RNA–Protein interactions for RNA: ENST00000456584.5

RABGAP1-205, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 2

Gene RABGAP1, Length 3,897 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-205ENST00000456584 NISCHQ9Y2I1 1504 aa9□□□□□ -0.97
RABGAP1-205ENST00000456584 DNAJC5BQ9UF47 199 aa8.91□□□□□ -0.98
RABGAP1-205ENST00000456584 DNAJC5Q9H3Z4 198 aa8.81□□□□□ -1
RABGAP1-205ENST00000456584 ABCC9O60706 1549 aa8.8□□□□□ -1
RABGAP1-205ENST00000456584 CCDC180Q9P1Z9 1646 aa8.68□□□□□ -1.02
RABGAP1-205ENST00000456584 DCAF8L2P0C7V8 631 aa8.44□□□□□ -1.06
RABGAP1-205ENST00000456584 RB1CC1Q8TDY2 1594 aa8.39□□□□□ -1.07
RABGAP1-205ENST00000456584 UNC13AQ9UPW8 1703 aa8.33□□□□□ -1.08
RABGAP1-205ENST00000456584 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
RABGAP1-205ENST00000456584 BICRAQ9NZM4 1560 aa8.26□□□□□ -1.09
RABGAP1-205ENST00000456584 CUX2O14529 1486 aa8.24□□□□□ -1.09
RABGAP1-205ENST00000456584 NACADO15069 1562 aa8.23□□□□□ -1.09
RABGAP1-205ENST00000456584 CC2D2AQ9P2K1 1620 aa8.16□□□□□ -1.1
RABGAP1-205ENST00000456584 CECR2Q9BXF3 1484 aa8.13□□□□□ -1.11
RABGAP1-205ENST00000456584 MYO15BQ96JP2 1530 aa8.09□□□□□ -1.11
RABGAP1-205ENST00000456584 EIF4G1Q04637 1599 aaKnown RBP8□□□□□ -1.13
RABGAP1-205ENST00000456584 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
RABGAP1-205ENST00000456584 THOC2Q8NI27 1593 aaKnown RBP7.82□□□□□ -1.16
RABGAP1-205ENST00000456584 AEBP2Q6ZN18 517 aaPredicted RBP7.7□□□□□ -1.18
RABGAP1-205ENST00000456584 TRIM41Q8WV44 630 aa7.68□□□□□ -1.18
RABGAP1-205ENST00000456584 DCAF1Q9Y4B6 1507 aa7.67□□□□□ -1.18
RABGAP1-205ENST00000456584 RIMBP3CA6NJZ7 1639 aa7.63□□□□□ -1.19
RABGAP1-205ENST00000456584 RIMBP3BA6NNM3 1639 aa7.63□□□□□ -1.19
RABGAP1-205ENST00000456584 RIMBP3Q9UFD9 1639 aa7.63□□□□□ -1.19
RABGAP1-205ENST00000456584 BAZ1AQ9NRL2 1556 aaPredicted RBP7.63□□□□□ -1.19
RABGAP1-205ENST00000456584 ERCC6Q03468 1493 aa7.63□□□□□ -1.19
RABGAP1-205ENST00000456584 CHIC1Q5VXU3 224 aa7.58□□□□□ -1.2
RABGAP1-205ENST00000456584 PELP1Q8IZL8 1130 aaKnown RBP7.58□□□□□ -1.2
RABGAP1-205ENST00000456584 NCAPD3P42695 1498 aa7.55□□□□□ -1.2
RABGAP1-205ENST00000456584 MYT1Q01538 1121 aa7.54□□□□□ -1.2
RABGAP1-205ENST00000456584 LAMC3Q9Y6N6 1575 aa7.53□□□□□ -1.2
RABGAP1-205ENST00000456584 HMGXB3Q12766 1538 aa7.52□□□□□ -1.21
RABGAP1-205ENST00000456584 WDR62O43379 1518 aa7.52□□□□□ -1.21
RABGAP1-205ENST00000456584 KIF21AQ7Z4S6 1674 aa7.51□□□□□ -1.21
RABGAP1-205ENST00000456584 ARHGEF11O15085 1522 aa7.46□□□□□ -1.21
RABGAP1-205ENST00000456584 ILDR1Q86SU0 546 aaPredicted RBP7.46□□□□□ -1.22
RABGAP1-205ENST00000456584 SCRIBQ14160 1630 aa7.44□□□□□ -1.22
RABGAP1-205ENST00000456584 NESP48681 1621 aa7.41□□□□□ -1.22
RABGAP1-205ENST00000456584 SMARCA2P51531 1590 aa7.37□□□□□ -1.23
RABGAP1-205ENST00000456584 ZCCHC6Q5VYS8 1495 aaKnown RBP7.37□□□□□ -1.23
RABGAP1-205ENST00000456584 MRC2Q9UBG0 1479 aa7.37□□□□□ -1.23
RABGAP1-205ENST00000456584 FAM9AQ8IZU1 332 aaPredicted RBP7.37□□□□□ -1.23
RABGAP1-205ENST00000456584 PEG3Q9GZU2 1588 aa7.36□□□□□ -1.23
RABGAP1-205ENST00000456584 OSCARQ8IYS5 282 aa7.35□□□□□ -1.23
RABGAP1-205ENST00000456584 ARAP1Q96P48 1450 aa7.35□□□□□ -1.23
RABGAP1-205ENST00000456584 ERCC6L2Q5T890 1561 aa7.34□□□□□ -1.23
RABGAP1-205ENST00000456584 ATAD2BQ9ULI0 1458 aa7.33□□□□□ -1.24
RABGAP1-205ENST00000456584 PDS5BQ9NTI5 1447 aa7.31□□□□□ -1.24
RABGAP1-205ENST00000456584 RSF1Q96T23 1441 aaPredicted RBP7.3□□□□□ -1.24
RABGAP1-205ENST00000456584 SUPT5HO00267 1087 aaKnown RBP7.22□□□□□ -1.25
RABGAP1-205ENST00000456584 TTBK1Q5TCY1 1321 aaPredicted RBP7.22□□□□□ -1.25
RABGAP1-205ENST00000456584 SMARCA4P51532 1647 aa7.22□□□□□ -1.25
RABGAP1-205ENST00000456584 CLASP1Q7Z460 1538 aa7.2□□□□□ -1.26
RABGAP1-205ENST00000456584 CHD1O14646 1710 aa7.19□□□□□ -1.26
RABGAP1-205ENST00000456584 KIF13AQ9H1H9 1805 aa7.18□□□□□ -1.26
RABGAP1-205ENST00000456584 PRDM2Q13029 1718 aa7.13□□□□□ -1.27
RABGAP1-205ENST00000456584 FBLN2P98095 1184 aa7.13□□□□□ -1.27
RABGAP1-205ENST00000456584 BAZ1BQ9UIG0 1483 aaKnown RBP7.12□□□□□ -1.27
RABGAP1-205ENST00000456584 CADPSQ9ULU8 1353 aa7.12□□□□□ -1.27
RABGAP1-205ENST00000456584 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
RABGAP1-205ENST00000456584 CEP164Q9UPV0 1460 aa7.12□□□□□ -1.27
RABGAP1-205ENST00000456584 SOCS7O14512 581 aa7.1□□□□□ -1.27
RABGAP1-205ENST00000456584 FBXO41Q8TF61 875 aa7.1□□□□□ -1.27
RABGAP1-205ENST00000456584 WDR97A6NE52 1622 aa7.1□□□□□ -1.27
RABGAP1-205ENST00000456584 EIF4G3O43432 1585 aaKnown RBP7.1□□□□□ -1.27
RABGAP1-205ENST00000456584 URB2Q14146 1524 aaKnown RBP7.09□□□□□ -1.27
RABGAP1-205ENST00000456584 IFT140Q96RY7 1462 aa7.08□□□□□ -1.28
RABGAP1-205ENST00000456584 TRHP20396 242 aaPredicted RBP7.08□□□□□ -1.28
RABGAP1-205ENST00000456584 LMTK3Q96Q04 1460 aa7.06□□□□□ -1.28
RABGAP1-205ENST00000456584 KDM4FA0A1W2PPD8 638 aa7.06□□□□□ -1.28
RABGAP1-205ENST00000456584 CYB5RLQ6IPT4 315 aa7.04□□□□□ -1.28
RABGAP1-205ENST00000456584 PHF23Q9BUL5 403 aaPredicted RBP7.04□□□□□ -1.28
RABGAP1-205ENST00000456584 FANCD2Q9BXW9 1451 aa7.03□□□□□ -1.28
RABGAP1-205ENST00000456584 TARBP1Q13395 1621 aaKnown RBP7.03□□□□□ -1.28
RABGAP1-205ENST00000456584 NPM1P06748 294 aaKnown RBP eCLIP7.02□□□□□ -1.29
RABGAP1-205ENST00000456584 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
RABGAP1-205ENST00000456584 CFTRP13569 1480 aa7.01□□□□□ -1.29
RABGAP1-205ENST00000456584 SYNJ1O43426 1573 aa6.98□□□□□ -1.29
RABGAP1-205ENST00000456584 HRCP23327 699 aa6.96□□□□□ -1.3
RABGAP1-205ENST00000456584 SHROOM2Q13796 1616 aa6.95□□□□□ -1.3
RABGAP1-205ENST00000456584 MAPKBP1O60336 1514 aa6.95□□□□□ -1.3
RABGAP1-205ENST00000456584 KDM6BO15054 1643 aa6.95□□□□□ -1.3
RABGAP1-205ENST00000456584 DIP2BQ9P265 1576 aa6.95□□□□□ -1.3
RABGAP1-205ENST00000456584 CHMP7Q8WUX9 453 aaPredicted RBP6.94□□□□□ -1.3
RABGAP1-205ENST00000456584 SPATA31D1Q6ZQQ2 1576 aa6.94□□□□□ -1.3
RABGAP1-205ENST00000456584 ADGRL1O94910 1474 aa6.92□□□□□ -1.3
RABGAP1-205ENST00000456584 GAPVD1Q14C86 1478 aa6.92□□□□□ -1.3
RABGAP1-205ENST00000456584 ILDR2Q71H61 639 aa6.92□□□□□ -1.3
RABGAP1-205ENST00000456584 ABCC10Q5T3U5 1492 aa6.91□□□□□ -1.3
RABGAP1-205ENST00000456584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.91□□□□□ -1.3
RABGAP1-205ENST00000456584 HNRNPUL2Q1KMD3 747 aaKnown RBP6.91□□□□□ -1.3
RABGAP1-205ENST00000456584 ABCC8Q09428 1581 aa6.9□□□□□ -1.3
RABGAP1-205ENST00000456584 MYT1LQ9UL68 1186 aa6.9□□□□□ -1.3
RABGAP1-205ENST00000456584 PPRC1Q5VV67 1664 aaKnown RBP6.9□□□□□ -1.31
RABGAP1-205ENST00000456584 SYNJ2O15056 1496 aa6.89□□□□□ -1.31
RABGAP1-205ENST00000456584 TOPBP1Q92547 1522 aa6.88□□□□□ -1.31
RABGAP1-205ENST00000456584 ATP1B4Q9UN42 357 aaPredicted RBP6.88□□□□□ -1.31
RABGAP1-205ENST00000456584 DNMBPQ6XZF7 1577 aa6.87□□□□□ -1.31
RABGAP1-205ENST00000456584 MAGI1Q96QZ7 1491 aaPredicted RBP6.87□□□□□ -1.31
RABGAP1-205ENST00000456584 TOP2BQ02880 1626 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms