RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.77
CAPN13-202ENST00000450650 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
CAPN13-202ENST00000450650 SLC24A1O60721 1099 aa18.03■□□□□ 0.48
CAPN13-202ENST00000450650 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
CAPN13-202ENST00000450650 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
CAPN13-202ENST00000450650 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
CAPN13-202ENST00000450650 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
CAPN13-202ENST00000450650 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
CAPN13-202ENST00000450650 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
CAPN13-202ENST00000450650 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
CAPN13-202ENST00000450650 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
CAPN13-202ENST00000450650 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
CAPN13-202ENST00000450650 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
CAPN13-202ENST00000450650 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
CAPN13-202ENST00000450650 ABCC9O60706 1549 aa16.33■□□□□ 0.2
CAPN13-202ENST00000450650 MYT1Q01538 1121 aa16.25■□□□□ 0.19
CAPN13-202ENST00000450650 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
CAPN13-202ENST00000450650 KCNA4P22459 653 aa16.21■□□□□ 0.19
CAPN13-202ENST00000450650 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
CAPN13-202ENST00000450650 AMER1Q5JTC6 1135 aaPredicted RBP16.05■□□□□ 0.16
CAPN13-202ENST00000450650 NACADO15069 1562 aa16.03■□□□□ 0.16
CAPN13-202ENST00000450650 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.15
CAPN13-202ENST00000450650 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.15
CAPN13-202ENST00000450650 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
CAPN13-202ENST00000450650 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
CAPN13-202ENST00000450650 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
CAPN13-202ENST00000450650 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
CAPN13-202ENST00000450650 TTBK1Q5TCY1 1321 aaPredicted RBP15.73■□□□□ 0.11
CAPN13-202ENST00000450650 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
CAPN13-202ENST00000450650 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
CAPN13-202ENST00000450650 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
CAPN13-202ENST00000450650 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
CAPN13-202ENST00000450650 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
CAPN13-202ENST00000450650 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN13-202ENST00000450650 MROH2BQ7Z745 1585 aa15.37■□□□□ 0.05
CAPN13-202ENST00000450650 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
CAPN13-202ENST00000450650 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
CAPN13-202ENST00000450650 WIZO95785 1651 aa15.26■□□□□ 0.03
CAPN13-202ENST00000450650 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
CAPN13-202ENST00000450650 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
CAPN13-202ENST00000450650 ADRA2BP18089 450 aa15.18■□□□□ 0.02
CAPN13-202ENST00000450650 ARXQ96QS3 562 aa15.17■□□□□ 0.02
CAPN13-202ENST00000450650 TULP1O00294 542 aaPredicted RBP15.16■□□□□ 0.02
CAPN13-202ENST00000450650 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
CAPN13-202ENST00000450650 APLP2Q06481 763 aa15.08■□□□□ 0
CAPN13-202ENST00000450650 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
CAPN13-202ENST00000450650 ERICH6Q7L0X2 663 aa15.05■□□□□ -0
CAPN13-202ENST00000450650 TPRNQ4KMQ1 711 aa15.04■□□□□ -0
CAPN13-202ENST00000450650 ZBTB22O15209 634 aa15.03■□□□□ -0
CAPN13-202ENST00000450650 BCANQ96GW7 911 aa14.99□□□□□ -0.01
CAPN13-202ENST00000450650 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
CAPN13-202ENST00000450650 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
CAPN13-202ENST00000450650 CCDC88BA6NC98 1476 aa14.96□□□□□ -0.01
CAPN13-202ENST00000450650 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.02
CAPN13-202ENST00000450650 HRCP23327 699 aa14.94□□□□□ -0.02
CAPN13-202ENST00000450650 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
CAPN13-202ENST00000450650 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
CAPN13-202ENST00000450650 PLCB2Q00722 1185 aa14.88□□□□□ -0.03
CAPN13-202ENST00000450650 BCL11AQ9H165 835 aa14.87□□□□□ -0.03
CAPN13-202ENST00000450650 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
CAPN13-202ENST00000450650 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
CAPN13-202ENST00000450650 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
CAPN13-202ENST00000450650 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
CAPN13-202ENST00000450650 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.05
CAPN13-202ENST00000450650 HOMEZQ8IX15 550 aa14.76□□□□□ -0.05
CAPN13-202ENST00000450650 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
CAPN13-202ENST00000450650 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
CAPN13-202ENST00000450650 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
CAPN13-202ENST00000450650 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
CAPN13-202ENST00000450650 GTF3C3Q9Y5Q9 886 aa14.64□□□□□ -0.07
CAPN13-202ENST00000450650 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
CAPN13-202ENST00000450650 PODXL2Q9NZ53 605 aa14.59□□□□□ -0.07
CAPN13-202ENST00000450650 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
CAPN13-202ENST00000450650 FKBP8Q14318 412 aa14.56□□□□□ -0.08
CAPN13-202ENST00000450650 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
CAPN13-202ENST00000450650 SYNJ1O43426 1573 aa14.52□□□□□ -0.08
CAPN13-202ENST00000450650 CFTRP13569 1480 aa14.52□□□□□ -0.09
CAPN13-202ENST00000450650 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
CAPN13-202ENST00000450650 SOGA1O94964 1423 aa14.47□□□□□ -0.09
CAPN13-202ENST00000450650 EEA1Q15075 1411 aa14.47□□□□□ -0.09
CAPN13-202ENST00000450650 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
CAPN13-202ENST00000450650 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
CAPN13-202ENST00000450650 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
CAPN13-202ENST00000450650 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
CAPN13-202ENST00000450650 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
CAPN13-202ENST00000450650 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
CAPN13-202ENST00000450650 CUX1P39880 1505 aa14.36□□□□□ -0.11
CAPN13-202ENST00000450650 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
CAPN13-202ENST00000450650 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
CAPN13-202ENST00000450650 CENPBP07199 599 aaPredicted RBP14.32□□□□□ -0.12
CAPN13-202ENST00000450650 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
CAPN13-202ENST00000450650 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
CAPN13-202ENST00000450650 NESP48681 1621 aa14.3□□□□□ -0.12
CAPN13-202ENST00000450650 TMEM132AQ24JP5 1023 aa14.3□□□□□ -0.12
CAPN13-202ENST00000450650 GOLGA3Q08378 1498 aa14.29□□□□□ -0.12
CAPN13-202ENST00000450650 FBLN2P98095 1184 aa14.28□□□□□ -0.12
CAPN13-202ENST00000450650 VSIG10Q8N0Z9 540 aa14.28□□□□□ -0.12
CAPN13-202ENST00000450650 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
CAPN13-202ENST00000450650 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
CAPN13-202ENST00000450650 KIF21BO75037 1637 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms