST00000464875 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
DENND6A-202ENST00000464875 CUX1P39880 1505 aa27.82■■■□□ 2.04
DENND6A-202ENST00000464875 SOGA1O94964 1423 aa27.78■■■□□ 2.04
DENND6A-202ENST00000464875 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
DENND6A-202ENST00000464875 OSCARQ8IYS5 282 aa27.77■■■□□ 2.04
DENND6A-202ENST00000464875 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
DENND6A-202ENST00000464875 EIF4G3O43432 1585 aaKnown RBP27.75■■■□□ 2.03
DENND6A-202ENST00000464875 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.03
DENND6A-202ENST00000464875 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
DENND6A-202ENST00000464875 WDR97A6NE52 1622 aa27.57■■■□□ 2
DENND6A-202ENST00000464875 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
DENND6A-202ENST00000464875 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
DENND6A-202ENST00000464875 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
DENND6A-202ENST00000464875 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
DENND6A-202ENST00000464875 FBLN2P98095 1184 aa27.48■■□□□ 1.99
DENND6A-202ENST00000464875 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
DENND6A-202ENST00000464875 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
DENND6A-202ENST00000464875 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
DENND6A-202ENST00000464875 CHD1O14646 1710 aa27.44■■□□□ 1.98
DENND6A-202ENST00000464875 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
DENND6A-202ENST00000464875 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
DENND6A-202ENST00000464875 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
DENND6A-202ENST00000464875 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
DENND6A-202ENST00000464875 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
DENND6A-202ENST00000464875 PBRM1Q86U86 1689 aa27.33■■□□□ 1.97
DENND6A-202ENST00000464875 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
DENND6A-202ENST00000464875 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
DENND6A-202ENST00000464875 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
DENND6A-202ENST00000464875 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
DENND6A-202ENST00000464875 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
DENND6A-202ENST00000464875 CLASP1Q7Z460 1538 aa27.17■■□□□ 1.94
DENND6A-202ENST00000464875 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
DENND6A-202ENST00000464875 ADAMTS12P58397 1594 aa27.12■■□□□ 1.93
DENND6A-202ENST00000464875 FHAD1B1AJZ9 1412 aa27.11■■□□□ 1.93
DENND6A-202ENST00000464875 GRIN2AQ12879 1464 aa27.1■■□□□ 1.93
DENND6A-202ENST00000464875 CYB5RLQ6IPT4 315 aa27.08■■□□□ 1.93
DENND6A-202ENST00000464875 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
DENND6A-202ENST00000464875 NUP160Q12769 1436 aa27■■□□□ 1.91
DENND6A-202ENST00000464875 KIF27Q86VH2 1401 aa27■■□□□ 1.91
DENND6A-202ENST00000464875 CEP170Q5SW79 1584 aa26.97■■□□□ 1.91
DENND6A-202ENST00000464875 IGF1RP08069 1367 aa26.96■■□□□ 1.91
DENND6A-202ENST00000464875 CUL7Q14999 1698 aa26.82■■□□□ 1.88
DENND6A-202ENST00000464875 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
DENND6A-202ENST00000464875 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
DENND6A-202ENST00000464875 ERCC6L2Q5T890 1561 aa26.79■■□□□ 1.88
DENND6A-202ENST00000464875 JPH4Q96JJ6 628 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms