RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-223ENST00000459783 NISCHQ9Y2I1 1504 aa24.98■■□□□ 1.59
MRPL55-223ENST00000459783 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
MRPL55-223ENST00000459783 ABCC9O60706 1549 aa21.61■■□□□ 1.05
MRPL55-223ENST00000459783 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
MRPL55-223ENST00000459783 NACADO15069 1562 aa20.76■□□□□ 0.91
MRPL55-223ENST00000459783 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
MRPL55-223ENST00000459783 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
MRPL55-223ENST00000459783 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
MRPL55-223ENST00000459783 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
MRPL55-223ENST00000459783 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
MRPL55-223ENST00000459783 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
MRPL55-223ENST00000459783 SCRIBQ14160 1630 aa20.23■□□□□ 0.83
MRPL55-223ENST00000459783 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
MRPL55-223ENST00000459783 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
MRPL55-223ENST00000459783 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
MRPL55-223ENST00000459783 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
MRPL55-223ENST00000459783 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
MRPL55-223ENST00000459783 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
MRPL55-223ENST00000459783 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
MRPL55-223ENST00000459783 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
MRPL55-223ENST00000459783 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
MRPL55-223ENST00000459783 ATAD2BQ9ULI0 1458 aa19.24■□□□□ 0.67
MRPL55-223ENST00000459783 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
MRPL55-223ENST00000459783 PEG3Q9GZU2 1588 aa19.16■□□□□ 0.66
MRPL55-223ENST00000459783 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
MRPL55-223ENST00000459783 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
MRPL55-223ENST00000459783 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
MRPL55-223ENST00000459783 WIZO95785 1651 aa19.06■□□□□ 0.64
MRPL55-223ENST00000459783 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
MRPL55-223ENST00000459783 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
MRPL55-223ENST00000459783 NESP48681 1621 aa18.77■□□□□ 0.6
MRPL55-223ENST00000459783 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
MRPL55-223ENST00000459783 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
MRPL55-223ENST00000459783 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
MRPL55-223ENST00000459783 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
MRPL55-223ENST00000459783 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
MRPL55-223ENST00000459783 CFTRP13569 1480 aa18.57■□□□□ 0.56
MRPL55-223ENST00000459783 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
MRPL55-223ENST00000459783 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
MRPL55-223ENST00000459783 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
MRPL55-223ENST00000459783 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
MRPL55-223ENST00000459783 FANCD2Q9BXW9 1451 aa18.42■□□□□ 0.54
MRPL55-223ENST00000459783 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
MRPL55-223ENST00000459783 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
MRPL55-223ENST00000459783 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
MRPL55-223ENST00000459783 CUX2O14529 1486 aa18.33■□□□□ 0.52
MRPL55-223ENST00000459783 WDR62O43379 1518 aa18.29■□□□□ 0.52
MRPL55-223ENST00000459783 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
MRPL55-223ENST00000459783 TOPBP1Q92547 1522 aa18.16■□□□□ 0.5
MRPL55-223ENST00000459783 DNMBPQ6XZF7 1577 aa18.12■□□□□ 0.49
MRPL55-223ENST00000459783 CUX1P39880 1505 aa18.08■□□□□ 0.49
MRPL55-223ENST00000459783 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
MRPL55-223ENST00000459783 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
MRPL55-223ENST00000459783 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
MRPL55-223ENST00000459783 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
MRPL55-223ENST00000459783 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-223ENST00000459783 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
MRPL55-223ENST00000459783 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
MRPL55-223ENST00000459783 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
MRPL55-223ENST00000459783 SYNJ1O43426 1573 aa17.96■□□□□ 0.46
MRPL55-223ENST00000459783 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
MRPL55-223ENST00000459783 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
MRPL55-223ENST00000459783 SOGA1O94964 1423 aa17.9■□□□□ 0.46
MRPL55-223ENST00000459783 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.458e-7■■■■■ 27.9
MRPL55-223ENST00000459783 EIF4G3O43432 1585 aaKnown RBP17.86■□□□□ 0.45
MRPL55-223ENST00000459783 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
MRPL55-223ENST00000459783 WDR97A6NE52 1622 aa17.83■□□□□ 0.44
MRPL55-223ENST00000459783 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
MRPL55-223ENST00000459783 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
MRPL55-223ENST00000459783 ABCA5Q8WWZ7 1642 aa17.73■□□□□ 0.43
MRPL55-223ENST00000459783 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
MRPL55-223ENST00000459783 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
MRPL55-223ENST00000459783 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
MRPL55-223ENST00000459783 PBRM1Q86U86 1689 aa17.64■□□□□ 0.41
MRPL55-223ENST00000459783 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-223ENST00000459783 CHD1O14646 1710 aa17.58■□□□□ 0.41
MRPL55-223ENST00000459783 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
MRPL55-223ENST00000459783 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
MRPL55-223ENST00000459783 ERICH3Q5RHP9 1530 aa17.56■□□□□ 0.4
MRPL55-223ENST00000459783 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
MRPL55-223ENST00000459783 FBLN2P98095 1184 aa17.54■□□□□ 0.4
MRPL55-223ENST00000459783 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
MRPL55-223ENST00000459783 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
MRPL55-223ENST00000459783 IGF1RP08069 1367 aa17.52■□□□□ 0.39
MRPL55-223ENST00000459783 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
MRPL55-223ENST00000459783 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
MRPL55-223ENST00000459783 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
MRPL55-223ENST00000459783 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
MRPL55-223ENST00000459783 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
MRPL55-223ENST00000459783 NUP160Q12769 1436 aa17.42■□□□□ 0.38
MRPL55-223ENST00000459783 CEP170Q5SW79 1584 aa17.41■□□□□ 0.38
MRPL55-223ENST00000459783 CUL7Q14999 1698 aa17.39■□□□□ 0.37
MRPL55-223ENST00000459783 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
MRPL55-223ENST00000459783 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
MRPL55-223ENST00000459783 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
MRPL55-223ENST00000459783 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
MRPL55-223ENST00000459783 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
MRPL55-223ENST00000459783 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
MRPL55-223ENST00000459783 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
MRPL55-223ENST00000459783 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms