RNA–Protein interactions for RNA: ENST00000463956.1

MYD88-208, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

TSL 4

Gene MYD88, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-208ENST00000463956 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
MYD88-208ENST00000463956 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
MYD88-208ENST00000463956 ABCC9O60706 1549 aa30.61■■■□□ 2.49
MYD88-208ENST00000463956 DCAF8L2P0C7V8 631 aa29.44■■■□□ 2.3
MYD88-208ENST00000463956 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
MYD88-208ENST00000463956 NACADO15069 1562 aa29.3■■■□□ 2.28
MYD88-208ENST00000463956 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
MYD88-208ENST00000463956 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
MYD88-208ENST00000463956 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
MYD88-208ENST00000463956 UNC13AQ9UPW8 1703 aa28.67■■■□□ 2.18
MYD88-208ENST00000463956 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.18
MYD88-208ENST00000463956 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
MYD88-208ENST00000463956 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
MYD88-208ENST00000463956 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
MYD88-208ENST00000463956 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
MYD88-208ENST00000463956 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
MYD88-208ENST00000463956 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.02
MYD88-208ENST00000463956 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
MYD88-208ENST00000463956 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
MYD88-208ENST00000463956 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
MYD88-208ENST00000463956 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
MYD88-208ENST00000463956 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
MYD88-208ENST00000463956 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
MYD88-208ENST00000463956 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
MYD88-208ENST00000463956 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
MYD88-208ENST00000463956 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
MYD88-208ENST00000463956 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
MYD88-208ENST00000463956 WIZO95785 1651 aa26.75■■□□□ 1.87
MYD88-208ENST00000463956 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
MYD88-208ENST00000463956 NESP48681 1621 aa26.47■■□□□ 1.83
MYD88-208ENST00000463956 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
MYD88-208ENST00000463956 ERCC6Q03468 1493 aa26.38■■□□□ 1.81
MYD88-208ENST00000463956 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
MYD88-208ENST00000463956 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
MYD88-208ENST00000463956 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
MYD88-208ENST00000463956 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
MYD88-208ENST00000463956 CFTRP13569 1480 aa26.11■■□□□ 1.77
MYD88-208ENST00000463956 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
MYD88-208ENST00000463956 KIF21AQ7Z4S6 1674 aa26.11■■□□□ 1.77
MYD88-208ENST00000463956 CUX2O14529 1486 aa26.06■■□□□ 1.76
MYD88-208ENST00000463956 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
MYD88-208ENST00000463956 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
MYD88-208ENST00000463956 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
MYD88-208ENST00000463956 MRC2Q9UBG0 1479 aa25.92■■□□□ 1.74
MYD88-208ENST00000463956 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
MYD88-208ENST00000463956 WDR62O43379 1518 aa25.82■■□□□ 1.72
MYD88-208ENST00000463956 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
MYD88-208ENST00000463956 TOPBP1Q92547 1522 aa25.58■■□□□ 1.68
MYD88-208ENST00000463956 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
MYD88-208ENST00000463956 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
MYD88-208ENST00000463956 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
MYD88-208ENST00000463956 CUX1P39880 1505 aa25.37■■□□□ 1.65
MYD88-208ENST00000463956 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
MYD88-208ENST00000463956 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
MYD88-208ENST00000463956 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
MYD88-208ENST00000463956 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
MYD88-208ENST00000463956 RAD54L2Q9Y4B4 1467 aa25.28■■□□□ 1.64
MYD88-208ENST00000463956 SOGA1O94964 1423 aa25.27■■□□□ 1.64
MYD88-208ENST00000463956 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
MYD88-208ENST00000463956 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.63
MYD88-208ENST00000463956 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.621e-6■■■■■ 35.7
MYD88-208ENST00000463956 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
MYD88-208ENST00000463956 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
MYD88-208ENST00000463956 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
MYD88-208ENST00000463956 TOP2BQ02880 1626 aa25.11■■□□□ 1.61
MYD88-208ENST00000463956 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
MYD88-208ENST00000463956 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
MYD88-208ENST00000463956 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
MYD88-208ENST00000463956 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
MYD88-208ENST00000463956 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
MYD88-208ENST00000463956 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
MYD88-208ENST00000463956 FBLN2P98095 1184 aa24.95■■□□□ 1.58
MYD88-208ENST00000463956 SNAPC4Q5SXM2 1469 aa24.95■■□□□ 1.58
MYD88-208ENST00000463956 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
MYD88-208ENST00000463956 MAGI1Q96QZ7 1491 aaPredicted RBP24.88■■□□□ 1.57
MYD88-208ENST00000463956 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
MYD88-208ENST00000463956 CHD1O14646 1710 aa24.87■■□□□ 1.57
MYD88-208ENST00000463956 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
MYD88-208ENST00000463956 SYNJ2O15056 1496 aa24.79■■□□□ 1.56
MYD88-208ENST00000463956 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
MYD88-208ENST00000463956 ADAMTS12P58397 1594 aa24.69■■□□□ 1.54
MYD88-208ENST00000463956 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
MYD88-208ENST00000463956 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
MYD88-208ENST00000463956 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
MYD88-208ENST00000463956 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
MYD88-208ENST00000463956 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
MYD88-208ENST00000463956 RIMBP3CA6NJZ7 1639 aa24.6■■□□□ 1.53
MYD88-208ENST00000463956 RIMBP3BA6NNM3 1639 aa24.6■■□□□ 1.53
MYD88-208ENST00000463956 RIMBP3Q9UFD9 1639 aa24.6■■□□□ 1.53
MYD88-208ENST00000463956 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
MYD88-208ENST00000463956 IGF1RP08069 1367 aa24.59■■□□□ 1.53
MYD88-208ENST00000463956 NUP160Q12769 1436 aa24.52■■□□□ 1.52
MYD88-208ENST00000463956 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
MYD88-208ENST00000463956 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
MYD88-208ENST00000463956 CUL7Q14999 1698 aa24.46■■□□□ 1.51
MYD88-208ENST00000463956 CARMIL1Q5VZK9 1371 aa24.45■■□□□ 1.5
MYD88-208ENST00000463956 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
MYD88-208ENST00000463956 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
MYD88-208ENST00000463956 ERCC6L2Q5T890 1561 aa24.31■■□□□ 1.48
MYD88-208ENST00000463956 JPH4Q96JJ6 628 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms