RNA–Protein interactions for RNA: ENST00000458572.1

EIF3D-208, Transcript of eukaryotic translation initiation factor 3 subunit D, humanhuman

TSL 3

Gene EIF3D, Length 883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3D-208ENST00000458572 SF3B1O75533 1304 aaKnown RBP eCLIP9.25□□□□□ -0.931e-7■■■■■ 172.3
EIF3D-208ENST00000458572 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.41□□□□□ -1.067e-9■■■■■ 72.6
EIF3D-208ENST00000458572 MATR3P43243 847 aaKnown RBP eCLIP9.39□□□□□ -0.915e-12■■■■■ 42.7
EIF3D-208ENST00000458572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.26□□□□□ -0.771e-7■■■■■ 36.7
EIF3D-208ENST00000458572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.24□□□□□ -0.935e-7■■■■■ 32
EIF3D-208ENST00000458572 AQRO60306 1485 aaKnown RBP eCLIP14.62□□□□□ -0.076e-7■■■■■ 30.5
EIF3D-208ENST00000458572 NOLC1Q14978 699 aaKnown RBP eCLIP9.39□□□□□ -0.914e-7■■■■□ 25.6
EIF3D-208ENST00000458572 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.49□□□□□ -0.894e-8■■■■□ 24.9
EIF3D-208ENST00000458572 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.83□□□□□ -11e-9■■■■□ 24.8
EIF3D-208ENST00000458572 HNRNPKP61978 463 aaKnown RBP eCLIP8.48□□□□□ -1.057e-7■■■■□ 23.8
EIF3D-208ENST00000458572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.16□□□□□ -1.269e-8■■■■□ 23.1
EIF3D-208ENST00000458572 RPS3P23396 243 aaKnown RBP eCLIP8.44□□□□□ -1.061e-7■■■■□ 22.8
EIF3D-208ENST00000458572 U2AF2P26368 475 aaKnown RBP eCLIP9.77□□□□□ -0.857e-9■■■■□ 21.1
EIF3D-208ENST00000458572 G3BP1Q13283 466 aaKnown RBP eCLIP10.65□□□□□ -0.77e-7■■■■□ 19.9
EIF3D-208ENST00000458572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.45□□□□□ -0.98e-9■■■■□ 19.4
EIF3D-208ENST00000458572 SUB1P53999 127 aaKnown RBP eCLIP6.62□□□□□ -1.358e-7■■■□□ 17
EIF3D-208ENST00000458572 AARSP49588 968 aaKnown RBP eCLIP9.25□□□□□ -0.931e-6■■■□□ 15.5
EIF3D-208ENST00000458572 SND1Q7KZF4 910 aaKnown RBP eCLIP8.91□□□□□ -0.982e-6■■□□□ 14.3
EIF3D-208ENST00000458572 TARDBPQ13148 414 aaKnown RBP eCLIP8.3□□□□□ -1.083e-6■■□□□ 14.1
EIF3D-208ENST00000458572 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.866e-8■■□□□ 13.1
EIF3D-208ENST00000458572 METAP2P50579 478 aaKnown RBP eCLIP9.99□□□□□ -0.812e-6■■□□□ 12.2
EIF3D-208ENST00000458572 PCBP2Q15366 365 aaKnown RBP eCLIP8.24□□□□□ -1.096e-6■■□□□ 12.1
EIF3D-208ENST00000458572 SF3B4Q15427 424 aaKnown RBP eCLIP7.69□□□□□ -1.183e-6■■□□□ 12
EIF3D-208ENST00000458572 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.56□□□□□ -1.042e-7■■□□□ 12
EIF3D-208ENST00000458572 PUM1Q14671 1186 aaKnown RBP eCLIP8.36□□□□□ -1.072e-6■■□□□ 11.6
EIF3D-208ENST00000458572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■□□□□ 11.3
EIF3D-208ENST00000458572 KHSRPQ92945 711 aaKnown RBP eCLIP9□□□□□ -0.974e-6■□□□□ 11.1
EIF3D-208ENST00000458572 FMR1Q06787 632 aaKnown RBP eCLIP10.37□□□□□ -0.752e-6■□□□□ 10.8
EIF3D-208ENST00000458572 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.688e-10■□□□□ 10.5
EIF3D-208ENST00000458572 PPIGQ13427 754 aaKnown RBP eCLIP9.5□□□□□ -0.896e-6■□□□□ 9.4
EIF3D-208ENST00000458572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.72□□□□□ -1.171e-7■□□□□ 9.2
EIF3D-208ENST00000458572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.07□□□□□ -0.961e-7■□□□□ 9.2
Retrieved 32 of 32 RNA–protein pairs in 8.4 ms