RNA–Protein interactions for RNA: ENST00000461701.5

ATG2A-204, Transcript of autophagy related 2A, humanhuman

TSL 2

Gene ATG2A, Length 2,031 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2A-204ENST00000461701 NISCHQ9Y2I1 1504 aa42.43■■■■■ 4.38
ATG2A-204ENST00000461701 CCDC180Q9P1Z9 1646 aa36.53■■■■□ 3.44
ATG2A-204ENST00000461701 ZCCHC6Q5VYS8 1495 aaKnown RBP35.77■■■■□ 3.32
ATG2A-204ENST00000461701 SHROOM4Q9ULL8 1493 aa35.33■■■■□ 3.25
ATG2A-204ENST00000461701 DCAF8L2P0C7V8 631 aa35.03■■■■□ 3.2
ATG2A-204ENST00000461701 DCAF1Q9Y4B6 1507 aa34.97■■■■□ 3.19
ATG2A-204ENST00000461701 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
ATG2A-204ENST00000461701 ABCC9O60706 1549 aa34.26■■■■□ 3.07
ATG2A-204ENST00000461701 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.07
ATG2A-204ENST00000461701 NACADO15069 1562 aa33.91■■■■□ 3.02
ATG2A-204ENST00000461701 SCRIBQ14160 1630 aa33.89■■■■□ 3.02
ATG2A-204ENST00000461701 RB1CC1Q8TDY2 1594 aa33.58■■■□□ 2.97
ATG2A-204ENST00000461701 RSF1Q96T23 1441 aaPredicted RBP33.25■■■□□ 2.91
ATG2A-204ENST00000461701 CHIC1Q5VXU3 224 aa33.18■■■□□ 2.9
ATG2A-204ENST00000461701 CECR2Q9BXF3 1484 aa33.03■■■□□ 2.88
ATG2A-204ENST00000461701 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
ATG2A-204ENST00000461701 MROH2BQ7Z745 1585 aa32.88■■■□□ 2.85
ATG2A-204ENST00000461701 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
ATG2A-204ENST00000461701 WIZO95785 1651 aa32.65■■■□□ 2.82
ATG2A-204ENST00000461701 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
ATG2A-204ENST00000461701 SMARCA4P51532 1647 aa32.46■■■□□ 2.79
ATG2A-204ENST00000461701 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
ATG2A-204ENST00000461701 TOP2AP11388 1531 aaKnown RBP32.24■■■□□ 2.75
ATG2A-204ENST00000461701 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
ATG2A-204ENST00000461701 LOC105371045A0A1W2PR82 267 aa32.04■■■□□ 2.72
ATG2A-204ENST00000461701 EIF4G1Q04637 1599 aaKnown RBP32.01■■■□□ 2.72
ATG2A-204ENST00000461701 CCDC88BA6NC98 1476 aa32.01■■■□□ 2.71
ATG2A-204ENST00000461701 SMARCA2P51531 1590 aa32■■■□□ 2.71
ATG2A-204ENST00000461701 PEG3Q9GZU2 1588 aa31.97■■■□□ 2.71
ATG2A-204ENST00000461701 ATAD2BQ9ULI0 1458 aa31.78■■■□□ 2.68
ATG2A-204ENST00000461701 FAM9AQ8IZU1 332 aaPredicted RBP31.7■■■□□ 2.66
ATG2A-204ENST00000461701 BAZ1BQ9UIG0 1483 aaKnown RBP31.63■■■□□ 2.65
ATG2A-204ENST00000461701 ABCC8Q09428 1581 aa31.61■■■□□ 2.65
ATG2A-204ENST00000461701 NCAPD3P42695 1498 aa31.34■■■□□ 2.61
ATG2A-204ENST00000461701 EHMT2Q96KQ7 1210 aa31.31■■■□□ 2.6
ATG2A-204ENST00000461701 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
ATG2A-204ENST00000461701 PCGF6Q9BYE7 350 aa31.28■■■□□ 2.6
ATG2A-204ENST00000461701 WRNQ14191 1432 aaPredicted RBP eCLIP31.24■■■□□ 2.59
ATG2A-204ENST00000461701 SOGA1O94964 1423 aa31.18■■■□□ 2.58
ATG2A-204ENST00000461701 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
ATG2A-204ENST00000461701 EEA1Q15075 1411 aa31.07■■■□□ 2.56
ATG2A-204ENST00000461701 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
ATG2A-204ENST00000461701 RUSC2Q8N2Y8 1516 aa31.05■■■□□ 2.56
ATG2A-204ENST00000461701 TRIM26Q12899 539 aaPredicted RBP31■■■□□ 2.55
ATG2A-204ENST00000461701 CSRNP3Q8WYN3 585 aa30.97■■■□□ 2.55
ATG2A-204ENST00000461701 HRCP23327 699 aa30.9■■■□□ 2.54
ATG2A-204ENST00000461701 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
ATG2A-204ENST00000461701 CFTRP13569 1480 aa30.86■■■□□ 2.53
ATG2A-204ENST00000461701 TNIKQ9UKE5 1360 aa30.8■■■□□ 2.52
ATG2A-204ENST00000461701 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
ATG2A-204ENST00000461701 GOLGA3Q08378 1498 aa30.75■■■□□ 2.51
ATG2A-204ENST00000461701 CEP162Q5TB80 1403 aa30.73■■■□□ 2.51
ATG2A-204ENST00000461701 UBTFP17480 764 aaKnown RBP30.68■■■□□ 2.5
ATG2A-204ENST00000461701 CUX1P39880 1505 aa30.67■■■□□ 2.5
ATG2A-204ENST00000461701 KIF21BO75037 1637 aa30.66■■■□□ 2.5
ATG2A-204ENST00000461701 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
ATG2A-204ENST00000461701 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
ATG2A-204ENST00000461701 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
ATG2A-204ENST00000461701 PPARGC1BQ86YN6 1023 aaKnown RBP30.52■■■□□ 2.48
ATG2A-204ENST00000461701 RAPGEF2Q9Y4G8 1499 aa30.48■■■□□ 2.47
ATG2A-204ENST00000461701 KIF27Q86VH2 1401 aa30.36■■■□□ 2.45
ATG2A-204ENST00000461701 PRXQ9BXM0 1461 aa30.36■■■□□ 2.45
ATG2A-204ENST00000461701 CLIP1P30622 1438 aa30.32■■■□□ 2.44
ATG2A-204ENST00000461701 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
ATG2A-204ENST00000461701 FANCD2Q9BXW9 1451 aa30.3■■■□□ 2.44
ATG2A-204ENST00000461701 NESP48681 1621 aa30.24■■■□□ 2.43
ATG2A-204ENST00000461701 FGD5Q6ZNL6 1462 aa30.23■■■□□ 2.43
ATG2A-204ENST00000461701 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.43
ATG2A-204ENST00000461701 CUX2O14529 1486 aa30.17■■■□□ 2.42
ATG2A-204ENST00000461701 TTBK1Q5TCY1 1321 aaPredicted RBP30.14■■■□□ 2.41
ATG2A-204ENST00000461701 VPS8Q8N3P4 1428 aa30.13■■■□□ 2.41
ATG2A-204ENST00000461701 DNMBPQ6XZF7 1577 aa30.11■■■□□ 2.41
ATG2A-204ENST00000461701 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
ATG2A-204ENST00000461701 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
ATG2A-204ENST00000461701 IGF1RP08069 1367 aa30.09■■■□□ 2.41
ATG2A-204ENST00000461701 TOPBP1Q92547 1522 aa30.05■■■□□ 2.4
ATG2A-204ENST00000461701 ZEB1P37275 1124 aaPredicted RBP30.04■■■□□ 2.4
ATG2A-204ENST00000461701 POLA1P09884 1462 aaPredicted RBP29.98■■■□□ 2.39
ATG2A-204ENST00000461701 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
ATG2A-204ENST00000461701 ARAP1Q96P48 1450 aa29.95■■■□□ 2.39
ATG2A-204ENST00000461701 CARMIL1Q5VZK9 1371 aa29.93■■■□□ 2.38
ATG2A-204ENST00000461701 ABCA10Q8WWZ4 1543 aa29.93■■■□□ 2.38
ATG2A-204ENST00000461701 URB2Q14146 1524 aaKnown RBP29.92■■■□□ 2.38
ATG2A-204ENST00000461701 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
ATG2A-204ENST00000461701 APLP2Q06481 763 aa29.86■■■□□ 2.37
ATG2A-204ENST00000461701 KIF21AQ7Z4S6 1674 aa29.86■■■□□ 2.37
ATG2A-204ENST00000461701 ARHGAP35Q9NRY4 1499 aa29.81■■■□□ 2.36
ATG2A-204ENST00000461701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.79■■■□□ 2.36
ATG2A-204ENST00000461701 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
ATG2A-204ENST00000461701 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
ATG2A-204ENST00000461701 CUL7Q14999 1698 aa29.66■■■□□ 2.34
ATG2A-204ENST00000461701 ABCA5Q8WWZ7 1642 aa29.62■■■□□ 2.33
ATG2A-204ENST00000461701 TDRD9Q8NDG6 1382 aaKnown RBP29.61■■■□□ 2.33
ATG2A-204ENST00000461701 KANK4Q5T7N3 995 aaPredicted RBP29.59■■■□□ 2.33
ATG2A-204ENST00000461701 GAPVD1Q14C86 1478 aa29.55■■■□□ 2.32
ATG2A-204ENST00000461701 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
ATG2A-204ENST00000461701 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
ATG2A-204ENST00000461701 HNRNPUL2Q1KMD3 747 aaKnown RBP29.52■■■□□ 2.32
ATG2A-204ENST00000461701 CTTNBP2Q8WZ74 1663 aa29.46■■■□□ 2.31
ATG2A-204ENST00000461701 ERCC6Q03468 1493 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms