RNA–Protein interactions for RNA: ENST00000461263.2

MDH2-205, Transcript of malate dehydrogenase 2, humanhuman

TSL 2 BASIC

Gene MDH2, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH2-205ENST00000461263 NISCHQ9Y2I1 1504 aa34.9■■■■□ 3.18
MDH2-205ENST00000461263 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
MDH2-205ENST00000461263 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
MDH2-205ENST00000461263 DNAJC5BQ9UF47 199 aa28.95■■■□□ 2.22
MDH2-205ENST00000461263 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
MDH2-205ENST00000461263 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
MDH2-205ENST00000461263 SHROOM4Q9ULL8 1493 aa28.76■■■□□ 2.19
MDH2-205ENST00000461263 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
MDH2-205ENST00000461263 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
MDH2-205ENST00000461263 ABCC9O60706 1549 aa28.27■■■□□ 2.12
MDH2-205ENST00000461263 NACADO15069 1562 aa28.08■■■□□ 2.09
MDH2-205ENST00000461263 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
MDH2-205ENST00000461263 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
MDH2-205ENST00000461263 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
MDH2-205ENST00000461263 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
MDH2-205ENST00000461263 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
MDH2-205ENST00000461263 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
MDH2-205ENST00000461263 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
MDH2-205ENST00000461263 MROH2BQ7Z745 1585 aa26.96■■□□□ 1.91
MDH2-205ENST00000461263 BAZ1AQ9NRL2 1556 aaPredicted RBP26.9■■□□□ 1.9
MDH2-205ENST00000461263 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
MDH2-205ENST00000461263 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.87
MDH2-205ENST00000461263 WIZO95785 1651 aa26.73■■□□□ 1.87
MDH2-205ENST00000461263 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
MDH2-205ENST00000461263 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
MDH2-205ENST00000461263 PEG3Q9GZU2 1588 aa26.35■■□□□ 1.81
MDH2-205ENST00000461263 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
MDH2-205ENST00000461263 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
MDH2-205ENST00000461263 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
MDH2-205ENST00000461263 ATAD2BQ9ULI0 1458 aa26.2■■□□□ 1.78
MDH2-205ENST00000461263 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
MDH2-205ENST00000461263 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
MDH2-205ENST00000461263 LOC105371045A0A1W2PR82 267 aa25.98■■□□□ 1.75
MDH2-205ENST00000461263 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
MDH2-205ENST00000461263 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
MDH2-205ENST00000461263 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
MDH2-205ENST00000461263 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
MDH2-205ENST00000461263 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
MDH2-205ENST00000461263 EEA1Q15075 1411 aa25.54■■□□□ 1.68
MDH2-205ENST00000461263 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
MDH2-205ENST00000461263 CFTRP13569 1480 aa25.45■■□□□ 1.66
MDH2-205ENST00000461263 SOGA1O94964 1423 aa25.44■■□□□ 1.66
MDH2-205ENST00000461263 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
MDH2-205ENST00000461263 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
MDH2-205ENST00000461263 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
MDH2-205ENST00000461263 CUX2O14529 1486 aa25.36■■□□□ 1.65
MDH2-205ENST00000461263 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
MDH2-205ENST00000461263 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
MDH2-205ENST00000461263 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
MDH2-205ENST00000461263 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
MDH2-205ENST00000461263 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
MDH2-205ENST00000461263 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
MDH2-205ENST00000461263 TNIKQ9UKE5 1360 aa25.22■■□□□ 1.63
MDH2-205ENST00000461263 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
MDH2-205ENST00000461263 TRIM26Q12899 539 aaPredicted RBP25.19■■□□□ 1.62
MDH2-205ENST00000461263 CUX1P39880 1505 aa25.17■■□□□ 1.62
MDH2-205ENST00000461263 GOLGA3Q08378 1498 aa25.16■■□□□ 1.62
MDH2-205ENST00000461263 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
MDH2-205ENST00000461263 CEP164Q9UPV0 1460 aa25.13■■□□□ 1.61
MDH2-205ENST00000461263 KIF21BO75037 1637 aa25.1■■□□□ 1.61
MDH2-205ENST00000461263 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
MDH2-205ENST00000461263 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
MDH2-205ENST00000461263 KIF27Q86VH2 1401 aa24.98■■□□□ 1.59
MDH2-205ENST00000461263 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
MDH2-205ENST00000461263 ILDR1Q86SU0 546 aaPredicted RBP24.93■■□□□ 1.58
MDH2-205ENST00000461263 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
MDH2-205ENST00000461263 RAPGEF2Q9Y4G8 1499 aa24.88■■□□□ 1.57
MDH2-205ENST00000461263 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
MDH2-205ENST00000461263 NESP48681 1621 aa24.87■■□□□ 1.57
MDH2-205ENST00000461263 HRCP23327 699 aa24.87■■□□□ 1.57
MDH2-205ENST00000461263 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
MDH2-205ENST00000461263 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
MDH2-205ENST00000461263 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
MDH2-205ENST00000461263 CLIP1P30622 1438 aa24.78■■□□□ 1.56
MDH2-205ENST00000461263 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
MDH2-205ENST00000461263 IGF1RP08069 1367 aa24.74■■□□□ 1.55
MDH2-205ENST00000461263 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
MDH2-205ENST00000461263 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
MDH2-205ENST00000461263 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
MDH2-205ENST00000461263 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
MDH2-205ENST00000461263 CARMIL1Q5VZK9 1371 aa24.63■■□□□ 1.53
MDH2-205ENST00000461263 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
MDH2-205ENST00000461263 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
MDH2-205ENST00000461263 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
MDH2-205ENST00000461263 RANGAP1P46060 587 aaPredicted RBP24.53■■□□□ 1.52
MDH2-205ENST00000461263 APLP2Q06481 763 aa24.53■■□□□ 1.52
MDH2-205ENST00000461263 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
MDH2-205ENST00000461263 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
MDH2-205ENST00000461263 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
MDH2-205ENST00000461263 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
MDH2-205ENST00000461263 CUL7Q14999 1698 aa24.42■■□□□ 1.5
MDH2-205ENST00000461263 MRC2Q9UBG0 1479 aa24.41■■□□□ 1.5
MDH2-205ENST00000461263 TTBK1Q5TCY1 1321 aaPredicted RBP24.38■■□□□ 1.49
MDH2-205ENST00000461263 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
MDH2-205ENST00000461263 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
MDH2-205ENST00000461263 GAPVD1Q14C86 1478 aa24.36■■□□□ 1.49
MDH2-205ENST00000461263 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
MDH2-205ENST00000461263 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
MDH2-205ENST00000461263 WDR62O43379 1518 aa24.22■■□□□ 1.47
MDH2-205ENST00000461263 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms