RNA–Protein interactions for RNA: ENST00000462272.5

RARB-205, Transcript of retinoic acid receptor beta, humanhuman

TSL 3

Gene RARB, Length 1,258 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-205ENST00000462272 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
RARB-205ENST00000462272 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
RARB-205ENST00000462272 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
RARB-205ENST00000462272 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
RARB-205ENST00000462272 PHF23Q9BUL5 403 aaPredicted RBP14.38□□□□□ -0.11
RARB-205ENST00000462272 FOXD1Q16676 465 aa13.91□□□□□ -0.18
RARB-205ENST00000462272 MSH5O43196 834 aa13.66□□□□□ -0.22
RARB-205ENST00000462272 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
RARB-205ENST00000462272 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
RARB-205ENST00000462272 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
RARB-205ENST00000462272 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
RARB-205ENST00000462272 POTEHQ6S545 545 aa12.05□□□□□ -0.48
RARB-205ENST00000462272 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
RARB-205ENST00000462272 ADRA2BP18089 450 aa11.8□□□□□ -0.52
RARB-205ENST00000462272 ABCC9O60706 1549 aa11.57□□□□□ -0.56
RARB-205ENST00000462272 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
RARB-205ENST00000462272 DMRT2Q9Y5R5 561 aa11.48□□□□□ -0.57
RARB-205ENST00000462272 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
RARB-205ENST00000462272 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
RARB-205ENST00000462272 C1QBPQ07021 282 aaKnown RBP11.25□□□□□ -0.61
RARB-205ENST00000462272 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
RARB-205ENST00000462272 RB1CC1Q8TDY2 1594 aa10.99□□□□□ -0.65
RARB-205ENST00000462272 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
RARB-205ENST00000462272 KCNA4P22459 653 aa10.97□□□□□ -0.65
RARB-205ENST00000462272 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
RARB-205ENST00000462272 NACADO15069 1562 aa10.92□□□□□ -0.66
RARB-205ENST00000462272 SCAF1Q9H7N4 1312 aaKnown RBP10.9□□□□□ -0.66
RARB-205ENST00000462272 PABPN1Q86U42 306 aaKnown RBP eCLIP10.79□□□□□ -0.68
RARB-205ENST00000462272 MYO15BQ96JP2 1530 aa10.76□□□□□ -0.69
RARB-205ENST00000462272 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
RARB-205ENST00000462272 ZCCHC6Q5VYS8 1495 aaKnown RBP10.75□□□□□ -0.69
RARB-205ENST00000462272 UNC13AQ9UPW8 1703 aa10.68□□□□□ -0.7
RARB-205ENST00000462272 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
RARB-205ENST00000462272 BICRAQ9NZM4 1560 aa10.66□□□□□ -0.7
RARB-205ENST00000462272 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
RARB-205ENST00000462272 DCAF1Q9Y4B6 1507 aa10.65□□□□□ -0.7
RARB-205ENST00000462272 SP7Q8TDD2 431 aaPredicted RBP10.64□□□□□ -0.71
RARB-205ENST00000462272 CNKSR2Q8WXI2 1034 aa10.61□□□□□ -0.71
RARB-205ENST00000462272 SCRIBQ14160 1630 aa10.61□□□□□ -0.71
RARB-205ENST00000462272 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
RARB-205ENST00000462272 SHROOM4Q9ULL8 1493 aa10.51□□□□□ -0.73
RARB-205ENST00000462272 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
RARB-205ENST00000462272 HOXD11P31277 338 aaPredicted RBP10.47□□□□□ -0.73
RARB-205ENST00000462272 SLC4A1APQ9BWU0 796 aaKnown RBP10.45□□□□□ -0.74
RARB-205ENST00000462272 CC2D2AQ9P2K1 1620 aa10.41□□□□□ -0.74
RARB-205ENST00000462272 EIF4G1Q04637 1599 aaKnown RBP10.41□□□□□ -0.74
RARB-205ENST00000462272 CECR2Q9BXF3 1484 aa10.4□□□□□ -0.74
RARB-205ENST00000462272 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
RARB-205ENST00000462272 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
RARB-205ENST00000462272 DSG3P32926 999 aa10.25□□□□□ -0.77
RARB-205ENST00000462272 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
RARB-205ENST00000462272 ZBTB22O15209 634 aa10.14□□□□□ -0.79
RARB-205ENST00000462272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.11□□□□□ -0.79
RARB-205ENST00000462272 ATAD2BQ9ULI0 1458 aa10.09□□□□□ -0.79
RARB-205ENST00000462272 CAPN15O75808 1086 aa10.08□□□□□ -0.8
RARB-205ENST00000462272 SMARCA4P51532 1647 aa10.07□□□□□ -0.8
RARB-205ENST00000462272 NCAPD3P42695 1498 aa10.07□□□□□ -0.8
RARB-205ENST00000462272 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
RARB-205ENST00000462272 BAZ1AQ9NRL2 1556 aaPredicted RBP10.04□□□□□ -0.8
RARB-205ENST00000462272 HMGXB3Q12766 1538 aa10.02□□□□□ -0.8
RARB-205ENST00000462272 SLC4A2P04920 1241 aa10.01□□□□□ -0.81
RARB-205ENST00000462272 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
RARB-205ENST00000462272 ERCC6Q03468 1493 aa9.99□□□□□ -0.81
RARB-205ENST00000462272 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
RARB-205ENST00000462272 MROH2BQ7Z745 1585 aa9.99□□□□□ -0.81
RARB-205ENST00000462272 LHX8Q68G74 356 aa9.97□□□□□ -0.81
RARB-205ENST00000462272 PEG3Q9GZU2 1588 aa9.95□□□□□ -0.82
RARB-205ENST00000462272 NESP48681 1621 aa9.95□□□□□ -0.82
RARB-205ENST00000462272 HAX1O00165 279 aa9.94□□□□□ -0.82
RARB-205ENST00000462272 SPINK5Q9NQ38 1064 aaPredicted RBP9.93□□□□□ -0.82
RARB-205ENST00000462272 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
RARB-205ENST00000462272 CUX2O14529 1486 aa9.91□□□□□ -0.82
RARB-205ENST00000462272 WIZO95785 1651 aa9.86□□□□□ -0.83
RARB-205ENST00000462272 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
RARB-205ENST00000462272 THOC2Q8NI27 1593 aaKnown RBP9.81□□□□□ -0.84
RARB-205ENST00000462272 DNAJC5Q9H3Z4 198 aa9.81□□□□□ -0.84
RARB-205ENST00000462272 RSF1Q96T23 1441 aaPredicted RBP9.81□□□□□ -0.84
RARB-205ENST00000462272 PDS5BQ9NTI5 1447 aa9.81□□□□□ -0.84
RARB-205ENST00000462272 CADPSQ9ULU8 1353 aa9.79□□□□□ -0.84
RARB-205ENST00000462272 KIF21AQ7Z4S6 1674 aa9.77□□□□□ -0.84
RARB-205ENST00000462272 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
RARB-205ENST00000462272 MYCNP04198 464 aaPredicted RBP9.74□□□□□ -0.85
RARB-205ENST00000462272 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
RARB-205ENST00000462272 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
RARB-205ENST00000462272 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.86
RARB-205ENST00000462272 CFTRP13569 1480 aa9.7□□□□□ -0.86
RARB-205ENST00000462272 WDR62O43379 1518 aa9.69□□□□□ -0.86
RARB-205ENST00000462272 ABCB7O75027 752 aa9.69□□□□□ -0.86
RARB-205ENST00000462272 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
RARB-205ENST00000462272 PIP4P2Q8N4L2 257 aa9.64□□□□□ -0.87
RARB-205ENST00000462272 CCDC88BA6NC98 1476 aa9.64□□□□□ -0.87
RARB-205ENST00000462272 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
RARB-205ENST00000462272 URB2Q14146 1524 aaKnown RBP9.62□□□□□ -0.87
RARB-205ENST00000462272 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
RARB-205ENST00000462272 EVX2Q03828 476 aa9.57□□□□□ -0.88
RARB-205ENST00000462272 ATF5Q9Y2D1 282 aaPredicted RBP9.57□□□□□ -0.88
RARB-205ENST00000462272 PRDM2Q13029 1718 aa9.53□□□□□ -0.88
RARB-205ENST00000462272 TOPBP1Q92547 1522 aa9.52□□□□□ -0.88
RARB-205ENST00000462272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.52□□□□□ -0.89
RARB-205ENST00000462272 HNRNPUL2Q1KMD3 747 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms