RNA–Protein interactions for RNA: ENST00000455263.6

TP53-206, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-206ENST00000455263 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
TP53-206ENST00000455263 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
TP53-206ENST00000455263 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
TP53-206ENST00000455263 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
TP53-206ENST00000455263 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
TP53-206ENST00000455263 ABCC9O60706 1549 aa22.78■■□□□ 1.24
TP53-206ENST00000455263 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
TP53-206ENST00000455263 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
TP53-206ENST00000455263 NACADO15069 1562 aa22.15■■□□□ 1.14
TP53-206ENST00000455263 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
TP53-206ENST00000455263 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
TP53-206ENST00000455263 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
TP53-206ENST00000455263 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
TP53-206ENST00000455263 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
TP53-206ENST00000455263 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
TP53-206ENST00000455263 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
TP53-206ENST00000455263 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
TP53-206ENST00000455263 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
TP53-206ENST00000455263 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
TP53-206ENST00000455263 BAZ1AQ9NRL2 1556 aaPredicted RBP21.15■□□□□ 0.98
TP53-206ENST00000455263 WIZO95785 1651 aa21.14■□□□□ 0.97
TP53-206ENST00000455263 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
TP53-206ENST00000455263 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
TP53-206ENST00000455263 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
TP53-206ENST00000455263 ATAD2BQ9ULI0 1458 aa20.78■□□□□ 0.92
TP53-206ENST00000455263 EIF4G1Q04637 1599 aaKnown RBP20.75■□□□□ 0.91
TP53-206ENST00000455263 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
TP53-206ENST00000455263 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
TP53-206ENST00000455263 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
TP53-206ENST00000455263 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
TP53-206ENST00000455263 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
TP53-206ENST00000455263 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
TP53-206ENST00000455263 CC2D2AQ9P2K1 1620 aa20.46■□□□□ 0.87
TP53-206ENST00000455263 FAM9AQ8IZU1 332 aaPredicted RBP20.44■□□□□ 0.86
TP53-206ENST00000455263 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
TP53-206ENST00000455263 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
TP53-206ENST00000455263 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
TP53-206ENST00000455263 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
TP53-206ENST00000455263 DNAJC5BQ9UF47 199 aa20.3■□□□□ 0.84
TP53-206ENST00000455263 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.82
TP53-206ENST00000455263 CFTRP13569 1480 aa20.11■□□□□ 0.81
TP53-206ENST00000455263 CADPSQ9ULU8 1353 aa20.1■□□□□ 0.81
TP53-206ENST00000455263 SOGA1O94964 1423 aa20.05■□□□□ 0.8
TP53-206ENST00000455263 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
TP53-206ENST00000455263 NESP48681 1621 aa20.02■□□□□ 0.8
TP53-206ENST00000455263 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
TP53-206ENST00000455263 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
TP53-206ENST00000455263 CUX1P39880 1505 aa19.89■□□□□ 0.77
TP53-206ENST00000455263 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
TP53-206ENST00000455263 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
TP53-206ENST00000455263 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
TP53-206ENST00000455263 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
TP53-206ENST00000455263 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
TP53-206ENST00000455263 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
TP53-206ENST00000455263 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
TP53-206ENST00000455263 EEA1Q15075 1411 aa19.74■□□□□ 0.75
TP53-206ENST00000455263 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
TP53-206ENST00000455263 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
TP53-206ENST00000455263 FGD5Q6ZNL6 1462 aa19.68■□□□□ 0.74
TP53-206ENST00000455263 RANGAP1P46060 587 aaPredicted RBP19.66■□□□□ 0.74
TP53-206ENST00000455263 TOPBP1Q92547 1522 aa19.63■□□□□ 0.73
TP53-206ENST00000455263 RAD54L2Q9Y4B4 1467 aa19.62■□□□□ 0.73
TP53-206ENST00000455263 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
TP53-206ENST00000455263 CUX2O14529 1486 aa19.62■□□□□ 0.73
TP53-206ENST00000455263 URB2Q14146 1524 aaKnown RBP19.62■□□□□ 0.73
TP53-206ENST00000455263 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
TP53-206ENST00000455263 RAPGEF2Q9Y4G8 1499 aa19.59■□□□□ 0.73
TP53-206ENST00000455263 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
TP53-206ENST00000455263 GOLGA3Q08378 1498 aa19.58■□□□□ 0.73
TP53-206ENST00000455263 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
TP53-206ENST00000455263 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
TP53-206ENST00000455263 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
TP53-206ENST00000455263 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
TP53-206ENST00000455263 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
TP53-206ENST00000455263 IGF1RP08069 1367 aa19.51■□□□□ 0.71
TP53-206ENST00000455263 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
TP53-206ENST00000455263 KIF21BO75037 1637 aa19.48■□□□□ 0.71
TP53-206ENST00000455263 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
TP53-206ENST00000455263 PRXQ9BXM0 1461 aa19.47■□□□□ 0.71
TP53-206ENST00000455263 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
TP53-206ENST00000455263 CARMIL1Q5VZK9 1371 aa19.42■□□□□ 0.7
TP53-206ENST00000455263 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
TP53-206ENST00000455263 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
TP53-206ENST00000455263 CLIP1P30622 1438 aa19.36■□□□□ 0.69
TP53-206ENST00000455263 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.69
TP53-206ENST00000455263 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.688e-7■■■□□ 16.1
TP53-206ENST00000455263 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
TP53-206ENST00000455263 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
TP53-206ENST00000455263 TARBP1Q13395 1621 aaKnown RBP19.27■□□□□ 0.68
TP53-206ENST00000455263 WDR62O43379 1518 aa19.25■□□□□ 0.67
TP53-206ENST00000455263 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
TP53-206ENST00000455263 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
TP53-206ENST00000455263 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
TP53-206ENST00000455263 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
TP53-206ENST00000455263 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
TP53-206ENST00000455263 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
TP53-206ENST00000455263 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
TP53-206ENST00000455263 VPS8Q8N3P4 1428 aa19.13■□□□□ 0.65
TP53-206ENST00000455263 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
TP53-206ENST00000455263 APLP2Q06481 763 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms