RNA–Protein interactions for RNA: ENST00000463548.1

PNCK-219, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

TSL 5

Gene PNCK, Length 783 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-219ENST00000463548 SF3A3Q12874 501 aaKnown RBP eCLIP14.82□□□□□ -0.046e-9■■■■■ 59.3
PNCK-219ENST00000463548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.64■■■□□ 2.185e-8■■■■■ 55.7
PNCK-219ENST00000463548 EWSR1Q01844 656 aaKnown RBP eCLIP13.42□□□□□ -0.267e-11■■■■■ 47.4
PNCK-219ENST00000463548 SF3B4Q15427 424 aaKnown RBP eCLIP16.47■□□□□ 0.234e-7■■■■■ 46.8
PNCK-219ENST00000463548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■■■■ 44.1
PNCK-219ENST00000463548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.89■□□□□ 0.932e-15■■■■■ 35.7
PNCK-219ENST00000463548 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.569e-7■■■■■ 32.3
PNCK-219ENST00000463548 PRPF4O43172 522 aaKnown RBP eCLIP17.11■□□□□ 0.332e-8■■■■■ 31
PNCK-219ENST00000463548 PPIGQ13427 754 aaKnown RBP eCLIP21.44■■□□□ 1.025e-7■■■■■ 29.6
PNCK-219ENST00000463548 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.926e-8■■■■■ 29.2
PNCK-219ENST00000463548 RBFOX2O43251 390 aaKnown RBP eCLIP13.29□□□□□ -0.287e-8■■■■■ 27.7
PNCK-219ENST00000463548 NCBP2P52298 156 aaKnown RBP eCLIP16.12■□□□□ 0.176e-6■■■■■ 27.5
PNCK-219ENST00000463548 U2AF1Q01081 240 aaKnown RBP eCLIP24.03■■□□□ 1.442e-7■■■■□ 25.8
PNCK-219ENST00000463548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.24■■■□□ 2.119e-8■■■■□ 24.2
PNCK-219ENST00000463548 EIF4G2P78344 907 aaKnown RBP eCLIP24.69■■□□□ 1.542e-9■■■■□ 23.5
PNCK-219ENST00000463548 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.79■□□□□ 0.69e-7■■■■□ 22.4
PNCK-219ENST00000463548 DKC1O60832 514 aaKnown RBP eCLIP20.12■□□□□ 0.812e-12■■■■□ 21.5
PNCK-219ENST00000463548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.36■□□□□ 0.532e-11■■■■□ 20.8
PNCK-219ENST00000463548 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.67■■□□□ 1.061e-6■■■■□ 19.3
PNCK-219ENST00000463548 SRSF1Q07955 248 aaKnown RBP eCLIP17.98■□□□□ 0.472e-7■■■□□ 17.3
PNCK-219ENST00000463548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.11■□□□□ 0.336e-7■■■□□ 17
PNCK-219ENST00000463548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.96■□□□□ 0.631e-6■■■□□ 14.7
PNCK-219ENST00000463548 EFTUD2Q15029 972 aaKnown RBP eCLIP16.63■□□□□ 0.253e-16■■□□□ 14.2
PNCK-219ENST00000463548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.47■□□□□ 0.394e-7■■□□□ 13.7
PNCK-219ENST00000463548 AATFQ9NY61 560 aaKnown RBP eCLIP22.12■■□□□ 1.136e-6■■□□□ 13
PNCK-219ENST00000463548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.77■□□□□ 0.125e-17■■□□□ 12.1
PNCK-219ENST00000463548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.53■■□□□ 1.047e-6■□□□□ 10.8
PNCK-219ENST00000463548 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.45■■□□□ 1.027e-13■□□□□ 10.8
PNCK-219ENST00000463548 XRCC6P12956 609 aaKnown RBP eCLIP19.91■□□□□ 0.789e-7■□□□□ 10.3
PNCK-219ENST00000463548 GPKOWQ92917 476 aaPredicted RBP eCLIP20.88■□□□□ 0.931e-9■□□□□ 8.2
PNCK-219ENST00000463548 ZNF622Q969S3 477 aaKnown RBP eCLIP24.19■■□□□ 1.464e-6■□□□□ 8.2
Retrieved 31 of 31 RNA–protein pairs in 8.3 ms