RNA–Protein interactions for RNA: ENST00000460453.1

FBXO18-204, Transcript of F-box DNA helicase 1, humanhuman

TSL 2

Gene FBXO18, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO18-204ENST00000460453 AEBP2Q6ZN18 517 aaPredicted RBP29.74■■■□□ 2.35
FBXO18-204ENST00000460453 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
FBXO18-204ENST00000460453 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
FBXO18-204ENST00000460453 SENP3Q9H4L4 574 aaPredicted RBP25.47■■□□□ 1.67
FBXO18-204ENST00000460453 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
FBXO18-204ENST00000460453 FOXD1Q16676 465 aa23.69■■□□□ 1.38
FBXO18-204ENST00000460453 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.21
FBXO18-204ENST00000460453 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
FBXO18-204ENST00000460453 MSH5O43196 834 aa22.25■■□□□ 1.15
FBXO18-204ENST00000460453 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
FBXO18-204ENST00000460453 PPP6R1Q9UPN7 881 aa22.11■■□□□ 1.13
FBXO18-204ENST00000460453 ADRA2BP18089 450 aa22.09■■□□□ 1.13
FBXO18-204ENST00000460453 POTEDQ86YR6 584 aa21.7■■□□□ 1.06
FBXO18-204ENST00000460453 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.04
FBXO18-204ENST00000460453 ABCC9O60706 1549 aa21.43■■□□□ 1.02
FBXO18-204ENST00000460453 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
FBXO18-204ENST00000460453 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
FBXO18-204ENST00000460453 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
FBXO18-204ENST00000460453 NACADO15069 1562 aa20.94■□□□□ 0.94
FBXO18-204ENST00000460453 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
FBXO18-204ENST00000460453 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
FBXO18-204ENST00000460453 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
FBXO18-204ENST00000460453 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
FBXO18-204ENST00000460453 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
FBXO18-204ENST00000460453 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
FBXO18-204ENST00000460453 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
FBXO18-204ENST00000460453 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
FBXO18-204ENST00000460453 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
FBXO18-204ENST00000460453 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
FBXO18-204ENST00000460453 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
FBXO18-204ENST00000460453 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
FBXO18-204ENST00000460453 PPP4R3CPQ6ZMV5 832 aa19.83■□□□□ 0.77
FBXO18-204ENST00000460453 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.76
FBXO18-204ENST00000460453 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
FBXO18-204ENST00000460453 SUPT5HO00267 1087 aaKnown RBP19.8■□□□□ 0.76
FBXO18-204ENST00000460453 WIZO95785 1651 aa19.79■□□□□ 0.76
FBXO18-204ENST00000460453 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
FBXO18-204ENST00000460453 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
FBXO18-204ENST00000460453 DCAF8L1A6NGE4 600 aa19.49■□□□□ 0.71
FBXO18-204ENST00000460453 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
FBXO18-204ENST00000460453 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
FBXO18-204ENST00000460453 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
FBXO18-204ENST00000460453 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
FBXO18-204ENST00000460453 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
FBXO18-204ENST00000460453 HOXD11P31277 338 aaPredicted RBP19.38■□□□□ 0.69
FBXO18-204ENST00000460453 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
FBXO18-204ENST00000460453 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
FBXO18-204ENST00000460453 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
FBXO18-204ENST00000460453 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
FBXO18-204ENST00000460453 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
FBXO18-204ENST00000460453 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
FBXO18-204ENST00000460453 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
FBXO18-204ENST00000460453 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
FBXO18-204ENST00000460453 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
FBXO18-204ENST00000460453 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
FBXO18-204ENST00000460453 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
FBXO18-204ENST00000460453 CFTRP13569 1480 aa18.84■□□□□ 0.61
FBXO18-204ENST00000460453 NESP48681 1621 aa18.82■□□□□ 0.6
FBXO18-204ENST00000460453 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
FBXO18-204ENST00000460453 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
FBXO18-204ENST00000460453 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
FBXO18-204ENST00000460453 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
FBXO18-204ENST00000460453 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
FBXO18-204ENST00000460453 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
FBXO18-204ENST00000460453 BIVM-ERCC5R4GMW8 1640 aa18.65■□□□□ 0.58
FBXO18-204ENST00000460453 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
FBXO18-204ENST00000460453 CUX1P39880 1505 aa18.62■□□□□ 0.57
FBXO18-204ENST00000460453 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
FBXO18-204ENST00000460453 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
FBXO18-204ENST00000460453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.57
FBXO18-204ENST00000460453 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
FBXO18-204ENST00000460453 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
FBXO18-204ENST00000460453 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
FBXO18-204ENST00000460453 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
FBXO18-204ENST00000460453 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
FBXO18-204ENST00000460453 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
FBXO18-204ENST00000460453 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
FBXO18-204ENST00000460453 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
FBXO18-204ENST00000460453 SOGA1O94964 1423 aa18.4■□□□□ 0.54
FBXO18-204ENST00000460453 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.54
FBXO18-204ENST00000460453 KCNA4P22459 653 aa18.38■□□□□ 0.53
FBXO18-204ENST00000460453 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
FBXO18-204ENST00000460453 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
FBXO18-204ENST00000460453 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.52
FBXO18-204ENST00000460453 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
FBXO18-204ENST00000460453 WDR62O43379 1518 aa18.31■□□□□ 0.52
FBXO18-204ENST00000460453 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
FBXO18-204ENST00000460453 RAD54L2Q9Y4B4 1467 aa18.28■□□□□ 0.52
FBXO18-204ENST00000460453 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
FBXO18-204ENST00000460453 CUX2O14529 1486 aa18.2■□□□□ 0.5
FBXO18-204ENST00000460453 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
FBXO18-204ENST00000460453 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
FBXO18-204ENST00000460453 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
FBXO18-204ENST00000460453 EEA1Q15075 1411 aa18.17■□□□□ 0.5
FBXO18-204ENST00000460453 KIF21BO75037 1637 aa18.14■□□□□ 0.49
FBXO18-204ENST00000460453 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
FBXO18-204ENST00000460453 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
FBXO18-204ENST00000460453 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
FBXO18-204ENST00000460453 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
FBXO18-204ENST00000460453 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms