RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 POTEDQ86YR6 584 aa9.19□□□□□ -0.94
VSTM2A-OT1-201ENST00000456049 NISCHQ9Y2I1 1504 aa7.09□□□□□ -1.27
VSTM2A-OT1-201ENST00000456049 AEBP2Q6ZN18 517 aaPredicted RBP7.03□□□□□ -1.28
VSTM2A-OT1-201ENST00000456049 POTEHQ6S545 545 aa6.85□□□□□ -1.31
VSTM2A-OT1-201ENST00000456049 CHIC1Q5VXU3 224 aa6.75□□□□□ -1.33
VSTM2A-OT1-201ENST00000456049 MSH5O43196 834 aa6.42□□□□□ -1.38
VSTM2A-OT1-201ENST00000456049 CACNB1Q02641 598 aaPredicted RBP6.38□□□□□ -1.39
VSTM2A-OT1-201ENST00000456049 SENP3Q9H4L4 574 aaPredicted RBP6.36□□□□□ -1.39
VSTM2A-OT1-201ENST00000456049 ABCC9O60706 1549 aa6.27□□□□□ -1.41
VSTM2A-OT1-201ENST00000456049 PLSCR2Q9NRY7 297 aa6.25□□□□□ -1.41
VSTM2A-OT1-201ENST00000456049 CCDC180Q9P1Z9 1646 aa6.18□□□□□ -1.42
VSTM2A-OT1-201ENST00000456049 DCAF8L2P0C7V8 631 aa6.07□□□□□ -1.44
VSTM2A-OT1-201ENST00000456049 PHF23Q9BUL5 403 aaPredicted RBP6.03□□□□□ -1.44
VSTM2A-OT1-201ENST00000456049 FOXD1Q16676 465 aa5.94□□□□□ -1.46
VSTM2A-OT1-201ENST00000456049 PABPN1Q86U42 306 aaKnown RBP eCLIP5.93□□□□□ -1.46
VSTM2A-OT1-201ENST00000456049 ZCCHC6Q5VYS8 1495 aaKnown RBP5.9□□□□□ -1.46
VSTM2A-OT1-201ENST00000456049 DNAJC5BQ9UF47 199 aa5.88□□□□□ -1.47
VSTM2A-OT1-201ENST00000456049 RB1CC1Q8TDY2 1594 aa5.86□□□□□ -1.47
VSTM2A-OT1-201ENST00000456049 UNC13AQ9UPW8 1703 aa5.84□□□□□ -1.47
VSTM2A-OT1-201ENST00000456049 NACADO15069 1562 aa5.83□□□□□ -1.48
VSTM2A-OT1-201ENST00000456049 SCRIBQ14160 1630 aa5.82□□□□□ -1.48
VSTM2A-OT1-201ENST00000456049 BICRAQ9NZM4 1560 aa5.81□□□□□ -1.48
VSTM2A-OT1-201ENST00000456049 SHROOM4Q9ULL8 1493 aa5.8□□□□□ -1.48
VSTM2A-OT1-201ENST00000456049 MYO15BQ96JP2 1530 aa5.75□□□□□ -1.49
VSTM2A-OT1-201ENST00000456049 DCAF1Q9Y4B6 1507 aa5.75□□□□□ -1.49
VSTM2A-OT1-201ENST00000456049 CECR2Q9BXF3 1484 aa5.65□□□□□ -1.5
VSTM2A-OT1-201ENST00000456049 EIF4G1Q04637 1599 aaKnown RBP5.61□□□□□ -1.51
VSTM2A-OT1-201ENST00000456049 CC2D2AQ9P2K1 1620 aa5.61□□□□□ -1.51
VSTM2A-OT1-201ENST00000456049 PCDH10Q9P2E7 1040 aa5.59□□□□□ -1.51
VSTM2A-OT1-201ENST00000456049 SP7Q8TDD2 431 aaPredicted RBP5.58□□□□□ -1.52
VSTM2A-OT1-201ENST00000456049 MROH2BQ7Z745 1585 aa5.54□□□□□ -1.52
VSTM2A-OT1-201ENST00000456049 SMARCA4P51532 1647 aa5.5□□□□□ -1.53
VSTM2A-OT1-201ENST00000456049 ATAD2BQ9ULI0 1458 aa5.49□□□□□ -1.53
VSTM2A-OT1-201ENST00000456049 WIZO95785 1651 aa5.48□□□□□ -1.53
VSTM2A-OT1-201ENST00000456049 NESP48681 1621 aa5.47□□□□□ -1.53
VSTM2A-OT1-201ENST00000456049 RSF1Q96T23 1441 aaPredicted RBP5.46□□□□□ -1.54
VSTM2A-OT1-201ENST00000456049 NCAPD3P42695 1498 aa5.44□□□□□ -1.54
VSTM2A-OT1-201ENST00000456049 BAZ1AQ9NRL2 1556 aaPredicted RBP5.44□□□□□ -1.54
VSTM2A-OT1-201ENST00000456049 SUPT5HO00267 1087 aaKnown RBP5.42□□□□□ -1.54
VSTM2A-OT1-201ENST00000456049 BAZ1BQ9UIG0 1483 aaKnown RBP5.41□□□□□ -1.54
VSTM2A-OT1-201ENST00000456049 PEG3Q9GZU2 1588 aa5.39□□□□□ -1.55
VSTM2A-OT1-201ENST00000456049 SMARCA2P51531 1590 aa5.39□□□□□ -1.55
VSTM2A-OT1-201ENST00000456049 HMGXB3Q12766 1538 aa5.37□□□□□ -1.55
VSTM2A-OT1-201ENST00000456049 CCDC88BA6NC98 1476 aa5.34□□□□□ -1.55
VSTM2A-OT1-201ENST00000456049 PIAS4Q8N2W9 510 aaPredicted RBP5.33□□□□□ -1.56
VSTM2A-OT1-201ENST00000456049 TOP2AP11388 1531 aaKnown RBP5.32□□□□□ -1.56
VSTM2A-OT1-201ENST00000456049 KIF21AQ7Z4S6 1674 aa5.31□□□□□ -1.56
VSTM2A-OT1-201ENST00000456049 ERCC6Q03468 1493 aa5.31□□□□□ -1.56
VSTM2A-OT1-201ENST00000456049 CADPSQ9ULU8 1353 aa5.31□□□□□ -1.56
VSTM2A-OT1-201ENST00000456049 PLPPR3Q6T4P5 718 aa5.29□□□□□ -1.56
VSTM2A-OT1-201ENST00000456049 CFTRP13569 1480 aa5.28□□□□□ -1.56
VSTM2A-OT1-201ENST00000456049 THOC2Q8NI27 1593 aaKnown RBP5.26□□□□□ -1.57
VSTM2A-OT1-201ENST00000456049 FANCD2Q9BXW9 1451 aa5.26□□□□□ -1.57
VSTM2A-OT1-201ENST00000456049 LAMC3Q9Y6N6 1575 aa5.25□□□□□ -1.57
VSTM2A-OT1-201ENST00000456049 URB2Q14146 1524 aaKnown RBP5.25□□□□□ -1.57
VSTM2A-OT1-201ENST00000456049 PDS5BQ9NTI5 1447 aa5.23□□□□□ -1.57
VSTM2A-OT1-201ENST00000456049 CEP164Q9UPV0 1460 aa5.21□□□□□ -1.57
VSTM2A-OT1-201ENST00000456049 ZNF608Q9ULD9 1512 aaPredicted RBP5.21□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 ABCC8Q09428 1581 aa5.21□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 CUX2O14529 1486 aa5.21□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 MRC2Q9UBG0 1479 aa5.2□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 RAD54L2Q9Y4B4 1467 aa5.2□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 WDR62O43379 1518 aa5.19□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 TOPBP1Q92547 1522 aa5.18□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 CUX1P39880 1505 aa5.18□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 AQRO60306 1485 aaKnown RBP eCLIP5.17□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 LHX8Q68G74 356 aa5.17□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 TDRD9Q8NDG6 1382 aaKnown RBP5.17□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 POLA1P09884 1462 aaPredicted RBP5.16□□□□□ -1.58
VSTM2A-OT1-201ENST00000456049 SYNJ1O43426 1573 aa5.15□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 FGD5Q6ZNL6 1462 aa5.14□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 PRDM2Q13029 1718 aa5.14□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 DNAJC5Q9H3Z4 198 aa5.14□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 TARBP1Q13395 1621 aaKnown RBP5.12□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 DNMBPQ6XZF7 1577 aa5.12□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 SOGA1O94964 1423 aa5.11□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 FBLN2P98095 1184 aa5.11□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 EIF4G3O43432 1585 aaKnown RBP5.1□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 WRNQ14191 1432 aaPredicted RBP eCLIP5.1□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 EHMT2Q96KQ7 1210 aa5.1□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 RUSC2Q8N2Y8 1516 aa5.1□□□□□ -1.59
VSTM2A-OT1-201ENST00000456049 C1QBPQ07021 282 aaKnown RBP5.08□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 IFT140Q96RY7 1462 aa5.08□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 SNAPC4Q5SXM2 1469 aa5.06□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 TOP2BQ02880 1626 aa5.06□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 LOC105371045A0A1W2PR82 267 aa5.05□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 FAM9AQ8IZU1 332 aaPredicted RBP5.05□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 TRIM41Q8WV44 630 aa5.05□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 WDR97A6NE52 1622 aa5.05□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 OSCARQ8IYS5 282 aa5.05□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 RNF39Q9H2S5 420 aa5.05□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 CHD1O14646 1710 aa5.04□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 GAPVD1Q14C86 1478 aa5.04□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 BIVM-ERCC5R4GMW8 1640 aa5.04□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 ABCA10Q8WWZ4 1543 aa5.04□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 ERCC6L2Q5T890 1561 aa5.03□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 ABCA5Q8WWZ7 1642 aa5.03□□□□□ -1.6
VSTM2A-OT1-201ENST00000456049 CHMP7Q8WUX9 453 aaPredicted RBP5.02□□□□□ -1.61
VSTM2A-OT1-201ENST00000456049 CYB5RLQ6IPT4 315 aa5.02□□□□□ -1.61
VSTM2A-OT1-201ENST00000456049 IGF1RP08069 1367 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms