RNA–Protein interactions for RNA: ENST00000455213.6

NEIL2-204, Transcript of nei like DNA glycosylase 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEIL2, Length 2,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL2-204ENST00000455213 NISCHQ9Y2I1 1504 aa36.04■■■■□ 3.36
NEIL2-204ENST00000455213 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
NEIL2-204ENST00000455213 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
NEIL2-204ENST00000455213 SHROOM4Q9ULL8 1493 aa29.97■■■□□ 2.39
NEIL2-204ENST00000455213 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
NEIL2-204ENST00000455213 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
NEIL2-204ENST00000455213 MYO15BQ96JP2 1530 aa29.13■■■□□ 2.25
NEIL2-204ENST00000455213 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
NEIL2-204ENST00000455213 ABCC9O60706 1549 aa29.1■■■□□ 2.25
NEIL2-204ENST00000455213 NACADO15069 1562 aa28.83■■■□□ 2.21
NEIL2-204ENST00000455213 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
NEIL2-204ENST00000455213 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
NEIL2-204ENST00000455213 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
NEIL2-204ENST00000455213 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
NEIL2-204ENST00000455213 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
NEIL2-204ENST00000455213 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
NEIL2-204ENST00000455213 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
NEIL2-204ENST00000455213 HRCP23327 699 aa27.89■■■□□ 2.05
NEIL2-204ENST00000455213 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
NEIL2-204ENST00000455213 WIZO95785 1651 aa27.71■■■□□ 2.03
NEIL2-204ENST00000455213 BICRAQ9NZM4 1560 aa27.69■■■□□ 2.02
NEIL2-204ENST00000455213 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
NEIL2-204ENST00000455213 PCGF6Q9BYE7 350 aa27.58■■■□□ 2.01
NEIL2-204ENST00000455213 SMARCA4P51532 1647 aa27.56■■■□□ 2
NEIL2-204ENST00000455213 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
NEIL2-204ENST00000455213 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
NEIL2-204ENST00000455213 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
NEIL2-204ENST00000455213 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
NEIL2-204ENST00000455213 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
NEIL2-204ENST00000455213 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
NEIL2-204ENST00000455213 PPARGC1BQ86YN6 1023 aaKnown RBP27.12■■□□□ 1.93
NEIL2-204ENST00000455213 EIF4G1Q04637 1599 aaKnown RBP27.12■■□□□ 1.93
NEIL2-204ENST00000455213 TRIM26Q12899 539 aaPredicted RBP27.09■■□□□ 1.93
NEIL2-204ENST00000455213 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
NEIL2-204ENST00000455213 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.89
NEIL2-204ENST00000455213 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
NEIL2-204ENST00000455213 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
NEIL2-204ENST00000455213 ZEB1P37275 1124 aaPredicted RBP26.71■■□□□ 1.87
NEIL2-204ENST00000455213 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
NEIL2-204ENST00000455213 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
NEIL2-204ENST00000455213 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
NEIL2-204ENST00000455213 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
NEIL2-204ENST00000455213 SOGA1O94964 1423 aa26.45■■□□□ 1.83
NEIL2-204ENST00000455213 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
NEIL2-204ENST00000455213 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
NEIL2-204ENST00000455213 EEA1Q15075 1411 aa26.33■■□□□ 1.81
NEIL2-204ENST00000455213 CSRNP3Q8WYN3 585 aa26.28■■□□□ 1.8
NEIL2-204ENST00000455213 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
NEIL2-204ENST00000455213 CFTRP13569 1480 aa26.26■■□□□ 1.79
NEIL2-204ENST00000455213 TOP2BQ02880 1626 aa26.19■■□□□ 1.78
NEIL2-204ENST00000455213 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
NEIL2-204ENST00000455213 TNIKQ9UKE5 1360 aa26.1■■□□□ 1.77
NEIL2-204ENST00000455213 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.76
NEIL2-204ENST00000455213 CUX1P39880 1505 aa26.05■■□□□ 1.76
NEIL2-204ENST00000455213 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
NEIL2-204ENST00000455213 UBTFP17480 764 aaKnown RBP26.03■■□□□ 1.76
NEIL2-204ENST00000455213 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
NEIL2-204ENST00000455213 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
NEIL2-204ENST00000455213 CEP164Q9UPV0 1460 aa25.99■■□□□ 1.75
NEIL2-204ENST00000455213 KIF21BO75037 1637 aa25.97■■□□□ 1.75
NEIL2-204ENST00000455213 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
NEIL2-204ENST00000455213 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
NEIL2-204ENST00000455213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.85■■□□□ 1.73
NEIL2-204ENST00000455213 PELP1Q8IZL8 1130 aaKnown RBP25.83■■□□□ 1.73
NEIL2-204ENST00000455213 SCAF1Q9H7N4 1312 aaKnown RBP25.83■■□□□ 1.72
NEIL2-204ENST00000455213 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
NEIL2-204ENST00000455213 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
NEIL2-204ENST00000455213 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
NEIL2-204ENST00000455213 NESP48681 1621 aa25.74■■□□□ 1.71
NEIL2-204ENST00000455213 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
NEIL2-204ENST00000455213 CLIP1P30622 1438 aa25.7■■□□□ 1.7
NEIL2-204ENST00000455213 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
NEIL2-204ENST00000455213 FGD5Q6ZNL6 1462 aa25.68■■□□□ 1.7
NEIL2-204ENST00000455213 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
NEIL2-204ENST00000455213 CUX2O14529 1486 aa25.63■■□□□ 1.69
NEIL2-204ENST00000455213 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
NEIL2-204ENST00000455213 IGF1RP08069 1367 aa25.57■■□□□ 1.68
NEIL2-204ENST00000455213 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
NEIL2-204ENST00000455213 RANGAP1P46060 587 aaPredicted RBP25.55■■□□□ 1.68
NEIL2-204ENST00000455213 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
NEIL2-204ENST00000455213 DIEXFQ68CQ4 756 aaKnown RBP25.53■■□□□ 1.68
NEIL2-204ENST00000455213 VPS8Q8N3P4 1428 aa25.52■■□□□ 1.68
NEIL2-204ENST00000455213 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
NEIL2-204ENST00000455213 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
NEIL2-204ENST00000455213 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
NEIL2-204ENST00000455213 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
NEIL2-204ENST00000455213 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
NEIL2-204ENST00000455213 ABCA10Q8WWZ4 1543 aa25.43■■□□□ 1.66
NEIL2-204ENST00000455213 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
NEIL2-204ENST00000455213 NEUROD1Q13562 356 aa25.42■■□□□ 1.66
NEIL2-204ENST00000455213 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
NEIL2-204ENST00000455213 ARAP1Q96P48 1450 aa25.37■■□□□ 1.65
NEIL2-204ENST00000455213 KIF21AQ7Z4S6 1674 aa25.33■■□□□ 1.64
NEIL2-204ENST00000455213 APLP2Q06481 763 aa25.31■■□□□ 1.64
NEIL2-204ENST00000455213 ZNF316A6NFI3 1004 aaPredicted RBP25.29■■□□□ 1.64
NEIL2-204ENST00000455213 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
NEIL2-204ENST00000455213 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
NEIL2-204ENST00000455213 GTF3C3Q9Y5Q9 886 aa25.21■■□□□ 1.63
NEIL2-204ENST00000455213 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.62
NEIL2-204ENST00000455213 CUL7Q14999 1698 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms