RNA–Protein interactions for RNA: ENST00000456259.5

PREB-207, Transcript of prolactin regulatory element binding, humanhuman

TSL 2

Gene PREB, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-207ENST00000456259 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
PREB-207ENST00000456259 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
PREB-207ENST00000456259 ABCC9O60706 1549 aa25.03■■□□□ 1.6
PREB-207ENST00000456259 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
PREB-207ENST00000456259 NACADO15069 1562 aa23.93■■□□□ 1.42
PREB-207ENST00000456259 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
PREB-207ENST00000456259 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
PREB-207ENST00000456259 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
PREB-207ENST00000456259 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
PREB-207ENST00000456259 UNC13AQ9UPW8 1703 aa23.4■■□□□ 1.34
PREB-207ENST00000456259 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
PREB-207ENST00000456259 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
PREB-207ENST00000456259 BICRAQ9NZM4 1560 aa23.28■■□□□ 1.32
PREB-207ENST00000456259 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
PREB-207ENST00000456259 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
PREB-207ENST00000456259 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
PREB-207ENST00000456259 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
PREB-207ENST00000456259 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
PREB-207ENST00000456259 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
PREB-207ENST00000456259 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
PREB-207ENST00000456259 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
PREB-207ENST00000456259 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
PREB-207ENST00000456259 SMARCA2P51531 1590 aa22■■□□□ 1.11
PREB-207ENST00000456259 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
PREB-207ENST00000456259 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
PREB-207ENST00000456259 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
PREB-207ENST00000456259 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.09
PREB-207ENST00000456259 WIZO95785 1651 aa21.64■■□□□ 1.05
PREB-207ENST00000456259 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
PREB-207ENST00000456259 NESP48681 1621 aa21.6■■□□□ 1.05
PREB-207ENST00000456259 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
PREB-207ENST00000456259 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
PREB-207ENST00000456259 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
PREB-207ENST00000456259 CUX2O14529 1486 aa21.46■■□□□ 1.03
PREB-207ENST00000456259 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
PREB-207ENST00000456259 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
PREB-207ENST00000456259 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
PREB-207ENST00000456259 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
PREB-207ENST00000456259 CFTRP13569 1480 aa21.28■■□□□ 1
PREB-207ENST00000456259 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
PREB-207ENST00000456259 DNAJC5Q9H3Z4 198 aa21.17■□□□□ 0.98
PREB-207ENST00000456259 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
PREB-207ENST00000456259 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
PREB-207ENST00000456259 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
PREB-207ENST00000456259 WDR62O43379 1518 aa21.1■□□□□ 0.97
PREB-207ENST00000456259 PRDM2Q13029 1718 aa21■□□□□ 0.95
PREB-207ENST00000456259 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
PREB-207ENST00000456259 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
PREB-207ENST00000456259 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
PREB-207ENST00000456259 TOPBP1Q92547 1522 aa20.81■□□□□ 0.92
PREB-207ENST00000456259 DNMBPQ6XZF7 1577 aa20.74■□□□□ 0.91
PREB-207ENST00000456259 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
PREB-207ENST00000456259 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
PREB-207ENST00000456259 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
PREB-207ENST00000456259 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
PREB-207ENST00000456259 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
PREB-207ENST00000456259 SOGA1O94964 1423 aa20.57■□□□□ 0.88
PREB-207ENST00000456259 CUX1P39880 1505 aa20.55■□□□□ 0.88
PREB-207ENST00000456259 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.884e-7■■■■■ 27.6
PREB-207ENST00000456259 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
PREB-207ENST00000456259 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
PREB-207ENST00000456259 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
PREB-207ENST00000456259 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
PREB-207ENST00000456259 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
PREB-207ENST00000456259 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
PREB-207ENST00000456259 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
PREB-207ENST00000456259 FBLN2P98095 1184 aa20.33■□□□□ 0.85
PREB-207ENST00000456259 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
PREB-207ENST00000456259 TOP2BQ02880 1626 aa20.32■□□□□ 0.84
PREB-207ENST00000456259 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
PREB-207ENST00000456259 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
PREB-207ENST00000456259 CHD1O14646 1710 aa20.29■□□□□ 0.84
PREB-207ENST00000456259 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
PREB-207ENST00000456259 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
PREB-207ENST00000456259 SYNJ1O43426 1573 aa20.28■□□□□ 0.84
PREB-207ENST00000456259 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
PREB-207ENST00000456259 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
PREB-207ENST00000456259 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
PREB-207ENST00000456259 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
PREB-207ENST00000456259 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
PREB-207ENST00000456259 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
PREB-207ENST00000456259 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
PREB-207ENST00000456259 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
PREB-207ENST00000456259 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
PREB-207ENST00000456259 CLASP1Q7Z460 1538 aa20.11■□□□□ 0.81
PREB-207ENST00000456259 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
PREB-207ENST00000456259 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
PREB-207ENST00000456259 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
PREB-207ENST00000456259 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
PREB-207ENST00000456259 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
PREB-207ENST00000456259 ARAP1Q96P48 1450 aa20■□□□□ 0.79
PREB-207ENST00000456259 NUP160Q12769 1436 aa20■□□□□ 0.79
PREB-207ENST00000456259 IGF1RP08069 1367 aa19.97■□□□□ 0.79
PREB-207ENST00000456259 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
PREB-207ENST00000456259 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
PREB-207ENST00000456259 JPH4Q96JJ6 628 aa19.85■□□□□ 0.77
PREB-207ENST00000456259 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
PREB-207ENST00000456259 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
PREB-207ENST00000456259 CUL7Q14999 1698 aa19.81■□□□□ 0.76
PREB-207ENST00000456259 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms