RNA–Protein interactions for RNA: ENST00000450165.6

CDH17-203, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 2,625 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-203ENST00000450165 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
CDH17-203ENST00000450165 AEBP2Q6ZN18 517 aaPredicted RBP15.82■□□□□ 0.12
CDH17-203ENST00000450165 NISCHQ9Y2I1 1504 aa15.08■□□□□ 0
CDH17-203ENST00000450165 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
CDH17-203ENST00000450165 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
CDH17-203ENST00000450165 PLPPR3Q6T4P5 718 aa13.15□□□□□ -0.3
CDH17-203ENST00000450165 CCDC180Q9P1Z9 1646 aa13.01□□□□□ -0.33
CDH17-203ENST00000450165 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
CDH17-203ENST00000450165 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
CDH17-203ENST00000450165 ABCC9O60706 1549 aa12.52□□□□□ -0.41
CDH17-203ENST00000450165 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
CDH17-203ENST00000450165 DCAF1Q9Y4B6 1507 aa12.4□□□□□ -0.42
CDH17-203ENST00000450165 ADRA2BP18089 450 aa12.31□□□□□ -0.44
CDH17-203ENST00000450165 FOXD1Q16676 465 aa12.31□□□□□ -0.44
CDH17-203ENST00000450165 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
CDH17-203ENST00000450165 SUPT5HO00267 1087 aaKnown RBP12.17□□□□□ -0.46
CDH17-203ENST00000450165 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
CDH17-203ENST00000450165 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
CDH17-203ENST00000450165 SCRIBQ14160 1630 aa12.09□□□□□ -0.47
CDH17-203ENST00000450165 NACADO15069 1562 aa12.08□□□□□ -0.48
CDH17-203ENST00000450165 KCNA4P22459 653 aa11.97□□□□□ -0.49
CDH17-203ENST00000450165 DNAJC5BQ9UF47 199 aa11.91□□□□□ -0.5
CDH17-203ENST00000450165 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
CDH17-203ENST00000450165 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
CDH17-203ENST00000450165 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
CDH17-203ENST00000450165 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
CDH17-203ENST00000450165 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.54
CDH17-203ENST00000450165 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
CDH17-203ENST00000450165 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
CDH17-203ENST00000450165 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
CDH17-203ENST00000450165 WIZO95785 1651 aa11.63□□□□□ -0.55
CDH17-203ENST00000450165 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDH17-203ENST00000450165 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
CDH17-203ENST00000450165 HRCP23327 699 aa11.61□□□□□ -0.55
CDH17-203ENST00000450165 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
CDH17-203ENST00000450165 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
CDH17-203ENST00000450165 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
CDH17-203ENST00000450165 CC2D2AQ9P2K1 1620 aa11.47□□□□□ -0.57
CDH17-203ENST00000450165 NCBP3Q53F19 620 aaKnown RBP11.47□□□□□ -0.57
CDH17-203ENST00000450165 SLC4A1APQ9BWU0 796 aaKnown RBP11.46□□□□□ -0.57
CDH17-203ENST00000450165 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
CDH17-203ENST00000450165 EIF4G1Q04637 1599 aaKnown RBP11.4□□□□□ -0.58
CDH17-203ENST00000450165 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
CDH17-203ENST00000450165 CSRNP3Q8WYN3 585 aa11.38□□□□□ -0.59
CDH17-203ENST00000450165 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
CDH17-203ENST00000450165 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
CDH17-203ENST00000450165 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
CDH17-203ENST00000450165 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
CDH17-203ENST00000450165 DNAJC5Q9H3Z4 198 aa11.36□□□□□ -0.59
CDH17-203ENST00000450165 NPM3O75607 178 aaKnown RBP11.34□□□□□ -0.59
CDH17-203ENST00000450165 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
CDH17-203ENST00000450165 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
CDH17-203ENST00000450165 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
CDH17-203ENST00000450165 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
CDH17-203ENST00000450165 CUX2O14529 1486 aa11.24□□□□□ -0.61
CDH17-203ENST00000450165 PPARGC1BQ86YN6 1023 aaKnown RBP11.24□□□□□ -0.61
CDH17-203ENST00000450165 CNKSR2Q8WXI2 1034 aa11.22□□□□□ -0.61
CDH17-203ENST00000450165 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
CDH17-203ENST00000450165 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
CDH17-203ENST00000450165 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
CDH17-203ENST00000450165 HMGXB3Q12766 1538 aa11.15□□□□□ -0.62
CDH17-203ENST00000450165 MSH5O43196 834 aa11.14□□□□□ -0.63
CDH17-203ENST00000450165 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
CDH17-203ENST00000450165 EEA1Q15075 1411 aa11.06□□□□□ -0.64
CDH17-203ENST00000450165 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
CDH17-203ENST00000450165 SOGA1O94964 1423 aa11.06□□□□□ -0.64
CDH17-203ENST00000450165 ZBTB22O15209 634 aa11.05□□□□□ -0.64
CDH17-203ENST00000450165 RUSC2Q8N2Y8 1516 aa11.03□□□□□ -0.64
CDH17-203ENST00000450165 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
CDH17-203ENST00000450165 CEP162Q5TB80 1403 aa10.99□□□□□ -0.65
CDH17-203ENST00000450165 CFTRP13569 1480 aa10.98□□□□□ -0.65
CDH17-203ENST00000450165 TOP2BQ02880 1626 aa10.96□□□□□ -0.65
CDH17-203ENST00000450165 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.65
CDH17-203ENST00000450165 GOLGA3Q08378 1498 aa10.94□□□□□ -0.66
CDH17-203ENST00000450165 KIF21BO75037 1637 aa10.94□□□□□ -0.66
CDH17-203ENST00000450165 BIVM-ERCC5R4GMW8 1640 aa10.94□□□□□ -0.66
CDH17-203ENST00000450165 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
CDH17-203ENST00000450165 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
CDH17-203ENST00000450165 CUX1P39880 1505 aa10.92□□□□□ -0.66
CDH17-203ENST00000450165 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
CDH17-203ENST00000450165 ERCC6Q03468 1493 aa10.9□□□□□ -0.67
CDH17-203ENST00000450165 CEP164Q9UPV0 1460 aa10.89□□□□□ -0.67
CDH17-203ENST00000450165 RNF216Q9NWF9 866 aaPredicted RBP10.88□□□□□ -0.67
CDH17-203ENST00000450165 THOC2Q8NI27 1593 aaKnown RBP10.88□□□□□ -0.67
CDH17-203ENST00000450165 UBTFP17480 764 aaKnown RBP10.88□□□□□ -0.67
CDH17-203ENST00000450165 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
CDH17-203ENST00000450165 LAMC3Q9Y6N6 1575 aa10.85□□□□□ -0.67
CDH17-203ENST00000450165 NESP48681 1621 aa10.82□□□□□ -0.68
CDH17-203ENST00000450165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
CDH17-203ENST00000450165 RAPGEF2Q9Y4G8 1499 aa10.81□□□□□ -0.68
CDH17-203ENST00000450165 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
CDH17-203ENST00000450165 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
CDH17-203ENST00000450165 KIF27Q86VH2 1401 aa10.77□□□□□ -0.68
CDH17-203ENST00000450165 CLIP1P30622 1438 aa10.77□□□□□ -0.69
CDH17-203ENST00000450165 VPS8Q8N3P4 1428 aa10.77□□□□□ -0.69
CDH17-203ENST00000450165 FGD5Q6ZNL6 1462 aa10.77□□□□□ -0.69
CDH17-203ENST00000450165 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
CDH17-203ENST00000450165 PRXQ9BXM0 1461 aa10.76□□□□□ -0.69
CDH17-203ENST00000450165 DMRT2Q9Y5R5 561 aa10.72□□□□□ -0.69
CDH17-203ENST00000450165 DNMBPQ6XZF7 1577 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms