RNA–Protein interactions for RNA: ENST00000463456.5

LRPPRC-206, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 3,549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-206ENST00000463456 SUB1P53999 127 aaKnown RBP eCLIP3.81□□□□□ -1.87e-19■■■■■ 201.5
LRPPRC-206ENST00000463456 SF3B1O75533 1304 aaKnown RBP eCLIP5.2□□□□□ -1.584e-7■■■■■ 86.2
LRPPRC-206ENST00000463456 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.75□□□□□ -1.658e-71■■■■■ 58.7
LRPPRC-206ENST00000463456 RBM22Q9NW64 420 aaKnown RBP eCLIP4.71□□□□□ -1.661e-7■■■■■ 57
LRPPRC-206ENST00000463456 LARP4Q71RC2 724 aaKnown RBP eCLIP4.8□□□□□ -1.643e-6■■■■■ 39.6
LRPPRC-206ENST00000463456 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4□□□□□ -1.774e-10■■■■■ 27.5
LRPPRC-206ENST00000463456 NOLC1Q14978 699 aaKnown RBP eCLIP6.03□□□□□ -1.442e-13■■■■■ 27.5
LRPPRC-206ENST00000463456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.9□□□□□ -1.954e-7■■■■□ 26
LRPPRC-206ENST00000463456 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.673e-7■■■■□ 25.7
LRPPRC-206ENST00000463456 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.3□□□□□ -1.564e-9■■■■□ 24.9
LRPPRC-206ENST00000463456 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.42□□□□□ -1.542e-11■■■■□ 23
LRPPRC-206ENST00000463456 PCBP2Q15366 365 aaKnown RBP eCLIP4.58□□□□□ -1.688e-10■■■■□ 22.3
LRPPRC-206ENST00000463456 AQRO60306 1485 aaKnown RBP eCLIP6.23□□□□□ -1.413e-8■■■■□ 21.1
LRPPRC-206ENST00000463456 TIA1P31483 386 aaKnown RBP eCLIP4.4□□□□□ -1.715e-6■■■■□ 20.5
LRPPRC-206ENST00000463456 YBX3P16989 372 aaKnown RBP eCLIP5.13□□□□□ -1.592e-9■■■□□ 17.5
LRPPRC-206ENST00000463456 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.54□□□□□ -1.682e-7■■■□□ 16.6
LRPPRC-206ENST00000463456 FXR2P51116 673 aaKnown RBP eCLIP5□□□□□ -1.612e-7■■■□□ 16.2
LRPPRC-206ENST00000463456 G3BP1Q13283 466 aaKnown RBP eCLIP5.72□□□□□ -1.494e-7■■■□□ 15.2
LRPPRC-206ENST00000463456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.09□□□□□ -1.431e-7■■□□□ 14.4
LRPPRC-206ENST00000463456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.32□□□□□ -1.562e-11■■□□□ 14.4
LRPPRC-206ENST00000463456 KHSRPQ92945 711 aaKnown RBP eCLIP4.62□□□□□ -1.679e-7■■□□□ 14.1
LRPPRC-206ENST00000463456 SF3B4Q15427 424 aaKnown RBP eCLIP5.17□□□□□ -1.585e-7■■□□□ 13.7
LRPPRC-206ENST00000463456 PUM1Q14671 1186 aaKnown RBP eCLIP4.87□□□□□ -1.639e-6■■□□□ 13.5
LRPPRC-206ENST00000463456 GPKOWQ92917 476 aaPredicted RBP eCLIP4.83□□□□□ -1.642e-6■■□□□ 12.1
LRPPRC-206ENST00000463456 PABPC4Q13310 644 aaKnown RBP eCLIP5.63□□□□□ -1.514e-16■■□□□ 12
LRPPRC-206ENST00000463456 DDX6P26196 483 aaKnown RBP eCLIP4.84□□□□□ -1.635e-8■■□□□ 11.4
LRPPRC-206ENST00000463456 FUBP3Q96I24 572 aaKnown RBP eCLIP4.81□□□□□ -1.642e-8■□□□□ 10.5
LRPPRC-206ENST00000463456 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.32□□□□□ -1.563e-6■□□□□ 9.7
LRPPRC-206ENST00000463456 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.81□□□□□ -1.645e-6■□□□□ 9.7
LRPPRC-206ENST00000463456 ZC3H11AO75152 810 aaKnown RBP eCLIP5.22□□□□□ -1.574e-8■□□□□ 9.5
LRPPRC-206ENST00000463456 HNRNPLP14866 589 aaKnown RBP eCLIP4.77□□□□□ -1.656e-9■□□□□ 9.4
Retrieved 31 of 31 RNA–protein pairs in 10.2 ms