RNA–Protein interactions for RNA: ENST00000457020.3

CT47A11-201, Transcript of cancer/testis antigen family 47, member A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A11, Length 1,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A11-201ENST00000457020 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
CT47A11-201ENST00000457020 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
CT47A11-201ENST00000457020 ABCC9O60706 1549 aa38.21■■■■□ 3.71
CT47A11-201ENST00000457020 RB1CC1Q8TDY2 1594 aa36.58■■■■□ 3.45
CT47A11-201ENST00000457020 DCAF8L2P0C7V8 631 aa36.49■■■■□ 3.43
CT47A11-201ENST00000457020 NACADO15069 1562 aa36.48■■■■□ 3.43
CT47A11-201ENST00000457020 MYO15BQ96JP2 1530 aa36.15■■■■□ 3.38
CT47A11-201ENST00000457020 ZCCHC6Q5VYS8 1495 aaKnown RBP36.04■■■■□ 3.36
CT47A11-201ENST00000457020 DCAF1Q9Y4B6 1507 aa35.87■■■■□ 3.33
CT47A11-201ENST00000457020 UNC13AQ9UPW8 1703 aa35.79■■■■□ 3.32
CT47A11-201ENST00000457020 PABPN1Q86U42 306 aaKnown RBP eCLIP35.71■■■■□ 3.31
CT47A11-201ENST00000457020 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.28
CT47A11-201ENST00000457020 DNAJC5BQ9UF47 199 aa35.48■■■■□ 3.27
CT47A11-201ENST00000457020 SCRIBQ14160 1630 aa35.26■■■■□ 3.24
CT47A11-201ENST00000457020 SHROOM4Q9ULL8 1493 aa35.04■■■■□ 3.2
CT47A11-201ENST00000457020 EIF4G1Q04637 1599 aaKnown RBP34.58■■■■□ 3.13
CT47A11-201ENST00000457020 CC2D2AQ9P2K1 1620 aa34.54■■■■□ 3.12
CT47A11-201ENST00000457020 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
CT47A11-201ENST00000457020 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
CT47A11-201ENST00000457020 NCAPD3P42695 1498 aa33.69■■■□□ 2.98
CT47A11-201ENST00000457020 ATAD2BQ9ULI0 1458 aa33.65■■■□□ 2.98
CT47A11-201ENST00000457020 BAZ1AQ9NRL2 1556 aaPredicted RBP33.63■■■□□ 2.97
CT47A11-201ENST00000457020 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
CT47A11-201ENST00000457020 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
CT47A11-201ENST00000457020 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
CT47A11-201ENST00000457020 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
CT47A11-201ENST00000457020 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
CT47A11-201ENST00000457020 WIZO95785 1651 aa33.07■■■□□ 2.88
CT47A11-201ENST00000457020 NESP48681 1621 aa32.98■■■□□ 2.87
CT47A11-201ENST00000457020 RSF1Q96T23 1441 aaPredicted RBP32.95■■■□□ 2.87
CT47A11-201ENST00000457020 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
CT47A11-201ENST00000457020 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.84
CT47A11-201ENST00000457020 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.83
CT47A11-201ENST00000457020 CUX2O14529 1486 aa32.7■■■□□ 2.83
CT47A11-201ENST00000457020 TOP2AP11388 1531 aaKnown RBP32.65■■■□□ 2.82
CT47A11-201ENST00000457020 PDS5BQ9NTI5 1447 aa32.63■■■□□ 2.81
CT47A11-201ENST00000457020 KIF21AQ7Z4S6 1674 aa32.55■■■□□ 2.8
CT47A11-201ENST00000457020 THOC2Q8NI27 1593 aaKnown RBP32.49■■■□□ 2.79
CT47A11-201ENST00000457020 CFTRP13569 1480 aa32.42■■■□□ 2.78
CT47A11-201ENST00000457020 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
CT47A11-201ENST00000457020 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
CT47A11-201ENST00000457020 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
CT47A11-201ENST00000457020 CEP164Q9UPV0 1460 aa32.26■■■□□ 2.75
CT47A11-201ENST00000457020 DNAJC5Q9H3Z4 198 aa32.21■■■□□ 2.75
CT47A11-201ENST00000457020 WDR62O43379 1518 aa32.18■■■□□ 2.74
CT47A11-201ENST00000457020 PRDM2Q13029 1718 aa32.1■■■□□ 2.73
CT47A11-201ENST00000457020 URB2Q14146 1524 aaKnown RBP31.99■■■□□ 2.71
CT47A11-201ENST00000457020 SUPT5HO00267 1087 aaKnown RBP31.92■■■□□ 2.7
CT47A11-201ENST00000457020 TOPBP1Q92547 1522 aa31.74■■■□□ 2.67
CT47A11-201ENST00000457020 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
CT47A11-201ENST00000457020 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
CT47A11-201ENST00000457020 IFT140Q96RY7 1462 aa31.61■■■□□ 2.65
CT47A11-201ENST00000457020 ZNF608Q9ULD9 1512 aaPredicted RBP31.52■■■□□ 2.64
CT47A11-201ENST00000457020 POLA1P09884 1462 aaPredicted RBP31.44■■■□□ 2.62
CT47A11-201ENST00000457020 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
CT47A11-201ENST00000457020 OSCARQ8IYS5 282 aa31.4■■■□□ 2.62
CT47A11-201ENST00000457020 CUX1P39880 1505 aa31.37■■■□□ 2.61
CT47A11-201ENST00000457020 SOGA1O94964 1423 aa31.36■■■□□ 2.61
CT47A11-201ENST00000457020 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
CT47A11-201ENST00000457020 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.61
CT47A11-201ENST00000457020 EIF4G3O43432 1585 aaKnown RBP31.32■■■□□ 2.6
CT47A11-201ENST00000457020 FGD5Q6ZNL6 1462 aa31.32■■■□□ 2.6
CT47A11-201ENST00000457020 TDRD9Q8NDG6 1382 aaKnown RBP31.22■■■□□ 2.59
CT47A11-201ENST00000457020 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
CT47A11-201ENST00000457020 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.56
CT47A11-201ENST00000457020 FBLN2P98095 1184 aa31.04■■■□□ 2.56
CT47A11-201ENST00000457020 CHD1O14646 1710 aa31.03■■■□□ 2.56
CT47A11-201ENST00000457020 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
CT47A11-201ENST00000457020 ABCA10Q8WWZ4 1543 aa31■■■□□ 2.55
CT47A11-201ENST00000457020 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
CT47A11-201ENST00000457020 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
CT47A11-201ENST00000457020 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
CT47A11-201ENST00000457020 SNAPC4Q5SXM2 1469 aa30.97■■■□□ 2.55
CT47A11-201ENST00000457020 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
CT47A11-201ENST00000457020 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.55
CT47A11-201ENST00000457020 MAGI1Q96QZ7 1491 aaPredicted RBP30.92■■■□□ 2.54
CT47A11-201ENST00000457020 CHMP7Q8WUX9 453 aaPredicted RBP30.91■■■□□ 2.54
CT47A11-201ENST00000457020 ABCA5Q8WWZ7 1642 aa30.87■■■□□ 2.53
CT47A11-201ENST00000457020 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
CT47A11-201ENST00000457020 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
CT47A11-201ENST00000457020 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
CT47A11-201ENST00000457020 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
CT47A11-201ENST00000457020 SYNJ2O15056 1496 aa30.82■■■□□ 2.52
CT47A11-201ENST00000457020 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
CT47A11-201ENST00000457020 CLASP1Q7Z460 1538 aa30.67■■■□□ 2.5
CT47A11-201ENST00000457020 CYB5RLQ6IPT4 315 aa30.62■■■□□ 2.49
CT47A11-201ENST00000457020 ERICH3Q5RHP9 1530 aa30.62■■■□□ 2.49
CT47A11-201ENST00000457020 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
CT47A11-201ENST00000457020 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
CT47A11-201ENST00000457020 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
CT47A11-201ENST00000457020 ARAP1Q96P48 1450 aa30.52■■■□□ 2.48
CT47A11-201ENST00000457020 NUP160Q12769 1436 aa30.47■■■□□ 2.47
CT47A11-201ENST00000457020 KIF27Q86VH2 1401 aa30.44■■■□□ 2.46
CT47A11-201ENST00000457020 CEP170Q5SW79 1584 aa30.43■■■□□ 2.46
CT47A11-201ENST00000457020 IGF1RP08069 1367 aa30.41■■■□□ 2.46
CT47A11-201ENST00000457020 SHROOM2Q13796 1616 aa30.26■■■□□ 2.44
CT47A11-201ENST00000457020 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
CT47A11-201ENST00000457020 JPH4Q96JJ6 628 aa30.25■■■□□ 2.43
CT47A11-201ENST00000457020 CUL7Q14999 1698 aa30.25■■■□□ 2.43
CT47A11-201ENST00000457020 CARMIL1Q5VZK9 1371 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms