RNA–Protein interactions for RNA: ENST00000464712.1

PHF19-209, Transcript of PHD finger protein 19, humanhuman

TSL 4

Gene PHF19, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-209ENST00000464712 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
PHF19-209ENST00000464712 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
PHF19-209ENST00000464712 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
PHF19-209ENST00000464712 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
PHF19-209ENST00000464712 PLPPR3Q6T4P5 718 aa16.18■□□□□ 0.18
PHF19-209ENST00000464712 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
PHF19-209ENST00000464712 FOXD1Q16676 465 aa15.75■□□□□ 0.11
PHF19-209ENST00000464712 ADRA2BP18089 450 aa15.42■□□□□ 0.06
PHF19-209ENST00000464712 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
PHF19-209ENST00000464712 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
PHF19-209ENST00000464712 MSH5O43196 834 aa14.37□□□□□ -0.11
PHF19-209ENST00000464712 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
PHF19-209ENST00000464712 KCNA4P22459 653 aa14.31□□□□□ -0.12
PHF19-209ENST00000464712 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
PHF19-209ENST00000464712 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
PHF19-209ENST00000464712 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
PHF19-209ENST00000464712 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
PHF19-209ENST00000464712 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
PHF19-209ENST00000464712 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
PHF19-209ENST00000464712 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
PHF19-209ENST00000464712 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
PHF19-209ENST00000464712 DMRT2Q9Y5R5 561 aa13.57□□□□□ -0.24
PHF19-209ENST00000464712 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
PHF19-209ENST00000464712 ABCC9O60706 1549 aa13.34□□□□□ -0.27
PHF19-209ENST00000464712 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
PHF19-209ENST00000464712 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
PHF19-209ENST00000464712 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
PHF19-209ENST00000464712 ZBTB22O15209 634 aa13.16□□□□□ -0.3
PHF19-209ENST00000464712 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
PHF19-209ENST00000464712 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
PHF19-209ENST00000464712 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
PHF19-209ENST00000464712 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
PHF19-209ENST00000464712 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
PHF19-209ENST00000464712 NACADO15069 1562 aa13.03□□□□□ -0.32
PHF19-209ENST00000464712 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
PHF19-209ENST00000464712 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
PHF19-209ENST00000464712 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
PHF19-209ENST00000464712 UNC13AQ9UPW8 1703 aa12.87□□□□□ -0.35
PHF19-209ENST00000464712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■■■□□ 17.8
PHF19-209ENST00000464712 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
PHF19-209ENST00000464712 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
PHF19-209ENST00000464712 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
PHF19-209ENST00000464712 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
PHF19-209ENST00000464712 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
PHF19-209ENST00000464712 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
PHF19-209ENST00000464712 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
PHF19-209ENST00000464712 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
PHF19-209ENST00000464712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
PHF19-209ENST00000464712 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
PHF19-209ENST00000464712 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
PHF19-209ENST00000464712 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
PHF19-209ENST00000464712 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
PHF19-209ENST00000464712 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
PHF19-209ENST00000464712 APLP2Q06481 763 aa12.28□□□□□ -0.44
PHF19-209ENST00000464712 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
PHF19-209ENST00000464712 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
PHF19-209ENST00000464712 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
PHF19-209ENST00000464712 MROH2BQ7Z745 1585 aa12.23□□□□□ -0.45
PHF19-209ENST00000464712 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
PHF19-209ENST00000464712 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
PHF19-209ENST00000464712 CAPN15O75808 1086 aa12.2□□□□□ -0.46
PHF19-209ENST00000464712 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
PHF19-209ENST00000464712 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
PHF19-209ENST00000464712 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
PHF19-209ENST00000464712 WIZO95785 1651 aa12.16□□□□□ -0.46
PHF19-209ENST00000464712 CC2D2AQ9P2K1 1620 aa12.13□□□□□ -0.47
PHF19-209ENST00000464712 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
PHF19-209ENST00000464712 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
PHF19-209ENST00000464712 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
PHF19-209ENST00000464712 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
PHF19-209ENST00000464712 POLA2Q14181 598 aa12.03□□□□□ -0.48
PHF19-209ENST00000464712 FKBP8Q14318 412 aa12.03□□□□□ -0.48
PHF19-209ENST00000464712 ABCB7O75027 752 aa12.02□□□□□ -0.49
PHF19-209ENST00000464712 NCAPD3P42695 1498 aa12.02□□□□□ -0.49
PHF19-209ENST00000464712 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
PHF19-209ENST00000464712 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
PHF19-209ENST00000464712 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
PHF19-209ENST00000464712 CACNB1Q02641 598 aaPredicted RBP11.94□□□□□ -0.5
PHF19-209ENST00000464712 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
PHF19-209ENST00000464712 DSG3P32926 999 aa11.87□□□□□ -0.51
PHF19-209ENST00000464712 FBLN2P98095 1184 aa11.87□□□□□ -0.51
PHF19-209ENST00000464712 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
PHF19-209ENST00000464712 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
PHF19-209ENST00000464712 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
PHF19-209ENST00000464712 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
PHF19-209ENST00000464712 CFTRP13569 1480 aa11.68□□□□□ -0.54
PHF19-209ENST00000464712 NESP48681 1621 aa11.68□□□□□ -0.54
PHF19-209ENST00000464712 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
PHF19-209ENST00000464712 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
PHF19-209ENST00000464712 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
PHF19-209ENST00000464712 KIF21AQ7Z4S6 1674 aa11.61□□□□□ -0.55
PHF19-209ENST00000464712 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
PHF19-209ENST00000464712 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
PHF19-209ENST00000464712 ABCC8Q09428 1581 aa11.52□□□□□ -0.57
PHF19-209ENST00000464712 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
PHF19-209ENST00000464712 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
PHF19-209ENST00000464712 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
PHF19-209ENST00000464712 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
PHF19-209ENST00000464712 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
PHF19-209ENST00000464712 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms